Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04687
Gene name
Locationscaffold_05:211781..213380
Strand-
Gene length (bp)1599
Transcript length (bp)1599
Coding sequence length (bp)1599
Protein length (aa) 533

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10509 GalKase_gal_bdg Galactokinase galactose-binding signature 8.1E-20 33 80
PF00288 GHMP_kinases_N GHMP kinases N terminal domain 1.6E-14 155 221
PF08544 GHMP_kinases_C GHMP kinases C terminal 5.1E-12 422 492

GO

GO Term Description Terminal node
GO:0005524 ATP binding Yes
GO:0032559 adenyl ribonucleotide binding No
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:0036094 small molecule binding No
GO:1901265 nucleoside phosphate binding No
GO:0003674 molecular_function No
GO:0032553 ribonucleotide binding No
GO:0017076 purine nucleotide binding No
GO:0043167 ion binding No
GO:0000166 nucleotide binding No
GO:0030554 adenyl nucleotide binding No
GO:0043168 anion binding No
GO:1901363 heterocyclic compound binding No
GO:0097367 carbohydrate derivative binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0032555 purine ribonucleotide binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6857 0.4513 0.0557 0.1514 0.304 0.0082 0.0855 0.1891 0.1435 0.1869

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 145.49 78.55 212.43
Alive In ants, during behavior modification 70.48 39.79 101.17
Dead In ants, recently dead 92.28 52.09 132.48

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.000238 yes
Alive Dead 0.096232 no
Dead Fungus 0.013747 yes

Orthologs

Orthofinder run ID4
Orthogroup4225
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4323
Ophiocordyceps australis map64 (Brazil) OphauB2|8063
Ophiocordyceps camponoti-floridani Ophcf2|04687 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|6428
Ophiocordyceps kimflemingae Ophio5|5320
Ophiocordyceps subramaniannii Hirsu2|8621

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04687
MSGPVPVAGALADIYPVGALASEAPRWDQLLRRFHHVYGRPAAFVARSPGRVNIIGEHIDYSLYSVLPMAITADA
LVAVASRPVADGAAATIRLANVHPDRFPAREFRVLPGEGDVEIDASTFEWSNYFKSGLRGAVQLLLNDRRSGAQL
CDMEVLIDGNVPVGGGLSSSAALVSASALAVLVANQAVPVDKKQLTELAVVSERAVGVNSGGMDQAASVFSEQGA
ALFVSFSPALEARPVNFPPTRPELCFVIAQSFVTSNKHVTGPIHYNLRVVEVTLAAAYLNAVLNPPGTELPADAG
PLGTSLNGFHDSFFLHLSGSDYAAAKSLAKEEELEKLVAQTEKTLTQEQGYTKEEISKVLNLSVAELEKRYLSSF
PVRSERFKLRQRALHVFTEALRVLRFLTLLERPLGTGASDTTEYNRKLGGLMNETQVSCRELYECSCPELDAICE
IARRAGSYGSRLTGAGWGGCSVHLVPVDKVAAVKEALEREYYAGKQLTEEQREAAVVVSRPGRGSAVYHVDGDVI
VERNQGQ*
Coding >Ophcf2|04687
ATGTCCGGTCCCGTTCCCGTCGCCGGCGCCCTTGCCGACATCTACCCGGTGGGGGCGCTGGCGTCCGAGGCCCCG
CGGTGGGATCAGCTGCTGCGGCGCTTCCACCATGTCTATGGCCGGCCTGCCGCCTTCGTGGCCCGGTCGCCGGGG
AGGGTCAACATTATTGGCGAGCATATCGACTACTCGCTCTACTCGGTGCTGCCCATGGCCATCACGGCCGATGCG
CTCGTCGCCGTAGCCTCCCGGCCTGTCGCCGATGGTGCGGCTGCCACCATCCGGCTCGCCAATGTGCACCCTGAT
AGGTTTCCGGCCCGCGAGTTCCGCGTCCTCCCCGGTGAGGGCGACGTCGAGATCGATGCGTCGACGTTTGAATGG
TCCAATTACTTCAAGAGCGGGCTGCGAGGCGCTGTTCAGCTCCTGCTGAATGACCGCCGTTCGGGCGCTCAGCTC
TGCGACATGGAAGTCCTGATCGACGGGAACGTCCCTGTCGGCGGAGGGCTCAGCTCGAGCGCAGCCCTGGTCAGC
GCCAGCGCCCTTGCCGTCCTCGTCGCCAACCAGGCCGTACCCGTCGACAAGAAGCAGCTGACGGAGCTGGCCGTC
GTTAGCGAGCGCGCGGTCGGTGTCAACTCGGGCGGCATGGACCAAGCCGCATCCGTCTTCTCCGAGCAGGGCGCC
GCACTCTTCGTCTCCTTTAGTCCGGCGCTTGAGGCCCGGCCCGTCAACTTCCCACCGACCCGGCCCGAGCTCTGC
TTCGTCATCGCCCAGAGCTTCGTCACTTCCAACAAGCATGTCACAGGACCCATACACTACAACCTACGCGTCGTC
GAGGTTACCCTAGCGGCAGCCTATCTTAACGCCGTCCTCAACCCGCCCGGCACCGAACTGCCCGCCGACGCTGGG
CCGCTGGGGACCAGCTTGAACGGTTTTCACGACTCCTTCTTCCTACACCTCAGCGGCTCTGACTACGCAGCCGCC
AAGAGCCTGGCCAAGGAGGAGGAGCTGGAGAAGCTGGTGGCGCAGACGGAAAAGACGCTCACGCAGGAACAGGGC
TACACCAAAGAGGAGATTTCCAAGGTGCTCAATCTTTCGGTGGCTGAGCTCGAGAAGCGCTATCTGTCGAGCTTT
CCTGTCCGTTCCGAGAGATTCAAGCTCCGGCAGCGCGCGCTTCATGTTTTTACCGAAGCACTTCGCGTCCTTCGC
TTCCTTACACTGCTTGAACGGCCGCTCGGCACGGGGGCGTCGGACACGACCGAGTACAACCGCAAGCTGGGGGGT
TTGATGAACGAGACGCAGGTTTCATGCCGTGAGCTGTACGAATGTAGCTGCCCCGAGCTAGATGCCATCTGCGAG
ATTGCACGGCGGGCGGGTTCCTACGGCAGCAGACTGACGGGCGCCGGCTGGGGAGGTTGCAGCGTACACCTCGTC
CCCGTCGACAAAGTGGCTGCTGTCAAGGAGGCTCTGGAGCGCGAATATTACGCAGGTAAGCAGCTGACGGAGGAG
CAACGGGAGGCCGCCGTGGTGGTGAGCCGGCCGGGTCGCGGAAGTGCTGTCTATCACGTCGACGGGGATGTCATC
GTCGAGAGGAACCAGGGGCAGTAA
Transcript >Ophcf2|04687
ATGTCCGGTCCCGTTCCCGTCGCCGGCGCCCTTGCCGACATCTACCCGGTGGGGGCGCTGGCGTCCGAGGCCCCG
CGGTGGGATCAGCTGCTGCGGCGCTTCCACCATGTCTATGGCCGGCCTGCCGCCTTCGTGGCCCGGTCGCCGGGG
AGGGTCAACATTATTGGCGAGCATATCGACTACTCGCTCTACTCGGTGCTGCCCATGGCCATCACGGCCGATGCG
CTCGTCGCCGTAGCCTCCCGGCCTGTCGCCGATGGTGCGGCTGCCACCATCCGGCTCGCCAATGTGCACCCTGAT
AGGTTTCCGGCCCGCGAGTTCCGCGTCCTCCCCGGTGAGGGCGACGTCGAGATCGATGCGTCGACGTTTGAATGG
TCCAATTACTTCAAGAGCGGGCTGCGAGGCGCTGTTCAGCTCCTGCTGAATGACCGCCGTTCGGGCGCTCAGCTC
TGCGACATGGAAGTCCTGATCGACGGGAACGTCCCTGTCGGCGGAGGGCTCAGCTCGAGCGCAGCCCTGGTCAGC
GCCAGCGCCCTTGCCGTCCTCGTCGCCAACCAGGCCGTACCCGTCGACAAGAAGCAGCTGACGGAGCTGGCCGTC
GTTAGCGAGCGCGCGGTCGGTGTCAACTCGGGCGGCATGGACCAAGCCGCATCCGTCTTCTCCGAGCAGGGCGCC
GCACTCTTCGTCTCCTTTAGTCCGGCGCTTGAGGCCCGGCCCGTCAACTTCCCACCGACCCGGCCCGAGCTCTGC
TTCGTCATCGCCCAGAGCTTCGTCACTTCCAACAAGCATGTCACAGGACCCATACACTACAACCTACGCGTCGTC
GAGGTTACCCTAGCGGCAGCCTATCTTAACGCCGTCCTCAACCCGCCCGGCACCGAACTGCCCGCCGACGCTGGG
CCGCTGGGGACCAGCTTGAACGGTTTTCACGACTCCTTCTTCCTACACCTCAGCGGCTCTGACTACGCAGCCGCC
AAGAGCCTGGCCAAGGAGGAGGAGCTGGAGAAGCTGGTGGCGCAGACGGAAAAGACGCTCACGCAGGAACAGGGC
TACACCAAAGAGGAGATTTCCAAGGTGCTCAATCTTTCGGTGGCTGAGCTCGAGAAGCGCTATCTGTCGAGCTTT
CCTGTCCGTTCCGAGAGATTCAAGCTCCGGCAGCGCGCGCTTCATGTTTTTACCGAAGCACTTCGCGTCCTTCGC
TTCCTTACACTGCTTGAACGGCCGCTCGGCACGGGGGCGTCGGACACGACCGAGTACAACCGCAAGCTGGGGGGT
TTGATGAACGAGACGCAGGTTTCATGCCGTGAGCTGTACGAATGTAGCTGCCCCGAGCTAGATGCCATCTGCGAG
ATTGCACGGCGGGCGGGTTCCTACGGCAGCAGACTGACGGGCGCCGGCTGGGGAGGTTGCAGCGTACACCTCGTC
CCCGTCGACAAAGTGGCTGCTGTCAAGGAGGCTCTGGAGCGCGAATATTACGCAGGTAAGCAGCTGACGGAGGAG
CAACGGGAGGCCGCCGTGGTGGTGAGCCGGCCGGGTCGCGGAAGTGCTGTCTATCACGTCGACGGGGATGTCATC
GTCGAGAGGAACCAGGGGCAGTAA
Gene >Ophcf2|04687
ATGTCCGGTCCCGTTCCCGTCGCCGGCGCCCTTGCCGACATCTACCCGGTGGGGGCGCTGGCGTCCGAGGCCCCG
CGGTGGGATCAGCTGCTGCGGCGCTTCCACCATGTCTATGGCCGGCCTGCCGCCTTCGTGGCCCGGTCGCCGGGG
AGGGTCAACATTATTGGCGAGCATATCGACTACTCGCTCTACTCGGTGCTGCCCATGGCCATCACGGCCGATGCG
CTCGTCGCCGTAGCCTCCCGGCCTGTCGCCGATGGTGCGGCTGCCACCATCCGGCTCGCCAATGTGCACCCTGAT
AGGTTTCCGGCCCGCGAGTTCCGCGTCCTCCCCGGTGAGGGCGACGTCGAGATCGATGCGTCGACGTTTGAATGG
TCCAATTACTTCAAGAGCGGGCTGCGAGGCGCTGTTCAGCTCCTGCTGAATGACCGCCGTTCGGGCGCTCAGCTC
TGCGACATGGAAGTCCTGATCGACGGGAACGTCCCTGTCGGCGGAGGGCTCAGCTCGAGCGCAGCCCTGGTCAGC
GCCAGCGCCCTTGCCGTCCTCGTCGCCAACCAGGCCGTACCCGTCGACAAGAAGCAGCTGACGGAGCTGGCCGTC
GTTAGCGAGCGCGCGGTCGGTGTCAACTCGGGCGGCATGGACCAAGCCGCATCCGTCTTCTCCGAGCAGGGCGCC
GCACTCTTCGTCTCCTTTAGTCCGGCGCTTGAGGCCCGGCCCGTCAACTTCCCACCGACCCGGCCCGAGCTCTGC
TTCGTCATCGCCCAGAGCTTCGTCACTTCCAACAAGCATGTCACAGGACCCATACACTACAACCTACGCGTCGTC
GAGGTTACCCTAGCGGCAGCCTATCTTAACGCCGTCCTCAACCCGCCCGGCACCGAACTGCCCGCCGACGCTGGG
CCGCTGGGGACCAGCTTGAACGGTTTTCACGACTCCTTCTTCCTACACCTCAGCGGCTCTGACTACGCAGCCGCC
AAGAGCCTGGCCAAGGAGGAGGAGCTGGAGAAGCTGGTGGCGCAGACGGAAAAGACGCTCACGCAGGAACAGGGC
TACACCAAAGAGGAGATTTCCAAGGTGCTCAATCTTTCGGTGGCTGAGCTCGAGAAGCGCTATCTGTCGAGCTTT
CCTGTCCGTTCCGAGAGATTCAAGCTCCGGCAGCGCGCGCTTCATGTTTTTACCGAAGCACTTCGCGTCCTTCGC
TTCCTTACACTGCTTGAACGGCCGCTCGGCACGGGGGCGTCGGACACGACCGAGTACAACCGCAAGCTGGGGGGT
TTGATGAACGAGACGCAGGTTTCATGCCGTGAGCTGTACGAATGTAGCTGCCCCGAGCTAGATGCCATCTGCGAG
ATTGCACGGCGGGCGGGTTCCTACGGCAGCAGACTGACGGGCGCCGGCTGGGGAGGTTGCAGCGTACACCTCGTC
CCCGTCGACAAAGTGGCTGCTGTCAAGGAGGCTCTGGAGCGCGAATATTACGCAGGTAAGCAGCTGACGGAGGAG
CAACGGGAGGCCGCCGTGGTGGTGAGCCGGCCGGGTCGCGGAAGTGCTGTCTATCACGTCGACGGGGATGTCATC
GTCGAGAGGAACCAGGGGCAGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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