Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04570
Gene name
Locationscaffold_04:3608106..3608934
Strand+
Gene length (bp)828
Transcript length (bp)828
Coding sequence length (bp)828
Protein length (aa) 276

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Nuclear localization signal 0.6143 0.4941 0.079 0.1693 0.1924 0.0808 0.1467 0.2094 0.1832 0.0247

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup318
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4668
Ophiocordyceps australis map64 (Brazil) OphauB2|4508
Ophiocordyceps camponoti-floridani Ophcf2|03298
Ophiocordyceps camponoti-floridani Ophcf2|04570 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|2502
Ophiocordyceps camponoti-rufipedis Ophun1|6176
Ophiocordyceps kimflemingae Ophio5|3539
Ophiocordyceps kimflemingae Ophio5|7149
Ophiocordyceps subramaniannii Hirsu2|2290
Ophiocordyceps subramaniannii Hirsu2|3753

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04570
MFKRSFRSQDQNRVAKTKKPRDQAKLTKLQRSFSGLRLPQQPSPVVTLAVGRHARLFAAHEEVLGQSPLLAAACR
EGFLASPHGPSPTTMTLADEEPDVFSAVLEYLYKGDYYPRLLHNKRRNSWELEDDARMGHASPSSPDIIGGRDGA
ACVYLSNLDVAVLRDTVIYCAAHRYGLDELKRLALRKQGLQAGIDVATILRSAQYAYAHTPDTDSRLRAHYLALI
IRCRKTFKRSGTMQAEMEAGGSKLFFDLFVAMCNHLDDVIDGHVRSPRTI*
Coding >Ophcf2|04570
ATGTTCAAGCGTTCGTTCCGGTCTCAGGACCAGAATCGCGTGGCCAAGACGAAGAAACCGCGCGATCAGGCCAAG
CTGACCAAGCTGCAGCGCTCCTTCAGCGGACTTCGGCTGCCGCAACAGCCGTCGCCCGTCGTGACGCTCGCCGTC
GGTCGACACGCTCGCCTGTTCGCCGCGCACGAGGAGGTTCTCGGCCAGTCGCCTTTGTTGGCGGCTGCCTGTCGG
GAAGGCTTTCTGGCTTCGCCCCATGGTCCATCGCCGACGACGATGACGCTGGCTGATGAGGAGCCCGACGTCTTT
TCCGCTGTTCTCGAATATCTCTACAAGGGGGACTACTATCCGCGACTGCTTCACAACAAGCGTCGCAACTCTTGG
GAGCTCGAGGACGACGCGCGGATGGGACACGCTTCGCCTTCCAGTCCGGATATCATCGGTGGTCGGGATGGGGCT
GCTTGTGTCTACCTTTCGAACCTGGACGTGGCTGTCCTGCGCGATACTGTCATCTACTGCGCCGCTCACCGGTAC
GGCCTCGACGAGCTCAAGCGTCTGGCCCTTCGAAAGCAGGGGCTTCAGGCGGGCATCGACGTGGCCACCATCCTG
AGATCGGCGCAGTACGCGTACGCCCACACGCCTGATACCGACAGTCGGCTACGGGCTCATTACCTGGCTCTCATC
ATCCGCTGCCGCAAGACGTTTAAGCGTAGCGGTACCATGCAGGCTGAGATGGAGGCTGGTGGCAGCAAGCTGTTC
TTTGACCTTTTTGTCGCCATGTGCAATCACCTCGATGATGTCATTGACGGGCACGTTCGCTCGCCGAGGACGATC
TAG
Transcript >Ophcf2|04570
ATGTTCAAGCGTTCGTTCCGGTCTCAGGACCAGAATCGCGTGGCCAAGACGAAGAAACCGCGCGATCAGGCCAAG
CTGACCAAGCTGCAGCGCTCCTTCAGCGGACTTCGGCTGCCGCAACAGCCGTCGCCCGTCGTGACGCTCGCCGTC
GGTCGACACGCTCGCCTGTTCGCCGCGCACGAGGAGGTTCTCGGCCAGTCGCCTTTGTTGGCGGCTGCCTGTCGG
GAAGGCTTTCTGGCTTCGCCCCATGGTCCATCGCCGACGACGATGACGCTGGCTGATGAGGAGCCCGACGTCTTT
TCCGCTGTTCTCGAATATCTCTACAAGGGGGACTACTATCCGCGACTGCTTCACAACAAGCGTCGCAACTCTTGG
GAGCTCGAGGACGACGCGCGGATGGGACACGCTTCGCCTTCCAGTCCGGATATCATCGGTGGTCGGGATGGGGCT
GCTTGTGTCTACCTTTCGAACCTGGACGTGGCTGTCCTGCGCGATACTGTCATCTACTGCGCCGCTCACCGGTAC
GGCCTCGACGAGCTCAAGCGTCTGGCCCTTCGAAAGCAGGGGCTTCAGGCGGGCATCGACGTGGCCACCATCCTG
AGATCGGCGCAGTACGCGTACGCCCACACGCCTGATACCGACAGTCGGCTACGGGCTCATTACCTGGCTCTCATC
ATCCGCTGCCGCAAGACGTTTAAGCGTAGCGGTACCATGCAGGCTGAGATGGAGGCTGGTGGCAGCAAGCTGTTC
TTTGACCTTTTTGTCGCCATGTGCAATCACCTCGATGATGTCATTGACGGGCACGTTCGCTCGCCGAGGACGATC
TAG
Gene >Ophcf2|04570
ATGTTCAAGCGTTCGTTCCGGTCTCAGGACCAGAATCGCGTGGCCAAGACGAAGAAACCGCGCGATCAGGCCAAG
CTGACCAAGCTGCAGCGCTCCTTCAGCGGACTTCGGCTGCCGCAACAGCCGTCGCCCGTCGTGACGCTCGCCGTC
GGTCGACACGCTCGCCTGTTCGCCGCGCACGAGGAGGTTCTCGGCCAGTCGCCTTTGTTGGCGGCTGCCTGTCGG
GAAGGCTTTCTGGCTTCGCCCCATGGTCCATCGCCGACGACGATGACGCTGGCTGATGAGGAGCCCGACGTCTTT
TCCGCTGTTCTCGAATATCTCTACAAGGGGGACTACTATCCGCGACTGCTTCACAACAAGCGTCGCAACTCTTGG
GAGCTCGAGGACGACGCGCGGATGGGACACGCTTCGCCTTCCAGTCCGGATATCATCGGTGGTCGGGATGGGGCT
GCTTGTGTCTACCTTTCGAACCTGGACGTGGCTGTCCTGCGCGATACTGTCATCTACTGCGCCGCTCACCGGTAC
GGCCTCGACGAGCTCAAGCGTCTGGCCCTTCGAAAGCAGGGGCTTCAGGCGGGCATCGACGTGGCCACCATCCTG
AGATCGGCGCAGTACGCGTACGCCCACACGCCTGATACCGACAGTCGGCTACGGGCTCATTACCTGGCTCTCATC
ATCCGCTGCCGCAAGACGTTTAAGCGTAGCGGTACCATGCAGGCTGAGATGGAGGCTGGTGGCAGCAAGCTGTTC
TTTGACCTTTTTGTCGCCATGTGCAATCACCTCGATGATGTCATTGACGGGCACGTTCGCTCGCCGAGGACGATC
TAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail