Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04667
Gene name
Locationscaffold_05:160632..161966
Strand+
Gene length (bp)1334
Transcript length (bp)1176
Coding sequence length (bp)1176
Protein length (aa) 392

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00004 AAA ATPase family associated with various cellular activities (AAA) 1.3E-42 172 305
PF16450 Prot_ATP_ID_OB Proteasomal ATPase OB C-terminal domain 3.5E-11 59 114
PF17862 AAA_lid_3 AAA+ lid domain 4.6E-10 327 370
PF07728 AAA_5 AAA domain (dynein-related subfamily) 4.2E-05 171 292

GO

GO Term Description Terminal node
GO:0005524 ATP binding Yes
GO:0016887 ATP hydrolysis activity Yes
GO:0097159 organic cyclic compound binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0043168 anion binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0032559 adenyl ribonucleotide binding No
GO:0017111 nucleoside-triphosphatase activity No
GO:1901265 nucleoside phosphate binding No
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides No
GO:0003824 catalytic activity No
GO:0016817 hydrolase activity, acting on acid anhydrides No
GO:0016787 hydrolase activity No
GO:0003674 molecular_function No
GO:0032553 ribonucleotide binding No
GO:0017076 purine nucleotide binding No
GO:0032555 purine ribonucleotide binding No
GO:0000166 nucleotide binding No
GO:0016462 pyrophosphatase activity No
GO:0036094 small molecule binding No
GO:0043167 ion binding No
GO:0030554 adenyl nucleotide binding No
GO:0097367 carbohydrate derivative binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04667
MTPDEERRAALDSYRAKLIESREWEAKLKNLRLEIKQLQKEFDRTEDNIKALQSVGQIIGEVLKQLDDERFIVKA
SSGPRYVVGCRSKVDKVKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVSFAGIGGLNDQIRELREV
IELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK
EHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRK
IEIPLPNEVGRLEILKIHAADVAIDGDLDFESVVKMSDGLNGADLRNVVTEAGLFAIKDYRDSINQDDFNKAVRK
VAEAKKLEGKLEYRKL*
Coding >Ophcf2|04667
ATGACGCCCGATGAAGAGCGCCGAGCCGCCCTGGACTCGTACCGGGCCAAGCTCATCGAATCCCGCGAGTGGGAA
GCCAAACTGAAGAACCTGCGGCTGGAAATCAAGCAGCTTCAAAAAGAGTTCGACAGGACCGAGGATAACATCAAG
GCCCTGCAGAGCGTCGGCCAGATTATTGGCGAAGTGCTGAAACAGCTCGACGACGAGCGCTTCATTGTAAAAGCC
TCGTCGGGTCCTAGATATGTCGTCGGCTGCAGATCAAAGGTCGACAAGGTCAAGCTTAAGCAAGGCACTCGCGTT
GCCTTGGACATGACGACTCTGACCATTATGCGCATGTTGCCACGCGAAGTCGATCCGCTCGTCTACAACATGTCA
CTCGAAGACCCGGGTCAGGTCAGTTTTGCTGGCATCGGCGGCCTCAACGATCAAATTCGCGAGCTCAGGGAAGTC
ATCGAGCTCCCCCTCAAAAACCCGGAGCTGTTCCTCCGAGTGGGTATTAAGCCTCCCAAGGGCGTCCTGCTTTAC
GGACCGCCGGGGACGGGCAAGACGCTCCTCGCGCGGGCGGTTGCTAGCAGTTTGGAAACAAACTTCTTGAAAGTC
GTTTCCTCGGCCATCGTGGACAAGTATATTGGCGAGTCTGCGAGGCTGATCCGGGAGATGTTCGGATACGCGAAG
GAGCACGAGCCGTGCATCATCTTCATGGACGAGATTGACGCCATCGGTGGCCGCAGGTTCTCGGAGGGTACTAGT
GCGGACCGAGAGATTCAACGGACCCTGATGGAGCTTCTCAACCAGCTTGACGGCTTCGACTACCTGGGCAAGACC
AAGATCATCATGGCGACAAACCGGCCGGACACGCTGGACCCGGCGCTGCTGCGTGCTGGTCGCCTAGACCGCAAA
ATCGAAATCCCGCTACCCAACGAGGTCGGGCGGCTGGAGATTCTCAAGATCCACGCGGCTGACGTTGCCATCGAT
GGAGACTTGGACTTTGAAAGCGTCGTCAAGATGAGCGACGGGCTGAACGGGGCCGACCTGAGAAACGTCGTGACC
GAAGCGGGTCTATTCGCGATTAAAGACTACAGGGATTCCATCAACCAAGACGACTTCAATAAGGCTGTGCGCAAG
GTGGCCGAGGCGAAGAAGCTCGAGGGCAAATTGGAGTACAGGAAGCTATGA
Transcript >Ophcf2|04667
ATGACGCCCGATGAAGAGCGCCGAGCCGCCCTGGACTCGTACCGGGCCAAGCTCATCGAATCCCGCGAGTGGGAA
GCCAAACTGAAGAACCTGCGGCTGGAAATCAAGCAGCTTCAAAAAGAGTTCGACAGGACCGAGGATAACATCAAG
GCCCTGCAGAGCGTCGGCCAGATTATTGGCGAAGTGCTGAAACAGCTCGACGACGAGCGCTTCATTGTAAAAGCC
TCGTCGGGTCCTAGATATGTCGTCGGCTGCAGATCAAAGGTCGACAAGGTCAAGCTTAAGCAAGGCACTCGCGTT
GCCTTGGACATGACGACTCTGACCATTATGCGCATGTTGCCACGCGAAGTCGATCCGCTCGTCTACAACATGTCA
CTCGAAGACCCGGGTCAGGTCAGTTTTGCTGGCATCGGCGGCCTCAACGATCAAATTCGCGAGCTCAGGGAAGTC
ATCGAGCTCCCCCTCAAAAACCCGGAGCTGTTCCTCCGAGTGGGTATTAAGCCTCCCAAGGGCGTCCTGCTTTAC
GGACCGCCGGGGACGGGCAAGACGCTCCTCGCGCGGGCGGTTGCTAGCAGTTTGGAAACAAACTTCTTGAAAGTC
GTTTCCTCGGCCATCGTGGACAAGTATATTGGCGAGTCTGCGAGGCTGATCCGGGAGATGTTCGGATACGCGAAG
GAGCACGAGCCGTGCATCATCTTCATGGACGAGATTGACGCCATCGGTGGCCGCAGGTTCTCGGAGGGTACTAGT
GCGGACCGAGAGATTCAACGGACCCTGATGGAGCTTCTCAACCAGCTTGACGGCTTCGACTACCTGGGCAAGACC
AAGATCATCATGGCGACAAACCGGCCGGACACGCTGGACCCGGCGCTGCTGCGTGCTGGTCGCCTAGACCGCAAA
ATCGAAATCCCGCTACCCAACGAGGTCGGGCGGCTGGAGATTCTCAAGATCCACGCGGCTGACGTTGCCATCGAT
GGAGACTTGGACTTTGAAAGCGTCGTCAAGATGAGCGACGGGCTGAACGGGGCCGACCTGAGAAACGTCGTGACC
GAAGCGGGTCTATTCGCGATTAAAGACTACAGGGATTCCATCAACCAAGACGACTTCAATAAGGCTGTGCGCAAG
GTGGCCGAGGCGAAGAAGCTCGAGGGCAAATTGGAGTACAGGAAGCTATGA
Gene >Ophcf2|04667
ATGACGCCCGATGAAGAGCGCCGAGCCGCCCTGGACTCGTACCGGGCCAAGCTCATCGAATCCCGCGAGTGGGAA
GCCAAACTGAAGAACCTGCGGCTGGAAATCAAGCAGCTTCAAAAAGAGTTCGACAGGACCGAGGATAACATCAAG
GCCCTGCAGAGCGTCGGCCAGATTATTGGCGAAGTGCTGAAACAGCTCGACGACGAGCGCTGTATGGAGCCCCCT
TCCGGAAAGCTTACCATTGGCTAACCTGCTGTCGCAGTCATTGTAAAAGCCTCGTCGGGTCCTAGATATGTCGTC
GGCTGCAGATCAAAGGTCGACAAGGTCAAGCTTAAGCAAGGCACTCGCGTTGCCTTGGACATGACGACTCTGACC
ATTATGCGCATGTTGCCACGCGAAGTCGATCCGCTCGTCTACAACATGTCACTCGAAGACCCGGGTCAGGTCAGT
TTTGCTGGCATCGGCGGCCTCAACGATCAAATTCGCGAGCTCAGGGAAGTCATCGAGCTCCCCCTCAAAAACCCG
GAGCTGTTCCTCCGAGTGGGTATTAAGCCTCCCAAGGGCGTCCTGCTTTACGGACCGCCGGGGACGGGCAAGACG
CTCCTCGCGCGGGCGGTTGCTAGCAGTTTGGAAACAAACTTCTTGAAAGGTGAGTGGATGGCAGCAAGGGCGCGC
AAGCTTCGTCGGCTCACGGATCGACAGTCGTTTCCTCGGCCATCGTGGACAAGTATATTGGCGAGTCTGCGAGGC
TGATCCGGGAGATGTTCGGATACGCGAAGGAGCACGAGCCGTGCATCATCTTCATGGACGAGATTGACGCCATCG
GTGGCCGCAGGTTCTCGGAGGGTACTAGTGCGGACCGAGAGATTCAACGGACCCTGATGGAGCTTCTCAACCAGC
TTGACGGCTTCGACTACCTGGGCAAGACCAAGATCATCATGGCGACAAACCGGCCGGACACGCTGGACCCGGCGC
TGCTGCGTGCTGGTCGCCTAGACCGCAAAATCGAAATCCCGCTACCCAACGAGGTCGGGCGGCTGGAGATTCTCA
AGATCCACGCGGCTGACGTTGCCATCGATGGAGACTTGGACTTTGAAAGCGTCGTCAAGATGAGCGACGGGCTGA
ACGGGGCCGACCTGAGAAACGTCGTGACCGAAGCGTAAGCTCTCCGTCAGAAAGTTGTTGACGGCCCCATAGCTG
ACGTCTGATGTAGGGGTCTATTCGCGATTAAAGACTACAGGGATTCCATCAACCAAGACGACTTCAATAAGGCTG
TGCGCAAGGTGGCCGAGGCGAAGAAGCTCGAGGGCAAATTGGAGTACAGGAAGCTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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