Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|04806
Gene name
Location	scaffold_05:1636972..1637763
Strand	+
Gene length (bp)	791
Transcript length (bp)	615
Coding sequence length (bp)	615
Protein length (aa)	205

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 16	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	70	92	22
2	113	135	22
3	174	196	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|04806 MSSLALLSLLQLVVAAVGVWSKLRSGFGLVEVPSPARLIEPGCWLEDLGGLIPFAIMVEMISPVRKLRAVSLLGL LSAILGFAAAMPALSLWILQAAEHKALSRRQRSVLGKLAFLSAVTHVGAFVVALSTACLGLDSSPWHVMNSLLSG PDHPGRLPEKALREARLRQINEMTGTSSGFFMAAGLLLLRLEIWLLDLRPEVRW*
Coding	>Ophcf2\|04806 ATGTCGTCGCTTGCTCTTCTGAGCCTCCTTCAGCTGGTGGTGGCGGCCGTCGGCGTCTGGAGCAAGCTGCGGTCT GGCTTCGGGCTGGTAGAGGTGCCGAGTCCGGCTCGTCTGATTGAGCCCGGCTGTTGGCTCGAGGATCTTGGAGGG CTCATCCCGTTTGCCATCATGGTGGAGATGATATCACCGGTCAGGAAGTTGAGAGCCGTCTCCTTACTGGGCTTG CTATCGGCCATCTTGGGCTTCGCCGCCGCCATGCCGGCCCTCTCCCTGTGGATCCTGCAGGCAGCCGAGCACAAG GCCCTCAGCCGGAGACAGAGGTCCGTCCTAGGCAAGCTAGCCTTCCTATCGGCTGTGACGCACGTGGGAGCCTTT GTCGTGGCACTTTCCACGGCCTGTCTCGGCCTCGACTCCAGCCCCTGGCACGTCATGAACAGCCTGCTATCCGGC CCGGACCACCCCGGCCGTCTCCCGGAAAAGGCCTTGCGGGAGGCCCGTCTGCGGCAGATCAACGAGATGACGGGC ACGTCGAGCGGCTTCTTCATGGCGGCCGGCTTGCTGCTGCTCAGGCTGGAGATCTGGTTGCTGGACCTGCGGCCG GAAGTGCGGTGGTGA
Transcript	>Ophcf2\|04806 ATGTCGTCGCTTGCTCTTCTGAGCCTCCTTCAGCTGGTGGTGGCGGCCGTCGGCGTCTGGAGCAAGCTGCGGTCT GGCTTCGGGCTGGTAGAGGTGCCGAGTCCGGCTCGTCTGATTGAGCCCGGCTGTTGGCTCGAGGATCTTGGAGGG CTCATCCCGTTTGCCATCATGGTGGAGATGATATCACCGGTCAGGAAGTTGAGAGCCGTCTCCTTACTGGGCTTG CTATCGGCCATCTTGGGCTTCGCCGCCGCCATGCCGGCCCTCTCCCTGTGGATCCTGCAGGCAGCCGAGCACAAG GCCCTCAGCCGGAGACAGAGGTCCGTCCTAGGCAAGCTAGCCTTCCTATCGGCTGTGACGCACGTGGGAGCCTTT GTCGTGGCACTTTCCACGGCCTGTCTCGGCCTCGACTCCAGCCCCTGGCACGTCATGAACAGCCTGCTATCCGGC CCGGACCACCCCGGCCGTCTCCCGGAAAAGGCCTTGCGGGAGGCCCGTCTGCGGCAGATCAACGAGATGACGGGC ACGTCGAGCGGCTTCTTCATGGCGGCCGGCTTGCTGCTGCTCAGGCTGGAGATCTGGTTGCTGGACCTGCGGCCG GAAGTGCGGTGGTGA
Gene	>Ophcf2\|04806 ATGTCGTCGCTTGCTCTTCTGAGCCTCCTTCAGCTGGTGGTGGCGGCCGTCGGCGTCTGGAGCAAGCTGCGGTCT GGCTTCGGGCTGGTAGAGGTGCCGAGTCCGGCTCGTCTGATTGAGCCCGGCTGTTGGCTCGAGGATCTTGGAGGG GTATCTGTTGTTTTGTTATGGGAACAATGGCCTTGGTTCTCTCTGCATTTGTTTCTCTATCTTGGGCAGCTCATC CCGTTTGCCATCATGGTGGAGATGATATCACCGGTCAGGAAGTTGAGGTAAGTCAAGCCGTTACGAATTCCCGAC AACTACATCAGCTGATCCGTCTTCAAGAGCCGTCTCCTTACTGGGCTTGCTATCGGCCATCTTGGGCTTCGCCGC CGCCATGCCGGCCCTCTCCCTGTGGATCCTGCAGGCAGCCGAGCACAAGGCCCTCAGCCGGAGACAGAGGTCCGT CCTAGGCAAGCTAGCCTTCCTATCGGCTGTGACGCACGTGGGAGCCTTTGTCGTGGCACTTTCCACGGCCTGTCT CGGCCTCGACTCCAGCCCCTGGCACGTCATGAACAGCCTGCTATCCGGCCCGGACCACCCCGGCCGTCTCCCGGA AAAGGCCTTGCGGGAGGCCCGTCTGCGGCAGATCAACGAGATGACGGGCACGTCGAGCGGCTTCTTCATGGCGGC CGGCTTGCTGCTGCTCAGGCTGGAGAGTTGCGGCCGGGGGATGAGCGTCGGGTTGGTGGCCTTGATGTTTCTCGT AAGTCTGGTTGCTGGACCTGCGGCCGGAAGTGCGGTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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