Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04790
Gene name
Locationscaffold_05:1598692..1599553
Strand-
Gene length (bp)861
Transcript length (bp)861
Coding sequence length (bp)861
Protein length (aa) 287

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04502 Saf4_Yju2 Saf4/Yju2 protein 1.6E-62 9 282

GO

GO Term Description Terminal node
GO:0000398 mRNA splicing, via spliceosome Yes
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile No
GO:0006397 mRNA processing No
GO:0044237 cellular metabolic process No
GO:0006396 RNA processing No
GO:0009987 cellular process No
GO:0008152 metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0000375 RNA splicing, via transesterification reactions No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0043170 macromolecule metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0044238 primary metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0016070 RNA metabolic process No
GO:0008380 RNA splicing No
GO:0090304 nucleic acid metabolic process No
GO:0016071 mRNA metabolic process No
GO:0008150 biological_process No
GO:0034641 cellular nitrogen compound metabolic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.3503 0.9191 0.0033 0.0477 0.0617 0.0051 0.0216 0.0139 0.0074 0.0029

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup1112
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1834
Ophiocordyceps australis map64 (Brazil) OphauB2|7381
Ophiocordyceps camponoti-floridani Ophcf2|04790 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|48
Ophiocordyceps kimflemingae Ophio5|827
Ophiocordyceps subramaniannii Hirsu2|10144

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04790
MSERKVLQKYYPPGFDPRELTRRRGPKSTGPRIQTVRIMAPFSMRCMTCGEFIYRGRKFNARKETNVQEKYLGIQ
IIFLHIKCTRCSAEITFRTDPKNRDYAMVKGAVRNMEPWRNREAENETMEQRLDRLEKEEAEAAGEEEKNAMADL
EAKNDDARREMAVADALDEIRLRNARINQSEKDDVNFADAIVRAEDEERARQEREDEEAAKRAFATTEAETEWQV
MDDDVTDGGSSSSSQPRSGSKIATTSVNSRARSPEVSFKRIVKKKKDHAALLGIKKKPSLV*
Coding >Ophcf2|04790
ATGTCCGAGCGCAAAGTGCTACAGAAGTACTACCCTCCGGGATTCGATCCCCGGGAACTCACACGGCGACGTGGC
CCGAAGTCGACTGGGCCTCGAATCCAGACGGTCCGCATCATGGCGCCGTTTTCCATGCGTTGTATGACTTGCGGC
GAGTTCATCTACAGGGGCCGCAAGTTCAACGCGCGAAAGGAAACAAACGTACAGGAGAAGTACCTGGGCATTCAA
ATTATCTTTCTGCATATCAAGTGCACTCGATGCAGCGCAGAAATCACCTTCCGAACCGACCCCAAGAATCGCGAC
TATGCCATGGTCAAGGGAGCCGTGCGCAATATGGAACCGTGGAGGAACCGCGAGGCGGAGAATGAAACGATGGAG
CAGAGACTGGACAGGCTGGAAAAGGAGGAAGCCGAGGCGGCGGGCGAAGAGGAGAAGAACGCCATGGCAGATCTC
GAGGCTAAGAATGACGATGCCAGACGCGAAATGGCTGTAGCGGATGCTCTCGACGAGATACGGCTGAGAAACGCT
CGGATCAACCAGTCTGAAAAGGACGACGTTAATTTCGCCGACGCCATCGTTCGAGCTGAAGACGAAGAGCGCGCT
CGGCAGGAGCGGGAGGATGAGGAAGCGGCGAAGAGAGCGTTCGCCACAACAGAGGCTGAAACTGAGTGGCAAGTT
ATGGATGACGATGTCACGGATGGCGGTTCATCAAGCAGTTCTCAGCCAAGGAGTGGATCGAAAATTGCAACAACG
TCCGTCAACTCTCGTGCTAGATCGCCAGAGGTGTCGTTTAAGCGAATCGTCAAGAAGAAAAAGGATCACGCAGCG
TTGCTAGGGATCAAGAAGAAGCCATCCCTTGTATGA
Transcript >Ophcf2|04790
ATGTCCGAGCGCAAAGTGCTACAGAAGTACTACCCTCCGGGATTCGATCCCCGGGAACTCACACGGCGACGTGGC
CCGAAGTCGACTGGGCCTCGAATCCAGACGGTCCGCATCATGGCGCCGTTTTCCATGCGTTGTATGACTTGCGGC
GAGTTCATCTACAGGGGCCGCAAGTTCAACGCGCGAAAGGAAACAAACGTACAGGAGAAGTACCTGGGCATTCAA
ATTATCTTTCTGCATATCAAGTGCACTCGATGCAGCGCAGAAATCACCTTCCGAACCGACCCCAAGAATCGCGAC
TATGCCATGGTCAAGGGAGCCGTGCGCAATATGGAACCGTGGAGGAACCGCGAGGCGGAGAATGAAACGATGGAG
CAGAGACTGGACAGGCTGGAAAAGGAGGAAGCCGAGGCGGCGGGCGAAGAGGAGAAGAACGCCATGGCAGATCTC
GAGGCTAAGAATGACGATGCCAGACGCGAAATGGCTGTAGCGGATGCTCTCGACGAGATACGGCTGAGAAACGCT
CGGATCAACCAGTCTGAAAAGGACGACGTTAATTTCGCCGACGCCATCGTTCGAGCTGAAGACGAAGAGCGCGCT
CGGCAGGAGCGGGAGGATGAGGAAGCGGCGAAGAGAGCGTTCGCCACAACAGAGGCTGAAACTGAGTGGCAAGTT
ATGGATGACGATGTCACGGATGGCGGTTCATCAAGCAGTTCTCAGCCAAGGAGTGGATCGAAAATTGCAACAACG
TCCGTCAACTCTCGTGCTAGATCGCCAGAGGTGTCGTTTAAGCGAATCGTCAAGAAGAAAAAGGATCACGCAGCG
TTGCTAGGGATCAAGAAGAAGCCATCCCTTGTATGA
Gene >Ophcf2|04790
ATGTCCGAGCGCAAAGTGCTACAGAAGTACTACCCTCCGGGATTCGATCCCCGGGAACTCACACGGCGACGTGGC
CCGAAGTCGACTGGGCCTCGAATCCAGACGGTCCGCATCATGGCGCCGTTTTCCATGCGTTGTATGACTTGCGGC
GAGTTCATCTACAGGGGCCGCAAGTTCAACGCGCGAAAGGAAACAAACGTACAGGAGAAGTACCTGGGCATTCAA
ATTATCTTTCTGCATATCAAGTGCACTCGATGCAGCGCAGAAATCACCTTCCGAACCGACCCCAAGAATCGCGAC
TATGCCATGGTCAAGGGAGCCGTGCGCAATATGGAACCGTGGAGGAACCGCGAGGCGGAGAATGAAACGATGGAG
CAGAGACTGGACAGGCTGGAAAAGGAGGAAGCCGAGGCGGCGGGCGAAGAGGAGAAGAACGCCATGGCAGATCTC
GAGGCTAAGAATGACGATGCCAGACGCGAAATGGCTGTAGCGGATGCTCTCGACGAGATACGGCTGAGAAACGCT
CGGATCAACCAGTCTGAAAAGGACGACGTTAATTTCGCCGACGCCATCGTTCGAGCTGAAGACGAAGAGCGCGCT
CGGCAGGAGCGGGAGGATGAGGAAGCGGCGAAGAGAGCGTTCGCCACAACAGAGGCTGAAACTGAGTGGCAAGTT
ATGGATGACGATGTCACGGATGGCGGTTCATCAAGCAGTTCTCAGCCAAGGAGTGGATCGAAAATTGCAACAACG
TCCGTCAACTCTCGTGCTAGATCGCCAGAGGTGTCGTTTAAGCGAATCGTCAAGAAGAAAAAGGATCACGCAGCG
TTGCTAGGGATCAAGAAGAAGCCATCCCTTGTATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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