Protein ID | Ophcf2|04804 |
Gene name | |
Location | scaffold_05:1629688..1631491 |
Strand | - |
Gene length (bp) | 1803 |
Transcript length (bp) | 1494 |
Coding sequence length (bp) | 1494 |
Protein length (aa) | 498 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00067 | p450 | Cytochrome P450 | 3.2E-39 | 160 | 471 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Yes |
GO:0020037 | heme binding | Yes |
GO:0005506 | iron ion binding | Yes |
GO:0004497 | monooxygenase activity | Yes |
GO:0043169 | cation binding | No |
GO:0046914 | transition metal ion binding | No |
GO:0046872 | metal ion binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0046906 | tetrapyrrole binding | No |
GO:0003824 | catalytic activity | No |
GO:0043167 | ion binding | No |
GO:0003674 | molecular_function | No |
GO:0016491 | oxidoreductase activity | No |
GO:0005488 | binding | No |
GO:0097159 | organic cyclic compound binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 16 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 5 | 23 | 18 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|04804 MPSSILLVQAPIVCALLFGLLLVELSRRRKGSKIPTIRRWPAPFPEILDRLSYNRNAVHLVREGYKKHKHVPFRL LKMDMDLVVIPLKYAAELRAVTSDKLDPLTASFDDNAGHLTKILLGSELHSDAIHRRLTPGLPRIIPVVVDELKF AFGRVLAQGSKSGSWTAVNPYDMVLDLSTRAAARIFVGEPICRDEQFLQTTASYSRNSFSTIDTFRNLGSVIGLF GRAMSSTVTDARNQLAYVQRLLGDEVTRRRARPDDKHDDFLQWCIDLARTPDESQPESIAHRTLGILSMAVVHTT AMASTHMLFDLVSDPDLLEALREEQRRVLPEGWPCINQKAMLNMRLLDSLMRESQRFNPVGEFTFRRIVRKPIVL SDGYQLQPGQQIAIPAKNLNLDDDIISEADAYNPSRWATQQQASASFAHSSSANLHFGLGRYACPGRFFASYMIK SIMSRLLLEFDIELQGDGSHHRPPNIISGDKILPNRDAVILLRQRGS* |
Coding | >Ophcf2|04804 ATGCCCTCGAGCATCCTCCTCGTCCAGGCGCCCATCGTCTGCGCCCTTCTCTTCGGCCTGCTACTTGTCGAACTC AGCCGGCGAAGAAAGGGTAGTAAGATTCCTACCATCAGACGGTGGCCAGCCCCCTTCCCCGAGATCCTCGACCGT CTCAGCTACAACCGGAATGCCGTCCATCTCGTCAGAGAGGGATACAAAAAGCACAAACATGTCCCGTTCAGACTC CTCAAGATGGACATGGACTTGGTCGTCATCCCGCTCAAGTATGCCGCCGAGCTGCGGGCCGTCACGAGCGACAAG CTGGATCCCCTGACGGCCAGCTTCGACGACAACGCCGGCCATCTCACCAAGATCCTCCTGGGAAGCGAGCTGCAC TCGGATGCCATTCACCGGCGTCTGACTCCGGGGCTTCCGCGTATCATTCCCGTCGTCGTCGACGAGCTCAAGTTT GCCTTTGGTCGTGTCCTGGCCCAGGGATCCAAGTCCGGCTCATGGACAGCCGTGAACCCGTATGACATGGTCCTC GACCTCTCGACCCGCGCCGCAGCAAGAATCTTCGTCGGCGAGCCCATCTGCCGCGACGAACAGTTCCTCCAAACA ACAGCCTCCTACAGCCGCAACAGCTTCAGCACCATCGACACGTTCCGCAACCTCGGCAGCGTCATCGGCCTCTTC GGCCGCGCCATGAGCTCTACAGTGACCGACGCCCGGAATCAACTGGCTTACGTTCAGCGCCTTCTCGGCGATGAA GTTACGAGGAGAAGAGCTCGGCCAGACGATAAGCATGACGACTTCCTCCAGTGGTGTATAGATCTGGCTCGTACC CCGGATGAGTCTCAGCCCGAGTCGATAGCTCATCGTACGCTCGGGATTCTCAGCATGGCTGTTGTTCATACCACG GCCATGGCTTCGACTCATATGCTCTTCGACCTCGTCTCTGATCCAGACTTGTTAGAGGCTCTGAGGGAAGAACAG AGACGCGTCTTGCCCGAGGGTTGGCCTTGCATCAACCAAAAGGCCATGCTGAACATGAGACTTCTCGACAGCTTG ATGAGGGAGTCTCAGCGCTTCAACCCGGTGGGCGAGTTCACCTTCCGGCGCATCGTGAGGAAGCCCATCGTCCTA TCCGACGGCTACCAGCTACAACCGGGTCAGCAAATCGCCATCCCGGCCAAGAACCTCAACCTCGACGACGACATC ATCTCCGAGGCCGACGCCTATAATCCGTCCCGCTGGGCAACTCAGCAGCAGGCCTCGGCCTCGTTTGCCCACAGC AGCTCGGCCAACCTCCACTTTGGTCTCGGTCGATATGCTTGCCCGGGACGCTTCTTTGCCTCGTACATGATCAAA TCCATCATGAGTCGCCTCCTTCTGGAGTTCGACATTGAACTACAAGGAGACGGAAGCCATCATCGTCCGCCAAAC ATCATCTCCGGAGACAAGATTCTTCCCAACCGGGATGCCGTCATTCTTCTCCGCCAGCGCGGTAGTTGA |
Transcript | >Ophcf2|04804 ATGCCCTCGAGCATCCTCCTCGTCCAGGCGCCCATCGTCTGCGCCCTTCTCTTCGGCCTGCTACTTGTCGAACTC AGCCGGCGAAGAAAGGGTAGTAAGATTCCTACCATCAGACGGTGGCCAGCCCCCTTCCCCGAGATCCTCGACCGT CTCAGCTACAACCGGAATGCCGTCCATCTCGTCAGAGAGGGATACAAAAAGCACAAACATGTCCCGTTCAGACTC CTCAAGATGGACATGGACTTGGTCGTCATCCCGCTCAAGTATGCCGCCGAGCTGCGGGCCGTCACGAGCGACAAG CTGGATCCCCTGACGGCCAGCTTCGACGACAACGCCGGCCATCTCACCAAGATCCTCCTGGGAAGCGAGCTGCAC TCGGATGCCATTCACCGGCGTCTGACTCCGGGGCTTCCGCGTATCATTCCCGTCGTCGTCGACGAGCTCAAGTTT GCCTTTGGTCGTGTCCTGGCCCAGGGATCCAAGTCCGGCTCATGGACAGCCGTGAACCCGTATGACATGGTCCTC GACCTCTCGACCCGCGCCGCAGCAAGAATCTTCGTCGGCGAGCCCATCTGCCGCGACGAACAGTTCCTCCAAACA ACAGCCTCCTACAGCCGCAACAGCTTCAGCACCATCGACACGTTCCGCAACCTCGGCAGCGTCATCGGCCTCTTC GGCCGCGCCATGAGCTCTACAGTGACCGACGCCCGGAATCAACTGGCTTACGTTCAGCGCCTTCTCGGCGATGAA GTTACGAGGAGAAGAGCTCGGCCAGACGATAAGCATGACGACTTCCTCCAGTGGTGTATAGATCTGGCTCGTACC CCGGATGAGTCTCAGCCCGAGTCGATAGCTCATCGTACGCTCGGGATTCTCAGCATGGCTGTTGTTCATACCACG GCCATGGCTTCGACTCATATGCTCTTCGACCTCGTCTCTGATCCAGACTTGTTAGAGGCTCTGAGGGAAGAACAG AGACGCGTCTTGCCCGAGGGTTGGCCTTGCATCAACCAAAAGGCCATGCTGAACATGAGACTTCTCGACAGCTTG ATGAGGGAGTCTCAGCGCTTCAACCCGGTGGGCGAGTTCACCTTCCGGCGCATCGTGAGGAAGCCCATCGTCCTA TCCGACGGCTACCAGCTACAACCGGGTCAGCAAATCGCCATCCCGGCCAAGAACCTCAACCTCGACGACGACATC ATCTCCGAGGCCGACGCCTATAATCCGTCCCGCTGGGCAACTCAGCAGCAGGCCTCGGCCTCGTTTGCCCACAGC AGCTCGGCCAACCTCCACTTTGGTCTCGGTCGATATGCTTGCCCGGGACGCTTCTTTGCCTCGTACATGATCAAA TCCATCATGAGTCGCCTCCTTCTGGAGTTCGACATTGAACTACAAGGAGACGGAAGCCATCATCGTCCGCCAAAC ATCATCTCCGGAGACAAGATTCTTCCCAACCGGGATGCCGTCATTCTTCTCCGCCAGCGCGGTAGTTGA |
Gene | >Ophcf2|04804 ATGCCCTCGAGCATCCTCCTCGTCCAGGCGCCCATCGTCTGCGCCCTTCTCTTCGGCCTGCTACTTGTCGAACTC AGCCGGCGAAGAAAGGGTAGTAAGATTCCTACCATCAGACGGTGGCCAGCCCCCTTCCCCGAGATCCTCGACCGT CTCAGCTACAACCGGAATGCCGTCCATCTCGTCAGAGAGGGATACAAAAAGGTATCTTTTTCTTCACCCGAGTTG ACTCACGTTTCCTCTCCTAAACTTGTCGTCTTCAGCACAAACATGTCCCGTTCAGACTCCTCAAGATGGACATGG ACTTGGTCGTCATCCCGCTCAAGTATGCCGCCGAGCTGCGGGCCGTCACGAGCGACAAGCTGGATCCCCTGACGG CCAGCTTCGACGACAACGCCGGCCATCTCACCAAGATCCTCCTGGGAAGCGAGCTGCACTCGGATGCCATTCACC GGCGTCTGACTCCGGGGCTTCGTATGTCAGACCTCTTTTTCAGGAGGTGAGCTGTCTCTGACTCGTGTACATAGC GCGTATCATTCCCGTCGTCGTCGACGAGCTCAAGTTTGCCTTTGGTCGTGTCCTGGCCCAGGGATCCAAGTCCGG TAAGTCCAACAGCCTCGTCATTAACCAGACGACTTATTCTTCCATCCCACAGGCTCATGGACAGCCGTGAACCCG TATGACATGGTCCTCGACCTCTCGACCCGCGCCGCAGCAAGAATCTTCGTCGGCGAGCCCATCTGCCGCGACGAA CAGTTCCTCCAAACAACAGCCTCCTACAGCCGCAACAGCTTCAGCACCATCGACACGTTCCGCAACCTCGGCAGC GTCATCGGCCTCTTCGGCCGCGCCATGAGCTCTACAGTGACCGACGCCCGGAATCAACTGGCTTACGTTCAGCGC CTTCTCGGCGATGAAGTTACGAGGAGAAGAGCTCGGCCAGACGATAAGCATGACGACTTCCTCCAGTGGTGTATA GATCTGGCTCGTACCCCGGATGAGTCTCAGCCCGAGTCGATAGCTCATCGTACGCTCGGGATTCTCAGCATGGCT GTTGTTCATACCACGGCCATGGCTTCGACTCATATGCTCTTCGACCTCGTCTCTGATCCAGACTTGTTAGAGGCT CTGAGGGAAGAACAGAGACGCGTCTTGCCCGAGGGTTGGCCTTGCATCAACCAAAAGGCCATGCTGAACATGAGA CTTCTCGACAGCTTGATGAGGGAGTCTCAGCGCTTCAACCCGGTGGGCGAGTGTAAGCTGCCACCATCTCCGTGT GATACGCTCCCCGTATGTTCCTCGTTGTAAACTAATCTTATAGTCACCTTCCGGCGCATCGTGAGGAAGCCCATC GTCCTATCCGACGGCTACCAGCTACAACCGGGTCAGCAAATCGCCATCCCGGCCAAGAACCTCAACCTCGACGAC GACATCATCTCCGAGGCCGACGCCTATAATCCGTCCCGCTGGGCAACTCAGCAGCAGGCCTCGGCCTCGTTTGCC CACAGCAGCTCGGCCAACCTCCACTTTGGTCTCGGTCGATATGCTTGCCCGGGACGCTTCTTTGCCTCGGTACGT GTCTTTCTGAGGAGAATACACGTACATGTCAAAGTCTATGTTATTGAATGCTTACTTGGCTATGTGGTTTAGTAC ATGATCAAATCCATCATGAGTCGCCTCCTTCTGGAGTTCGACATTGAACTACAAGGAGACGGAAGCCATCATCGT CCGCCAAACATCATCTCCGGAGACAAGATTCTTCCCAACCGGGATGCCGTCATTCTTCTCCGCCAGCGCGGTAGT TGA |