Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04753
Gene name
Locationscaffold_05:1505358..1506461
Strand-
Gene length (bp)1103
Transcript length (bp)819
Coding sequence length (bp)819
Protein length (aa) 273

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PFAM Domains

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.45

Transmembrane Domains

Domain # Start End Length
1 208 230 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04753
MAVKDQKALTLPHLSGVDPDGTPSSRDTCGWISGRPESALTCHPGQRCAVDSARSLVGCCWTPLDGACRLSTRCL
EGGPRSDARDGGDAARTLDLVCRGEAAPYCKTDVFASDSIIDGFSLLICGTDRRTETAFRFTVDSSTASSPSSRI
QTATSLSSLTASTPIPNPVGPSHLSTSLGSAFVTPAPSTAPYPPLPSSSASAASPWAVTGAILGSVGGLAAVAGA
AWLLWKLVIRPKISLRGKSEKERRATERPAQRAEASGEAATQTEYQS*
Coding >Ophcf2|04753
ATGGCTGTAAAAGATCAGAAGGCCTTGACGCTCCCGCACCTGTCCGGCGTCGACCCCGATGGCACTCCGTCTAGT
CGAGACACCTGCGGCTGGATCTCAGGGAGACCAGAAAGCGCACTTACCTGCCATCCTGGGCAGAGGTGCGCCGTC
GACTCGGCACGCAGTCTCGTCGGCTGCTGCTGGACGCCCTTGGACGGGGCCTGTCGTCTCTCGACCAGATGTCTG
GAGGGCGGGCCTCGGTCTGATGCGCGAGACGGCGGGGATGCCGCCCGAACGCTGGATTTGGTCTGTCGAGGAGAA
GCGGCCCCGTACTGCAAGACTGACGTGTTCGCCTCCGACTCGATCATCGACGGCTTCTCGCTTCTCATCTGTGGC
ACAGATAGGAGGACTGAGACGGCTTTCCGCTTCACCGTCGACTCCTCGACCGCGTCCTCGCCATCCAGTAGAATT
CAGACGGCGACTTCATTGTCCTCTTTGACCGCTTCGACACCGATCCCGAACCCAGTCGGCCCCTCACACTTATCG
ACATCTCTTGGTTCTGCTTTTGTCACGCCGGCCCCTTCGACAGCTCCATATCCTCCCCTCCCTTCTTCTTCTGCC
TCTGCTGCTTCGCCGTGGGCCGTCACGGGAGCCATATTGGGTAGCGTCGGGGGTCTGGCTGCCGTCGCCGGTGCC
GCTTGGCTGTTATGGAAGCTAGTCATCAGACCGAAGATTTCGTTGCGTGGGAAGTCCGAAAAAGAGCGCCGAGCT
ACAGAACGCCCTGCTCAACGAGCCGAAGCTTCTGGCGAGGCAGCCACTCAGACGGAATATCAGTCTTGA
Transcript >Ophcf2|04753
ATGGCTGTAAAAGATCAGAAGGCCTTGACGCTCCCGCACCTGTCCGGCGTCGACCCCGATGGCACTCCGTCTAGT
CGAGACACCTGCGGCTGGATCTCAGGGAGACCAGAAAGCGCACTTACCTGCCATCCTGGGCAGAGGTGCGCCGTC
GACTCGGCACGCAGTCTCGTCGGCTGCTGCTGGACGCCCTTGGACGGGGCCTGTCGTCTCTCGACCAGATGTCTG
GAGGGCGGGCCTCGGTCTGATGCGCGAGACGGCGGGGATGCCGCCCGAACGCTGGATTTGGTCTGTCGAGGAGAA
GCGGCCCCGTACTGCAAGACTGACGTGTTCGCCTCCGACTCGATCATCGACGGCTTCTCGCTTCTCATCTGTGGC
ACAGATAGGAGGACTGAGACGGCTTTCCGCTTCACCGTCGACTCCTCGACCGCGTCCTCGCCATCCAGTAGAATT
CAGACGGCGACTTCATTGTCCTCTTTGACCGCTTCGACACCGATCCCGAACCCAGTCGGCCCCTCACACTTATCG
ACATCTCTTGGTTCTGCTTTTGTCACGCCGGCCCCTTCGACAGCTCCATATCCTCCCCTCCCTTCTTCTTCTGCC
TCTGCTGCTTCGCCGTGGGCCGTCACGGGAGCCATATTGGGTAGCGTCGGGGGTCTGGCTGCCGTCGCCGGTGCC
GCTTGGCTGTTATGGAAGCTAGTCATCAGACCGAAGATTTCGTTGCGTGGGAAGTCCGAAAAAGAGCGCCGAGCT
ACAGAACGCCCTGCTCAACGAGCCGAAGCTTCTGGCGAGGCAGCCACTCAGACGGAATATCAGTCTTGA
Gene >Ophcf2|04753
ATGGCTGTAAAAGATCAGAAGGCCTTGACGCTCCCGCACCTGTCCGGCGTCGACCCCGATGGCACTCCGTCTAGT
CGAGACACCTGCGGCTGGATCTCAGGGAGACCAGGTAAAGACGCTACAGCTAGCCTCTCCAAGCAGGACGAACAG
AGAACCTCAAGTGGCTAATCCTTGACCAGAAAGCGCACTTACCTGCCATCCTGGGCAGAGGTGCGCCGTCGACTC
GGCACGCAGTCTCGTCGGCTGCTGCTGGACGCCCTTGGACGGGGCCTGTCGTCTCTCGACCAGATGTCTGGAGGG
CGGGCCTCGGTCTGATGCGCGAGACGGCGGGGATGCCGCCCGAACGCTGGATTTGGTCTGGTCAGTGCTTACCGC
AGATGAGGGAGGCATCCGTACGAAAGGGGTGAAGCAAGGTCAAGCTAGTAAAATTGACAGGTCAGAAAATCACCG
AAACAAGGCGAAAAAGCTAATCAAAAAATGAAAATAAAAAATCGGGAAGCAGTCGAGGAGAAGCGGCCCCGTACT
GCAAGACTGACGTGTTCGCCTCCGACTCGATCATCGACGGCTTCTCGCTTCTCATCTGTGGCACAGATAGGAGGA
CTGAGACGGCTTTCCGCTTCACCGTCGACTCCTCGACCGCGTCCTCGCCATCCAGTAGAATTCAGACGGCGACTT
CATTGTCCTCTTTGACCGCTTCGACACCGATCCCGAACCCAGTCGGCCCCTCACACTTATCGACATCTCTTGGTT
CTGCTTTTGTCACGCCGGCCCCTTCGACAGCTCCATATCCTCCCCTCCCTTCTTCTTCTGCCTCTGCTGCTTCGC
CGTGGGCCGTCACGGGAGCCATATTGGGTAGCGTCGGTGAGTCCCGGTGAATGGAAGGGTGGCGATTTTCATCTT
GCTCTTTTTTTTTTCACTGACCTAGTAGTCTAGGGGGTCTGGCTGCCGTCGCCGGTGCCGCTTGGCTGTTATGGA
AGCTAGTCATCAGACCGAAGATTTCGTTGCGTGGGAAGTCCGAAAAAGAGCGCCGAGCTACAGAACGCCCTGCTC
AACGAGCCGAAGCTTCTGGCGAGGCAGCCACTCAGACGGAATATCAGTCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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