Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04759
Gene name
Locationscaffold_05:1519439..1520426
Strand+
Gene length (bp)987
Transcript length (bp)819
Coding sequence length (bp)819
Protein length (aa) 273

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20520 Ac45-VOA1_TM V0 complex accessory subunit Ac45/VOA1 transmembrane domain 1.1E-17 222 261

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 227 249 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04759
MRLRTVVEILAFSLSAAALSDSFPLLLLSTAKFHDVPNRNQFQTSDEALKYVRGVLATCPTNRYLIATQPGIHAS
DFRQANGCAMPRLCRAAAKPQIKSEFSVAEVFGDTEYAGFSQHIESECAKKGKAVIVDEVHLPPLSSRDRASDLL
KHDMILSDSFEAVTKNDDYTILFLPRPGEPAYQAEFIDPLHQDLKRDFEPELVRRDDNDTAWQRLPLFEKYQFFT
PGIFTGIIVALVLFSILGVGLSALSSLEVSYGAFEKDMGPAAQKKQQ*
Coding >Ophcf2|04759
ATGCGTCTTCGTACAGTTGTCGAAATTCTAGCGTTTTCGCTTTCGGCAGCGGCGCTGTCGGATTCATTTCCGCTT
CTGCTCCTTTCCACGGCAAAGTTTCACGATGTTCCCAACCGCAACCAGTTTCAGACGAGCGACGAGGCGTTGAAA
TACGTCAGAGGGGTGCTGGCGACGTGCCCTACGAACCGTTATCTTATTGCCACGCAGCCGGGAATCCATGCCTCC
GACTTTCGTCAGGCCAACGGGTGCGCCATGCCCCGTCTTTGCCGAGCGGCCGCGAAGCCGCAGATCAAGAGCGAA
TTTTCTGTCGCTGAAGTGTTTGGGGATACGGAATACGCTGGGTTCTCTCAGCATATTGAGTCGGAGTGCGCCAAG
AAGGGCAAGGCCGTCATCGTCGACGAGGTTCATTTGCCGCCCTTGAGCAGCAGAGACAGGGCCAGCGACTTGCTC
AAGCATGACATGATCCTTTCCGACAGCTTCGAGGCCGTCACCAAGAACGACGACTACACCATTCTTTTCCTACCG
AGACCGGGCGAGCCCGCGTATCAAGCCGAATTTATCGATCCGCTACACCAAGATCTGAAGAGAGATTTCGAGCCG
GAGCTGGTGCGTCGCGACGATAACGACACCGCATGGCAGCGCCTCCCGCTATTTGAAAAGTACCAATTCTTCACC
CCTGGCATTTTCACGGGGATTATTGTAGCCCTGGTACTCTTTTCGATTCTCGGTGTCGGACTCAGCGCGTTGTCG
AGCTTGGAGGTATCGTATGGCGCTTTTGAGAAGGACATGGGCCCTGCTGCTCAGAAGAAGCAGCAGTGA
Transcript >Ophcf2|04759
ATGCGTCTTCGTACAGTTGTCGAAATTCTAGCGTTTTCGCTTTCGGCAGCGGCGCTGTCGGATTCATTTCCGCTT
CTGCTCCTTTCCACGGCAAAGTTTCACGATGTTCCCAACCGCAACCAGTTTCAGACGAGCGACGAGGCGTTGAAA
TACGTCAGAGGGGTGCTGGCGACGTGCCCTACGAACCGTTATCTTATTGCCACGCAGCCGGGAATCCATGCCTCC
GACTTTCGTCAGGCCAACGGGTGCGCCATGCCCCGTCTTTGCCGAGCGGCCGCGAAGCCGCAGATCAAGAGCGAA
TTTTCTGTCGCTGAAGTGTTTGGGGATACGGAATACGCTGGGTTCTCTCAGCATATTGAGTCGGAGTGCGCCAAG
AAGGGCAAGGCCGTCATCGTCGACGAGGTTCATTTGCCGCCCTTGAGCAGCAGAGACAGGGCCAGCGACTTGCTC
AAGCATGACATGATCCTTTCCGACAGCTTCGAGGCCGTCACCAAGAACGACGACTACACCATTCTTTTCCTACCG
AGACCGGGCGAGCCCGCGTATCAAGCCGAATTTATCGATCCGCTACACCAAGATCTGAAGAGAGATTTCGAGCCG
GAGCTGGTGCGTCGCGACGATAACGACACCGCATGGCAGCGCCTCCCGCTATTTGAAAAGTACCAATTCTTCACC
CCTGGCATTTTCACGGGGATTATTGTAGCCCTGGTACTCTTTTCGATTCTCGGTGTCGGACTCAGCGCGTTGTCG
AGCTTGGAGGTATCGTATGGCGCTTTTGAGAAGGACATGGGCCCTGCTGCTCAGAAGAAGCAGCAGTGA
Gene >Ophcf2|04759
ATGCGTCTTCGTACAGTTGTCGAAATTCTAGCGTTTTCGCTTTCGGCAGCGGCGCTGTCGGATTCATTTCCGCTT
CTGCTCCTTTCCACGGCAAAGTAGGCATTCCGGGCCCGACGGCCAGCTCGCCTCCTGACTTCCTCGCAACTAACC
TTGACCAGGTTTCACGATGTTCCCAACCGCAACCAGTTTCAGACGAGCGACGAGGCGTTGAAATACGTCAGAGGG
GTGCTGGCGACGTGCCCTACGAACCGTTATCTTATTGCCACGCAGCCGGGAATCCATGCCTCCGACTTTCGTCAG
GCCAACGGGTGCGCCATGCCCCGTCTTTGCCGAGCGGCCGCGAAGCCGCAGATCAAGAGCGAATTTTCTGTCGCT
GAAGTGTTTGGGGATACGGAATACGCTGGGTTCTCTCAGCATATTGAGTCGGAGTGCGCCAAGAAGGGCAAGGCC
GTCATCGTCGACGAGGTTCATTTGCCGCCCTTGAGCAGCAGAGACAGGGCCAGCGACTTGCTCAAGCATGGTGAA
TTTACCCACACAATCCGTTGGGTATCCAGTGGGCTTACTCCGTGATAATAGACATGATCCTTTCCGACAGCTTCG
AGGCCGTCACCAAGAACGACGACTACACCATTCTTTTCCTACCGAGACCGGGCGAGCCCGCGTATCAAGCCGAAT
TTATCGATCCGCTACACCAAGATCTGAAGAGAGATTTCGAGCCGGAGCTGGTGCGTCGCGACGATAACGACACCG
CATGGCAGCGCCTCCCGCTATTTGAAAAGTACCAATTCTTCACCCCTGGTATTACCTCTTCCTCGCCCTCTTTAC
CCCTCGACCTAACCTCCTCCAGGCATTTTCACGGGGATTATTGTAGCCCTGGTACTCTTTTCGATTCTCGGTGTC
GGACTCAGCGCGTTGTCGAGCTTGGAGGTATCGTATGGCGCTTTTGAGAAGGACATGGGCCCTGCTGCTCAGAAG
AAGCAGCAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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