Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04792
Gene name
Locationscaffold_05:1601179..1601654
Strand-
Gene length (bp)475
Transcript length (bp)369
Coding sequence length (bp)369
Protein length (aa) 123

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06093 Spt4 Spt4/RpoE2 zinc finger 1.1E-31 14 91

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.6721 0.763 0.0161 0.0272 0.4288 0.021 0.1466 0.2484 0.1014 0.0447

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup4777
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1836
Ophiocordyceps australis map64 (Brazil) OphauB2|7379
Ophiocordyceps camponoti-floridani Ophcf2|04792 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|50
Ophiocordyceps subramaniannii Hirsu2|10146

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04792
MPSSFVTPGQQRYLRACMVCSIVMTYSRFRDEGCPNCDEFLHLAGSQDQIESCTSQVFEGLITLANPAKSWIAKW
QRLDGYVGGVYAIKVSGQLPDEIRTALEDEYRIQYIPRDGTQTEADA*
Coding >Ophcf2|04792
ATGCCATCCAGCTTCGTAACACCAGGACAACAGCGCTATCTGCGAGCCTGCATGGTGTGCTCCATCGTCATGACC
TATAGCCGCTTCCGCGACGAAGGCTGCCCCAACTGCGACGAATTCCTCCACCTAGCCGGCTCACAAGACCAGATC
GAAAGCTGCACGTCGCAGGTCTTCGAGGGTCTCATCACGCTCGCCAATCCGGCCAAGTCGTGGATTGCAAAGTGG
CAGCGTCTGGACGGATACGTCGGTGGTGTCTACGCCATCAAGGTCTCGGGCCAGCTGCCGGATGAGATTCGGACT
GCGCTGGAGGATGAGTATCGAATACAGTATATTCCGAGGGATGGTACTCAGACCGAGGCGGATGCCTAG
Transcript >Ophcf2|04792
ATGCCATCCAGCTTCGTAACACCAGGACAACAGCGCTATCTGCGAGCCTGCATGGTGTGCTCCATCGTCATGACC
TATAGCCGCTTCCGCGACGAAGGCTGCCCCAACTGCGACGAATTCCTCCACCTAGCCGGCTCACAAGACCAGATC
GAAAGCTGCACGTCGCAGGTCTTCGAGGGTCTCATCACGCTCGCCAATCCGGCCAAGTCGTGGATTGCAAAGTGG
CAGCGTCTGGACGGATACGTCGGTGGTGTCTACGCCATCAAGGTCTCGGGCCAGCTGCCGGATGAGATTCGGACT
GCGCTGGAGGATGAGTATCGAATACAGTATATTCCGAGGGATGGTACTCAGACCGAGGCGGATGCCTAG
Gene >Ophcf2|04792
ATGCCATCCAGCTTCGTAACACCAGGACAACAGCGCTATCTGCGAGCCTGCATGGTGTGCTCCATCGTCATGACC
TATAGCGTTCGTCTCCCCCAACATCCCAAAACTCATCATCTAACGCGCAAGTCCTCCAGCGCTTCCGCGACGAAG
GCTGCCCCAACTGCGACGAATTCCTCCACCTAGCCGGCTCACAAGACCAGATCGAAAGCTGCACGTCGCAGGTCT
TCGAGGGTCTCATCACGCTCGCCAATCCGGCCAAGTCGTGGATTGCAAAGTGGCAGCGTCTGGACGGATACGTCG
GTGGTGTCTACGCCATCAAGGTCTCGGGCCAGCTGCCGGATGAGATTCGGACTGCGCTGGAGGATGAGTATCGAA
TACAGTATATTCCGTACGTTTGTTCACTCTGGCCGCGTGAGCTGTGTGTGAGGCTGACTTGTGTAGGAGGGATGG
TACTCAGACCGAGGCGGATGCCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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