Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04613
Gene name
Locationscaffold_04:3702787..3703863
Strand-
Gene length (bp)1076
Transcript length (bp)960
Coding sequence length (bp)960
Protein length (aa) 320

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03006 HlyIII Haemolysin-III related 9.4E-66 75 298

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 54 0.45

Transmembrane Domains

Domain # Start End Length
1 83 105 22
2 118 140 22
3 155 174 19
4 181 200 19
5 215 237 22
6 250 268 18
7 283 305 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04613
MSSPASENIPRQRRRRSSPRSTAHDALSSVKHTAQRSLLLLWDELPAWRRDNAYIVSGYRQSNPSLTHVLCSLTT
LHNESVNIWSHLFGALLALATGLYLYCVVHPRYRYATPRDVFVFGCFFAGAAVCLGMSATYHTILHHSEPVARWG
NKLDYTGIVFLIVGSFVPALYYGFYCHPTLLTSYLSAICLLGVACTAVSWLERFRTPQWRPYRTAIFVALGLSSV
FPVVHGIALYGYRELQESMSIDWTIAQGVLYIAGALLYAVRWPERSLPGTFDIWGSSHQIFHMFVLMAAVTHFCG
LAKAFDNHHAMAGYRCQAL*
Coding >Ophcf2|04613
ATGTCTTCACCCGCCTCCGAAAACATCCCTCGCCAACGCCGCCGCCGCTCCTCTCCCCGTTCTACCGCCCACGAT
GCCCTCAGCAGCGTCAAGCACACCGCGCAACGCTCCCTCCTCCTCCTCTGGGACGAGCTTCCCGCCTGGCGCCGC
GACAATGCCTACATCGTCTCGGGGTACCGTCAGAGCAATCCATCGCTGACGCACGTCCTCTGTTCCCTGACGACG
CTACACAACGAGTCGGTCAACATCTGGTCGCACCTCTTTGGCGCCCTGCTGGCCCTCGCTACCGGCCTCTACCTC
TACTGCGTTGTCCATCCCCGTTACCGCTACGCTACGCCCCGTGACGTCTTCGTCTTTGGCTGCTTCTTCGCCGGC
GCCGCCGTATGCCTCGGCATGAGCGCTACCTATCACACCATCCTTCACCACAGTGAGCCCGTCGCCCGTTGGGGC
AACAAACTCGATTACACCGGAATCGTCTTCCTCATCGTCGGAAGCTTCGTTCCGGCCTTGTACTATGGCTTCTAC
TGCCACCCGACCCTGCTGACGAGCTACCTGTCGGCGATATGCCTCCTCGGCGTCGCCTGTACCGCCGTCTCCTGG
CTCGAGCGCTTCCGCACCCCCCAATGGCGTCCCTATCGGACCGCCATATTCGTCGCCCTCGGCCTCTCAAGCGTC
TTTCCCGTGGTGCACGGGATTGCCTTATACGGCTACCGCGAGCTGCAAGAGAGCATGAGTATCGATTGGACCATC
GCACAAGGTGTGCTCTACATCGCCGGCGCCCTTCTCTATGCTGTCCGATGGCCGGAAAGGAGCCTCCCTGGAACC
TTTGACATCTGGGGGAGCTCTCACCAGATTTTCCACATGTTTGTCCTCATGGCCGCCGTAACCCACTTCTGCGGC
CTGGCCAAGGCCTTTGATAATCATCACGCCATGGCAGGATATCGGTGTCAGGCTCTGTGA
Transcript >Ophcf2|04613
ATGTCTTCACCCGCCTCCGAAAACATCCCTCGCCAACGCCGCCGCCGCTCCTCTCCCCGTTCTACCGCCCACGAT
GCCCTCAGCAGCGTCAAGCACACCGCGCAACGCTCCCTCCTCCTCCTCTGGGACGAGCTTCCCGCCTGGCGCCGC
GACAATGCCTACATCGTCTCGGGGTACCGTCAGAGCAATCCATCGCTGACGCACGTCCTCTGTTCCCTGACGACG
CTACACAACGAGTCGGTCAACATCTGGTCGCACCTCTTTGGCGCCCTGCTGGCCCTCGCTACCGGCCTCTACCTC
TACTGCGTTGTCCATCCCCGTTACCGCTACGCTACGCCCCGTGACGTCTTCGTCTTTGGCTGCTTCTTCGCCGGC
GCCGCCGTATGCCTCGGCATGAGCGCTACCTATCACACCATCCTTCACCACAGTGAGCCCGTCGCCCGTTGGGGC
AACAAACTCGATTACACCGGAATCGTCTTCCTCATCGTCGGAAGCTTCGTTCCGGCCTTGTACTATGGCTTCTAC
TGCCACCCGACCCTGCTGACGAGCTACCTGTCGGCGATATGCCTCCTCGGCGTCGCCTGTACCGCCGTCTCCTGG
CTCGAGCGCTTCCGCACCCCCCAATGGCGTCCCTATCGGACCGCCATATTCGTCGCCCTCGGCCTCTCAAGCGTC
TTTCCCGTGGTGCACGGGATTGCCTTATACGGCTACCGCGAGCTGCAAGAGAGCATGAGTATCGATTGGACCATC
GCACAAGGTGTGCTCTACATCGCCGGCGCCCTTCTCTATGCTGTCCGATGGCCGGAAAGGAGCCTCCCTGGAACC
TTTGACATCTGGGGGAGCTCTCACCAGATTTTCCACATGTTTGTCCTCATGGCCGCCGTAACCCACTTCTGCGGC
CTGGCCAAGGCCTTTGATAATCATCACGCCATGGCAGGATATCGGTGTCAGGCTCTGTGA
Gene >Ophcf2|04613
ATGTCTTCACCCGCCTCCGAAAACATCCCTCGCCAACGCCGCCGCCGCTCCTCTCCCCGTTCTACCGCCCACGAT
GCCCTCAGCAGCGTCAAGCACACCGCGCAACGCTCCCTCCTCCTCCTCTGGGACGAGCTTCCCGCCTGGCGCCGC
GACAATGCCTACATCGTCTCGGGGTACCGTCAGAGCAATCCATCGCTGACGCACGTCCTCTGTTCCCTGACGACG
CTACACAACGAGTCGGTCAACATCTGGTCGCACCTCTTTGGCGCCCTGCTGGCCCTCGCTACCGGCCTCTACCTC
TACTGCGTTGTCCATCCCCGTTACCGCTACGCTACGCCCCGTGACGTCTTCGTCTTTGGCTGCTTCTTCGCCGGC
GCCGCCGTATGCCTCGGCATGAGCGCTACCTATCACACCATCCTTCACCACAGTGAGCCCGTCGCCCGTTGGGGC
AACAAACTCGATTACACCGGAATCGTCTTCCTCATCGTCGGAAGCTTCGTTCCGGCCTTGTACTATGGCTTCTAC
TGCCACCCGACCCTGCTGACGAGCTACCTGTCGGCGGTACGTCTCCTTTCCTGTCGAGTCCATCCTCTTCTAACT
CGGAACCTGCCGCCCCCGCCAGATATGCCTCCTCGGCGTCGCCTGTACCGCCGTCTCCTGGCTCGAGCGCTTCCG
CACCCCCCAATGGCGTCCCTATCGGACCGCCATATTCGTCGCCCTCGGCCTCTCAAGCGTCTTTCCCGTGGTGCA
CGGGATTGCCTTATACGGCTACCGCGAGCTGCAAGAGAGCATGAGTATCGATTGGACCATCGCACAAGGTGTGCT
CTACATCGCCGGCGCCCTTCTCTATGCTGTAAGGGACTGCAAATTCTCCCTTGTCGGTCTGTTAGCTGAACCCAG
AACAAAAGGTCCGATGGCCGGAAAGGAGCCTCCCTGGAACCTTTGACATCTGGGGGAGCTCTCACCAGATTTTCC
ACATGTTTGTCCTCATGGCCGCCGTAACCCACTTCTGCGGCCTGGCCAAGGCCTTTGATAATCATCACGCCATGG
CAGGATATCGGTGTCAGGCTCTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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