© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|04794 |
| Gene name | |
| Location | scaffold_05:1602502..1604264 |
| Strand | - |
| Gene length (bp) | 1762 |
| Transcript length (bp) | 1428 |
| Coding sequence length (bp) | 1428 |
| Protein length (aa) | 476 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08321 | PPP5 | PPP5 TPR repeat region | 5.8E-33 | 113 | 203 |
| PF00149 | Metallophos | Calcineurin-like phosphoesterase | 6.4E-29 | 212 | 405 |
| PF00515 | TPR_1 | Tetratricopeptide repeat | 9.1E-07 | 73 | 106 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 3.4E-02 | 74 | 106 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016787 | hydrolase activity | Yes |
| GO:0005515 | protein binding | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 32 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 136.15 | 75.97 | 196.34 |
| Alive | In ants, during behavior modification | 68.03 | 34.37 | 101.69 |
| Dead | In ants, recently dead | 70.66 | 40.57 | 100.75 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.000238 | yes |
| Alive | Dead | 0.865419 | no |
| Dead | Fungus | 0.000454 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|04794 MSPEAVNLKNQGNKAFAAGDFPAAVIFYTKAINLDDKEPTFFTNRAQAHIKAEAYGYAISDAGKAIELNPKLVKA YYRRGLARTAILKPKDAIEDFKECVKLDPNNKDARLKLEECKKIVRQLAFFAAIEIGDEPSAAEGLDLDSMVVED DYDGVRLEREMTQEFIDDMMERFKNGKKIHRKYVYQIVIAVKRIVYEEATMVEMEIPDDVQLTVCGDTHGQYFDL MELFRRNGLPTERHWYLFNGDFVDRGSWSTEIALLLYAFKWLRPNCFFLNRGNHETDDMNRVYGFEGECKAKYNE RVFKLFSESFSALPLATLVGKKYLVLHGGLFSDDNITLDDIRKLNRHNQRQPGQSGLMMEMLWTDPQEDQGRGPS KRGVGMQFGPDVTRRFCDRNGLEAVIRSHEVRMDGYEVQHDGKCITVFSAPKYCDSTENRGAYINIGPDYKLHYE QFDAVPHPDIRPMAYAQNSLMSSLM* |
| Coding | >Ophcf2|04794 ATGTCGCCAGAAGCCGTCAACTTGAAGAATCAGGGGAACAAGGCATTCGCAGCAGGCGATTTCCCAGCTGCCGTC ATCTTCTACACCAAGGCTATCAATCTTGACGACAAAGAGCCGACCTTCTTCACGAACCGAGCTCAAGCTCACATC AAAGCTGAAGCCTACGGGTATGCCATCTCCGACGCTGGAAAGGCTATCGAGTTGAATCCAAAACTCGTCAAGGCA TATTATCGTCGAGGTCTTGCTCGTACGGCCATCCTCAAACCGAAAGATGCAATAGAAGACTTTAAAGAATGCGTC AAGTTGGATCCGAACAACAAAGATGCACGTCTGAAGCTGGAAGAGTGCAAAAAGATTGTGCGCCAACTGGCCTTC TTTGCCGCCATCGAGATCGGAGATGAACCTTCTGCAGCCGAGGGCCTCGACTTGGATTCCATGGTTGTCGAGGAC GACTATGATGGTGTGCGACTCGAGCGCGAAATGACGCAAGAATTCATCGACGACATGATGGAGAGATTCAAGAAT GGAAAGAAGATTCACCGCAAATATGTCTACCAAATCGTCATCGCCGTTAAGCGAATCGTCTACGAAGAGGCGACA ATGGTCGAGATGGAGATACCCGATGATGTCCAGCTCACTGTTTGCGGCGACACTCATGGTCAATATTTCGACCTG ATGGAGCTCTTCCGGCGGAACGGACTTCCAACAGAGAGACATTGGTATCTCTTCAACGGCGATTTCGTAGATCGT GGATCCTGGTCTACAGAGATCGCCCTTCTACTGTATGCCTTCAAGTGGCTGCGTCCCAACTGCTTCTTCCTCAAC AGAGGCAATCACGAGACGGACGACATGAACCGCGTCTATGGGTTTGAGGGAGAGTGCAAAGCCAAGTACAACGAG CGCGTTTTCAAACTTTTCTCAGAGAGCTTCTCTGCCTTACCCTTGGCGACGTTGGTCGGCAAGAAATATCTGGTC CTCCACGGCGGCCTGTTTTCCGATGATAACATTACGCTCGACGACATCCGCAAGCTGAACAGGCACAACCAGAGA CAGCCAGGCCAATCGGGCCTGATGATGGAAATGCTGTGGACAGATCCTCAAGAGGACCAAGGCCGTGGACCGAGC AAGCGAGGCGTCGGCATGCAATTCGGACCCGACGTCACCCGGCGTTTCTGCGACAGGAATGGCCTCGAAGCCGTC ATTCGCAGCCACGAAGTACGCATGGACGGCTACGAGGTGCAGCACGATGGGAAATGCATCACGGTTTTCTCGGCC CCCAAGTACTGTGACTCGACTGAGAATCGGGGTGCTTATATCAACATCGGCCCCGACTACAAGCTTCATTACGAG CAGTTTGACGCAGTGCCTCATCCGGACATTCGCCCTATGGCTTACGCGCAAAATTCTCTCATGTCGTCACTGATG TGA |
| Transcript | >Ophcf2|04794 ATGTCGCCAGAAGCCGTCAACTTGAAGAATCAGGGGAACAAGGCATTCGCAGCAGGCGATTTCCCAGCTGCCGTC ATCTTCTACACCAAGGCTATCAATCTTGACGACAAAGAGCCGACCTTCTTCACGAACCGAGCTCAAGCTCACATC AAAGCTGAAGCCTACGGGTATGCCATCTCCGACGCTGGAAAGGCTATCGAGTTGAATCCAAAACTCGTCAAGGCA TATTATCGTCGAGGTCTTGCTCGTACGGCCATCCTCAAACCGAAAGATGCAATAGAAGACTTTAAAGAATGCGTC AAGTTGGATCCGAACAACAAAGATGCACGTCTGAAGCTGGAAGAGTGCAAAAAGATTGTGCGCCAACTGGCCTTC TTTGCCGCCATCGAGATCGGAGATGAACCTTCTGCAGCCGAGGGCCTCGACTTGGATTCCATGGTTGTCGAGGAC GACTATGATGGTGTGCGACTCGAGCGCGAAATGACGCAAGAATTCATCGACGACATGATGGAGAGATTCAAGAAT GGAAAGAAGATTCACCGCAAATATGTCTACCAAATCGTCATCGCCGTTAAGCGAATCGTCTACGAAGAGGCGACA ATGGTCGAGATGGAGATACCCGATGATGTCCAGCTCACTGTTTGCGGCGACACTCATGGTCAATATTTCGACCTG ATGGAGCTCTTCCGGCGGAACGGACTTCCAACAGAGAGACATTGGTATCTCTTCAACGGCGATTTCGTAGATCGT GGATCCTGGTCTACAGAGATCGCCCTTCTACTGTATGCCTTCAAGTGGCTGCGTCCCAACTGCTTCTTCCTCAAC AGAGGCAATCACGAGACGGACGACATGAACCGCGTCTATGGGTTTGAGGGAGAGTGCAAAGCCAAGTACAACGAG CGCGTTTTCAAACTTTTCTCAGAGAGCTTCTCTGCCTTACCCTTGGCGACGTTGGTCGGCAAGAAATATCTGGTC CTCCACGGCGGCCTGTTTTCCGATGATAACATTACGCTCGACGACATCCGCAAGCTGAACAGGCACAACCAGAGA CAGCCAGGCCAATCGGGCCTGATGATGGAAATGCTGTGGACAGATCCTCAAGAGGACCAAGGCCGTGGACCGAGC AAGCGAGGCGTCGGCATGCAATTCGGACCCGACGTCACCCGGCGTTTCTGCGACAGGAATGGCCTCGAAGCCGTC ATTCGCAGCCACGAAGTACGCATGGACGGCTACGAGGTGCAGCACGATGGGAAATGCATCACGGTTTTCTCGGCC CCCAAGTACTGTGACTCGACTGAGAATCGGGGTGCTTATATCAACATCGGCCCCGACTACAAGCTTCATTACGAG CAGTTTGACGCAGTGCCTCATCCGGACATTCGCCCTATGGCTTACGCGCAAAATTCTCTCATGTCGTCACTGATG TGA |
| Gene | >Ophcf2|04794 ATGTCGCCAGAAGCCGTCAACTTGAAGAATCAGGGGAACAAGGCATTCGCAGCAGGCGATTTCCCAGCTGCCGTC ATCTTCTACACCAAGGCTATCAATCTTGACGACAAAGAGCCGACCTTCTTCACGAACCGAGCTCAAGTATGTGTC GAATGAAATAATCGCTCAGCTCGAGTTCGGCGTGGCAGATCTGACGTCTTTAGGCTCACATCAAAGCTGAAGCCT ACGGGTATGCCATCTCCGACGCTGGAAAGGCTATCGAGTTGAATCCAAAACTCGTCAAGGTAAGCCTTTACCGTC AGAACAGTGCCTGGCTCGGCCCAACAGCTCGCAGGCATATTATCGTCGAGGTCTTGCTCGTACGGCCATCCTCAA ACCGAAAGATGCAATAGAAGACTTTAAAGAATGCGTCAAGTTGGATCCGAACAACAAAGATGCACGTCTGAAGCT GGAAGAGTGCAAAAAGATTGTGCGCCAACTGGCCTTCTTTGCCGCCATCGAGATCGGAGATGAACCTTCTGCAGC CGAGGGCCTCGACTTGGATTCCATGGTTGTCGAGGACGACTATGATGGTGTGCGACTCGAGCGCGAAATGACGCA AGAATTCATCGACGACATGATGGAGAGATTCAAGAATGGAAAGAAGATTCACCGCAAATATGTCTACCAAATCGT CATCGCCGTTAAGCGAATCGTCTACGAAGAGGCGACAATGGTCGAGATGGAGATACCCGATGATGTCCAGCTCAC TGTTTGCGGCGACACTCATGGTCAGATTAGGAGCTTCTCTCTTCTTTGTCGAGCACTGGCTAATCCCTATATAGG TCAATATTTCGACCTGATGGAGCTCTTCCGGCGGAACGGACTTCCAACAGAGAGACATTGGTATCTCTTCAACGG CGATTTCGTAGATCGTGGATCCTGGTCTACAGAGATCGCCCTTCTACTGTATGCCTTCAAGTGGCTGCGTCCCAA CTGCTTCTTCCTCAACAGAGGCAATCACGAGACGGACGACATGAACCGCGTCTATGGGTTTGAGGGAGAGTGCAA AGCCAAGTACAACGAGCGGTGGGTACCTCCCCAGCGGCTACCCGCACGGAAACGCGGTCACTGACTGGCAAGCAG CGTTTTCAAACTTTTCTCAGAGAGCTTCTCTGCCTTACCCTTGGCGACGTTGGTCGGCAAGAAATATCTGGTCCT CCACGGCGGCCTGTTTTCCGATGATAACATTACGCTCGACGACATCCGCAAGCTGAACAGGCACAACCAGAGACA GCCAGGCCAATCGGGCCTGATGATGGAAATGCTGTGGACAGATCCTCAAGAGGACCAAGGCCGTGGACCGAGCAA GCGAGGCGTCGGCATGCAATTCGGACCCGACGTCACCCGGCGTTTCTGCGACAGGAATGGCCTCGAAGCCGTCAT TCGCAGCCACGAAGTACGCATGGACGGCTACGAGGTGCAGCACGATGGGAAATGCATCACGGGTGCGCCATAGCG ATGTCTCGGTTCTCCAGGATGATTTCACTGACAGCTTGCCCTAGTTTTCTCGGCCCCCAAGTACTGTGACTCGAC TGAGAATCGGGGTGCTTATATCAACATCGGCCCCGACTACAAGCTTCATTACGAGCAGTTTGACGCAGTGCCTCA TCCGGACATTCGCCCTATGGTATGCGATGGCCCTTGAACCGTCTCCTCCATCGTCGACTGACCATTTCGCCAGGC TTACGCGCAAAATTCTCTCATGTCGTCACTGATGTGA |