Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04771
Gene name
Locationscaffold_05:1550402..1551286
Strand-
Gene length (bp)884
Transcript length (bp)813
Coding sequence length (bp)813
Protein length (aa) 271

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10277 Frag1 Frag1/DRAM/Sfk1 family 5.0E-38 1 214

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.5

Transmembrane Domains

Domain # Start End Length
1 2 24 22
2 53 70 17
3 91 113 22
4 123 142 19
5 163 185 22
6 195 217 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04771
MLPLFSSIVWLGMLLGMLIYWTVHEGSPHLPSMSVNAKIAFISDIGAFRLKPLFIVGSTVTSVTLNLAFIAERWL
RHNGRLLPNGSFTEKLLSALTIIFAGLGGGGLILLTIFDTWLHHVKHNAFLVIFIGGYLASAVSTCWEYQRLGIK
NRQHPLLRISFWLKLAFFSAELVLVILFGSLSAAHEQDAAAVFEWIVAFIFTFYILSFIIDLWPAVHTKDPANRF
EKPLSIHSSDSPSVSGPPRFPPTAPPSYAQSTESAVLQSDAPSYP*
Coding >Ophcf2|04771
ATGCTCCCGCTATTCTCCAGCATCGTCTGGTTGGGGATGCTCCTCGGCATGCTCATCTACTGGACAGTCCACGAG
GGAAGCCCTCACCTCCCATCCATGTCCGTCAACGCAAAGATCGCCTTCATCAGTGACATCGGCGCCTTTCGCCTC
AAGCCGCTCTTCATCGTTGGATCTACCGTCACGTCCGTCACCTTGAATCTTGCATTCATTGCCGAGCGCTGGCTG
CGTCACAACGGACGTCTACTGCCCAACGGCTCTTTCACCGAAAAACTCCTCTCTGCCCTGACCATCATCTTCGCC
GGTCTCGGCGGCGGCGGTCTTATCCTCCTCACCATCTTTGACACTTGGCTGCATCACGTCAAGCATAACGCTTTC
CTCGTCATCTTCATCGGCGGCTATCTGGCCTCGGCCGTCAGCACCTGTTGGGAATACCAGCGCCTCGGAATCAAG
AACCGCCAACACCCTCTTCTCCGAATCTCCTTCTGGCTCAAGCTCGCCTTCTTCTCCGCCGAGCTCGTTCTCGTC
ATCCTGTTTGGTTCCCTCTCCGCCGCTCACGAGCAAGATGCCGCCGCCGTCTTCGAGTGGATTGTCGCTTTCATC
TTTACCTTTTACATCCTGTCCTTCATCATCGATCTCTGGCCCGCCGTCCACACCAAGGACCCCGCCAATCGGTTT
GAGAAGCCGCTGTCGATACATTCCTCCGACTCGCCCAGCGTCTCCGGCCCCCCGAGATTCCCGCCTACCGCTCCC
CCAAGCTACGCGCAAAGCACTGAGTCGGCCGTGCTGCAGTCCGACGCCCCCAGCTATCCGTAA
Transcript >Ophcf2|04771
ATGCTCCCGCTATTCTCCAGCATCGTCTGGTTGGGGATGCTCCTCGGCATGCTCATCTACTGGACAGTCCACGAG
GGAAGCCCTCACCTCCCATCCATGTCCGTCAACGCAAAGATCGCCTTCATCAGTGACATCGGCGCCTTTCGCCTC
AAGCCGCTCTTCATCGTTGGATCTACCGTCACGTCCGTCACCTTGAATCTTGCATTCATTGCCGAGCGCTGGCTG
CGTCACAACGGACGTCTACTGCCCAACGGCTCTTTCACCGAAAAACTCCTCTCTGCCCTGACCATCATCTTCGCC
GGTCTCGGCGGCGGCGGTCTTATCCTCCTCACCATCTTTGACACTTGGCTGCATCACGTCAAGCATAACGCTTTC
CTCGTCATCTTCATCGGCGGCTATCTGGCCTCGGCCGTCAGCACCTGTTGGGAATACCAGCGCCTCGGAATCAAG
AACCGCCAACACCCTCTTCTCCGAATCTCCTTCTGGCTCAAGCTCGCCTTCTTCTCCGCCGAGCTCGTTCTCGTC
ATCCTGTTTGGTTCCCTCTCCGCCGCTCACGAGCAAGATGCCGCCGCCGTCTTCGAGTGGATTGTCGCTTTCATC
TTTACCTTTTACATCCTGTCCTTCATCATCGATCTCTGGCCCGCCGTCCACACCAAGGACCCCGCCAATCGGTTT
GAGAAGCCGCTGTCGATACATTCCTCCGACTCGCCCAGCGTCTCCGGCCCCCCGAGATTCCCGCCTACCGCTCCC
CCAAGCTACGCGCAAAGCACTGAGTCGGCCGTGCTGCAGTCCGACGCCCCCAGCTATCCGTAA
Gene >Ophcf2|04771
ATGCTCCCGCTATTCTCCAGCATCGTCTGGTTGGGGATGCTCCTCGGCATGCTCATCTACTGGACAGTCCACGAG
GGAAGCCCTCACCTCCCATCCATGTCCGTCAACGCAAAGATCGCCTTCATCAGTGACATCGGCGCCTTTCGCCTC
AAGCCGCTCTTCATCGTTGGATCTACCGTCACGTCCGTCACCTTGAATCTTGCATTCATTGCCGAGCGCTGGCTG
CGTCACAACGGACGTCTACTGCCCAACGGCTCTTTCACCGAAAAACTCCTCTCTGCCCTGACCATCATCTTCGCC
GGTCTCGGCGGCGGCGGTCTTATCCTCCTCACCATCTTTGACACTTGGCTGCATCACGTCAAGCATAACGCTTTC
CTCGTCATCTTCATCGGCGGCTATCTGGCCTCGGCCGTCAGCACCTGTTGGGAATACCAGCGCCTCGGAATCAGT
CAGTTCTCTTCTTCTCATTGTTGTTGTTAGTTCCCTTCGATCGATCTGTGCTGACGACACCCCCGTCAGAGAACC
GCCAACACCCTCTTCTCCGAATCTCCTTCTGGCTCAAGCTCGCCTTCTTCTCCGCCGAGCTCGTTCTCGTCATCC
TGTTTGGTTCCCTCTCCGCCGCTCACGAGCAAGATGCCGCCGCCGTCTTCGAGTGGATTGTCGCTTTCATCTTTA
CCTTTTACATCCTGTCCTTCATCATCGATCTCTGGCCCGCCGTCCACACCAAGGACCCCGCCAATCGGTTTGAGA
AGCCGCTGTCGATACATTCCTCCGACTCGCCCAGCGTCTCCGGCCCCCCGAGATTCCCGCCTACCGCTCCCCCAA
GCTACGCGCAAAGCACTGAGTCGGCCGTGCTGCAGTCCGACGCCCCCAGCTATCCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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