Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04808
Gene name
Locationscaffold_05:1640343..1641151
Strand+
Gene length (bp)808
Transcript length (bp)738
Coding sequence length (bp)738
Protein length (aa) 246

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 48 70 22
3 75 94 19
4 106 128 22
5 138 160 22
6 172 191 19
7 206 228 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04808
MDGFSHSQPPQAYLQVQWLADTLVALMGAGWIINYAAMIYHSYHGQTYSMAIIPLCNNIGWELVYTLVFPSPNRV
ELAVFAAGVSLNLVIMAAATRAARTEWRHSPLVAANTPLIFAGGTLLCFTGHLALAAQIGPGLAYSWGAVVCQLV
LSIGGLCQLLQRNSTRGTSWTLWLSRFLGSCCTVGFASLRWKYWPEAFGWLADPLVLWSLAAFVVVDTTYGVCLY
LVSRQQQQQQQSHVHVIKVQ*
Coding >Ophcf2|04808
ATGGACGGCTTCTCCCACTCACAACCCCCCCAAGCCTACCTCCAAGTCCAATGGCTCGCCGACACGCTCGTCGCC
CTCATGGGCGCGGGCTGGATCATCAACTACGCCGCCATGATCTACCACTCCTACCACGGTCAAACCTACAGCATG
GCCATCATCCCCCTCTGCAACAACATCGGCTGGGAACTCGTCTACACCCTCGTCTTCCCGTCCCCCAACAGAGTC
GAGCTGGCCGTCTTCGCCGCAGGTGTAAGCCTCAACCTGGTCATCATGGCGGCTGCTACCCGGGCGGCGAGGACC
GAGTGGCGGCACTCGCCTCTCGTCGCCGCCAACACGCCTCTCATCTTCGCGGGGGGCACGCTGCTGTGCTTCACC
GGTCATCTGGCGCTGGCTGCTCAGATCGGACCCGGGCTGGCTTACTCGTGGGGGGCTGTCGTCTGCCAGCTCGTT
CTCAGCATTGGGGGGCTGTGCCAGCTTCTGCAGCGGAATAGCACGAGGGGGACTTCGTGGACTCTGTGGTTGAGC
CGTTTCCTCGGCTCCTGCTGCACAGTCGGCTTCGCCTCGCTGCGGTGGAAATACTGGCCCGAGGCATTCGGATGG
CTGGCCGATCCGCTGGTGCTCTGGAGCCTGGCTGCATTTGTCGTCGTCGATACCACCTACGGTGTCTGCCTTTAT
CTCGTGTCTCGGCAGCAGCAGCAGCAGCAGCAGAGCCATGTACATGTAATAAAGGTGCAGTGA
Transcript >Ophcf2|04808
ATGGACGGCTTCTCCCACTCACAACCCCCCCAAGCCTACCTCCAAGTCCAATGGCTCGCCGACACGCTCGTCGCC
CTCATGGGCGCGGGCTGGATCATCAACTACGCCGCCATGATCTACCACTCCTACCACGGTCAAACCTACAGCATG
GCCATCATCCCCCTCTGCAACAACATCGGCTGGGAACTCGTCTACACCCTCGTCTTCCCGTCCCCCAACAGAGTC
GAGCTGGCCGTCTTCGCCGCAGGTGTAAGCCTCAACCTGGTCATCATGGCGGCTGCTACCCGGGCGGCGAGGACC
GAGTGGCGGCACTCGCCTCTCGTCGCCGCCAACACGCCTCTCATCTTCGCGGGGGGCACGCTGCTGTGCTTCACC
GGTCATCTGGCGCTGGCTGCTCAGATCGGACCCGGGCTGGCTTACTCGTGGGGGGCTGTCGTCTGCCAGCTCGTT
CTCAGCATTGGGGGGCTGTGCCAGCTTCTGCAGCGGAATAGCACGAGGGGGACTTCGTGGACTCTGTGGTTGAGC
CGTTTCCTCGGCTCCTGCTGCACAGTCGGCTTCGCCTCGCTGCGGTGGAAATACTGGCCCGAGGCATTCGGATGG
CTGGCCGATCCGCTGGTGCTCTGGAGCCTGGCTGCATTTGTCGTCGTCGATACCACCTACGGTGTCTGCCTTTAT
CTCGTGTCTCGGCAGCAGCAGCAGCAGCAGCAGAGCCATGTACATGTAATAAAGGTGCAGTGA
Gene >Ophcf2|04808
ATGGACGGCTTCTCCCACTCACAACCCCCCCAAGCCTACCTCCAAGTCCAATGGCTCGCCGACACGCTCGTCGCC
CTCATGGGCGCGGGCTGGATCATCAACTACGCCGCCATGATCTACCACTCCTACCACGGTCAAACCTACAGCATG
GCCATCATCCCCCTCTGCAACAACATCGGCTGGGAACTCGTCTACACCCTCGTCTTCCCGTCCCCCAACAGAGTC
GAGCTGGCCGTCTTCGCCGCAGGTGTAAGCCTCAACCTGGTCATCATGGCGGCTGCTACCCGGGCGGCGAGGACC
GAGTGGCGGCACTCGCCTCTCGTCGCCGCCAACACGCCTCTCATCTTCGCGGGGGGCACGCTGCTGTGCTTCACC
GGTCATCTGGCGCTGGCTGCTCAGATCGGACCCGGGCTGGCTTACTCGTGGGGGGCTGTCGTCTGCCAGCTCGTT
CTCAGCATTGGGGGGCTGTGCCAGCTTCTGCAGCGGAATAGCACGAGGGGGACTTCGTGGACTCTGTGGTGAGTT
GAACGTGATGGCAACGTGTATCATGACTGGACGCTTTCTCGTCTCTTACAAGTGTACATGCAGGTTGAGCCGTTT
CCTCGGCTCCTGCTGCACAGTCGGCTTCGCCTCGCTGCGGTGGAAATACTGGCCCGAGGCATTCGGATGGCTGGC
CGATCCGCTGGTGCTCTGGAGCCTGGCTGCATTTGTCGTCGTCGATACCACCTACGGTGTCTGCCTTTATCTCGT
GTCTCGGCAGCAGCAGCAGCAGCAGCAGAGCCATGTACATGTAATAAAGGTGCAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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