Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|04843
Gene name
Location	scaffold_05:1757601..1758584
Strand	+
Gene length (bp)	983
Transcript length (bp)	861
Coding sequence length (bp)	861
Protein length (aa)	287

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04193	PQ-loop	PQ loop repeat	1.2E-11	157	214

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 15	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	4	26	22
2	38	60	22
3	70	88	18
4	131	153	22
5	158	180	22
6	187	209	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|04843 MSGWLAACAGYVAPLFIVLSPILSYGDQAMSMHRAKSSAGFSLDIPLIMLVASFFRIFYWHGARFDTSLLLQSLI MVGMQVVLLKIALDNRPGPSSKGGESSMPFQQENLLSVQRPFDFWQWRSPKPYWQFLVYLVCVLMAFEVVLAAMP PVYALWSATLGYVGLSVEATLAIPQILANSQARSCKGFRLSVLIAWLGGDALKILWFFTSTTDIPVAFKVCGIFQ AACDCLLGAQYMQYGDGERRITDHPLEEGRWSSAVMVPERPHSRSFSQTKTGVIYSDAEVD*
Coding	>Ophcf2\|04843 ATGAGCGGTTGGCTCGCCGCCTGCGCTGGCTACGTCGCGCCTCTCTTCATCGTCTTGTCGCCTATCCTCTCGTAC GGCGATCAGGCAATGTCGATGCACCGCGCCAAGTCCAGCGCTGGCTTCTCGCTTGATATCCCCCTCATCATGCTC GTCGCCTCCTTCTTCCGCATCTTTTACTGGCACGGAGCCCGCTTCGATACCAGCCTGCTGCTGCAATCGCTCATC ATGGTCGGCATGCAAGTCGTCCTGCTCAAAATCGCCCTCGACAACCGGCCCGGGCCCTCGTCCAAGGGCGGCGAG TCCAGCATGCCCTTTCAACAGGAGAACCTCCTGTCCGTCCAGCGGCCCTTTGACTTTTGGCAATGGCGTTCCCCT AAGCCATACTGGCAATTTCTCGTCTACCTCGTCTGCGTCCTCATGGCCTTCGAAGTCGTCCTAGCCGCCATGCCC CCCGTCTACGCCCTCTGGTCAGCGACGCTAGGCTACGTAGGCCTCTCTGTCGAGGCGACGTTGGCCATCCCCCAG ATCCTGGCCAACTCGCAGGCCCGCTCGTGCAAGGGCTTCCGGCTTTCCGTCCTGATCGCCTGGCTGGGCGGCGAT GCCCTCAAGATTCTCTGGTTCTTCACCTCCACCACCGACATCCCCGTCGCCTTTAAAGTCTGCGGCATCTTCCAG GCTGCCTGCGACTGCCTACTGGGCGCGCAGTACATGCAATACGGCGACGGAGAGCGCCGCATCACGGATCATCCG CTCGAGGAGGGCCGCTGGTCCAGCGCCGTCATGGTGCCTGAGAGGCCTCACAGCCGGAGCTTTTCCCAGACCAAG ACGGGCGTCATCTACTCGGATGCCGAGGTGGATTAG
Transcript	>Ophcf2\|04843 ATGAGCGGTTGGCTCGCCGCCTGCGCTGGCTACGTCGCGCCTCTCTTCATCGTCTTGTCGCCTATCCTCTCGTAC GGCGATCAGGCAATGTCGATGCACCGCGCCAAGTCCAGCGCTGGCTTCTCGCTTGATATCCCCCTCATCATGCTC GTCGCCTCCTTCTTCCGCATCTTTTACTGGCACGGAGCCCGCTTCGATACCAGCCTGCTGCTGCAATCGCTCATC ATGGTCGGCATGCAAGTCGTCCTGCTCAAAATCGCCCTCGACAACCGGCCCGGGCCCTCGTCCAAGGGCGGCGAG TCCAGCATGCCCTTTCAACAGGAGAACCTCCTGTCCGTCCAGCGGCCCTTTGACTTTTGGCAATGGCGTTCCCCT AAGCCATACTGGCAATTTCTCGTCTACCTCGTCTGCGTCCTCATGGCCTTCGAAGTCGTCCTAGCCGCCATGCCC CCCGTCTACGCCCTCTGGTCAGCGACGCTAGGCTACGTAGGCCTCTCTGTCGAGGCGACGTTGGCCATCCCCCAG ATCCTGGCCAACTCGCAGGCCCGCTCGTGCAAGGGCTTCCGGCTTTCCGTCCTGATCGCCTGGCTGGGCGGCGAT GCCCTCAAGATTCTCTGGTTCTTCACCTCCACCACCGACATCCCCGTCGCCTTTAAAGTCTGCGGCATCTTCCAG GCTGCCTGCGACTGCCTACTGGGCGCGCAGTACATGCAATACGGCGACGGAGAGCGCCGCATCACGGATCATCCG CTCGAGGAGGGCCGCTGGTCCAGCGCCGTCATGGTGCCTGAGAGGCCTCACAGCCGGAGCTTTTCCCAGACCAAG ACGGGCGTCATCTACTCGGATGCCGAGGTGGATTAG
Gene	>Ophcf2\|04843 ATGAGCGGTTGGCTCGCCGCCTGCGCTGGCTACGTCGCGCCTCTCTTCATCGTCTTGTCGCCTATCCTCTCGTAC GGCGATCAGGCAATGTCGATGCACCGCGCCAAGTCCAGCGCTGGCTTCTCGCTTGATATCCCCCTCATCATGCTC GTCGCCTCCTTCTTCCGGTCCGTCTCTGCCTCGAGTCCGTGGGAGAAAGTCAGTGGGAGATGGTCATGCTGACTT CTTACAGCATCTTTTACTGGCACGGAGCCCGCTTCGATACCAGCCTGCTGCTGCAATCGCTCATCATGGTCGGCA TGCAAGTCGTCCTGCTCAAAATCGCCCTCGACAACCGGCCCGGGCCCTCGTCCAAGGGCGGCGAGTCCAGCATGC CCTTTCAACAGGAGAACCTCCTGTCCGTCCAGCGGCCCTTTGACTTTTGGCAATGGCGTTCCCCTAAGCCGTGAG TCTCTCCCTCGTCCATATTCCGGCTCGCTCATATCTCCAACTGCTACTCCAGATACTGGCAATTTCTCGTCTACC TCGTCTGCGTCCTCATGGCCTTCGAAGTCGTCCTAGCCGCCATGCCCCCCGTCTACGCCCTCTGGTCAGCGACGC TAGGCTACGTAGGCCTCTCTGTCGAGGCGACGTTGGCCATCCCCCAGATCCTGGCCAACTCGCAGGCCCGCTCGT GCAAGGGCTTCCGGCTTTCCGTCCTGATCGCCTGGCTGGGCGGCGATGCCCTCAAGATTCTCTGGTTCTTCACCT CCACCACCGACATCCCCGTCGCCTTTAAAGTCTGCGGCATCTTCCAGGCTGCCTGCGACTGCCTACTGGGCGCGC AGTACATGCAATACGGCGACGGAGAGCGCCGCATCACGGATCATCCGCTCGAGGAGGGCCGCTGGTCCAGCGCCG TCATGGTGCCTGAGAGGCCTCACAGCCGGAGCTTTTCCCAGACCAAGACGGGCGTCATCTACTCGGATGCCGAGG TGGATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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