Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04642
Gene name
Locationscaffold_05:86208..87098
Strand+
Gene length (bp)890
Transcript length (bp)786
Coding sequence length (bp)786
Protein length (aa) 262

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00462 Glutaredoxin Glutaredoxin 8.0E-12 150 212

GO

GO Term Description Terminal node
GO:0097573 glutathione oxidoreductase activity Yes
GO:0016491 oxidoreductase activity No
GO:0003824 catalytic activity No
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors No
GO:0003674 molecular_function No
GO:0015035 protein-disulfide reductase activity No
GO:0140096 catalytic activity, acting on a protein No
GO:0015036 disulfide oxidoreductase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.5

Transmembrane Domains

Domain # Start End Length
1 7 26 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04642
MPSPRRLRLLMIATVVGVVLILFYASSFDDSASQRDSRTIKDFYRKTMDGMKKGSPPGQTVLEKEAKADKAADDQ
RLASSTKERLKAAEEKAKAKANTKALRPDPPSQLVGVGNSADGQAKKPPRPADVEPKKEFDARKELDAIVKGRPV
VIFSKTTCPFSQHAKGILLEKYHIEPKPYVVELDTHEHGKALQDELYRRTQHRTVPNIIINDGSGDVISLGGSDD
MVELDKAGSLARKIGDASKGLAHVKLRRLAVNPRRL*
Coding >Ophcf2|04642
ATGCCCTCGCCACGTCGCCTGCGGCTGCTGATGATAGCCACCGTCGTCGGCGTAGTCCTCATCCTCTTCTACGCC
TCATCCTTCGACGACTCAGCCAGCCAACGAGATTCACGCACGATTAAAGATTTCTACCGCAAGACGATGGACGGC
ATGAAAAAGGGCTCACCGCCCGGTCAAACGGTACTCGAAAAAGAAGCCAAGGCAGACAAGGCAGCCGACGACCAG
CGCCTCGCATCCAGCACAAAAGAGCGCCTCAAGGCCGCCGAGGAAAAGGCAAAGGCAAAGGCAAACACCAAGGCC
CTACGCCCAGATCCCCCGAGTCAGCTCGTCGGCGTCGGAAACTCGGCCGACGGTCAGGCGAAGAAACCGCCGCGG
CCCGCGGATGTCGAACCCAAGAAGGAGTTTGACGCCCGTAAGGAGCTCGATGCCATCGTCAAGGGACGGCCTGTC
GTCATCTTCTCCAAGACAACCTGCCCCTTTTCCCAGCACGCCAAGGGCATCCTCCTCGAAAAATACCACATCGAA
CCCAAGCCGTACGTGGTAGAGCTCGACACGCACGAGCACGGCAAGGCGCTACAAGACGAGCTCTACCGGCGGACG
CAGCACAGAACGGTGCCCAACATCATCATCAACGACGGCAGCGGTGACGTCATCAGCCTAGGAGGCAGCGACGAC
ATGGTCGAGCTCGACAAGGCGGGCAGCCTGGCGCGCAAGATCGGAGACGCCAGCAAGGGCCTCGCTCACGTCAAG
CTGCGGCGACTGGCTGTGAACCCGCGCCGTCTGTGA
Transcript >Ophcf2|04642
ATGCCCTCGCCACGTCGCCTGCGGCTGCTGATGATAGCCACCGTCGTCGGCGTAGTCCTCATCCTCTTCTACGCC
TCATCCTTCGACGACTCAGCCAGCCAACGAGATTCACGCACGATTAAAGATTTCTACCGCAAGACGATGGACGGC
ATGAAAAAGGGCTCACCGCCCGGTCAAACGGTACTCGAAAAAGAAGCCAAGGCAGACAAGGCAGCCGACGACCAG
CGCCTCGCATCCAGCACAAAAGAGCGCCTCAAGGCCGCCGAGGAAAAGGCAAAGGCAAAGGCAAACACCAAGGCC
CTACGCCCAGATCCCCCGAGTCAGCTCGTCGGCGTCGGAAACTCGGCCGACGGTCAGGCGAAGAAACCGCCGCGG
CCCGCGGATGTCGAACCCAAGAAGGAGTTTGACGCCCGTAAGGAGCTCGATGCCATCGTCAAGGGACGGCCTGTC
GTCATCTTCTCCAAGACAACCTGCCCCTTTTCCCAGCACGCCAAGGGCATCCTCCTCGAAAAATACCACATCGAA
CCCAAGCCGTACGTGGTAGAGCTCGACACGCACGAGCACGGCAAGGCGCTACAAGACGAGCTCTACCGGCGGACG
CAGCACAGAACGGTGCCCAACATCATCATCAACGACGGCAGCGGTGACGTCATCAGCCTAGGAGGCAGCGACGAC
ATGGTCGAGCTCGACAAGGCGGGCAGCCTGGCGCGCAAGATCGGAGACGCCAGCAAGGGCCTCGCTCACGTCAAG
CTGCGGCGACTGGCTGTGAACCCGCGCCGTCTGTGA
Gene >Ophcf2|04642
ATGCCCTCGCCACGTCGCCTGCGGCTGCTGATGATAGCCACCGTCGTCGGCGTAGTCCTCATCCTCTTCTACGCC
TCATCCTTCGACGACTCAGCCAGCCAACGAGATTCACGCACGATTAAAGATTTCTACCGCAAGACGATGGACGGC
ATGAAAAAGGGCTCACCGCCCGGTCAAACGGTACTCGAAAAAGAAGCCAAGGCAGACAAGGCAGCCGACGACCAG
CGCCTCGCATCCAGCACAAAAGAGCGCCTCAAGGCCGCCGAGGAAAAGGCAAAGGCAAAGGCAAACACCAAGGCC
CTACGCCCAGATCCCCCGAGTCAGCTCGTCGGCGTCGGAAACTCGGCCGACGGTCAGGCGAAGAAACCGCCGCGG
CCCGCGGATGTCGAACCCAAGAAGGAGTTTGACGCCCGTAAGGAGCTCGATGCCATCGTCAAGGGACGGCCTGGT
TAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGACTTCTTCCCATGTATCAGTTTGCGACGAGCTGACACTCT
TTTTTACTCTCCTTCTCCCAAACGCAGTCGTCATCTTCTCCAAGACAACCTGCCCCTTTTCCCAGCACGCCAAGG
GCATCCTCCTCGAAAAATACCACATCGAACCCAAGCCGTACGTGGTAGAGCTCGACACGCACGAGCACGGCAAGG
CGCTACAAGACGAGCTCTACCGGCGGACGCAGCACAGAACGGTGCCCAACATCATCATCAACGACGGCAGCGGTG
ACGTCATCAGCCTAGGAGGCAGCGACGACATGGTCGAGCTCGACAAGGCGGGCAGCCTGGCGCGCAAGATCGGAG
ACGCCAGCAAGGGCCTCGCTCACGTCAAGCTGCGGCGACTGGCTGTGAACCCGCGCCGTCTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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