Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04569
Gene name
Locationscaffold_04:3606007..3607280
Strand+
Gene length (bp)1273
Transcript length (bp)987
Coding sequence length (bp)987
Protein length (aa) 329

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 41 60 19
2 75 97 22
3 135 157 22
4 208 227 19
5 240 262 22
6 284 306 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04569
MSSTPLLAASGSLPGLNVLQDHPAFLRVSHSPWGCIPQNALVLLRGAMLTYLAATAAMIGHYKLTEESEDSQWRH
FFDFPLISYGLVTLYHVMTFSWTYTHLYYPDADGVEGGIESWVVGAMSLPRNMGSLRKQFYFTLFSATTAVFSFM
NTAIYWFVTRQHEEGGGEFVALPVDSSNELSTLARVASQHAPVRVMDGPFSDIFGEGWYAAYCLVSLYGVTSGLM
ILETLFLNSTKRPIALGSHFLGVMFLSGLYLAWAAVGQSLTEVYPFFWMDEEEVGSKEAVTAYCIAFVFLSPIMY
TLLLGFVGIREGLTRTLSDRGGGVREEL*
Coding >Ophcf2|04569
ATGTCCTCGACACCGCTTCTCGCCGCCTCTGGCAGCCTTCCTGGCCTCAACGTGCTGCAGGACCATCCTGCTTTC
CTCCGCGTCAGCCACTCGCCATGGGGCTGCATCCCCCAGAACGCCCTGGTTCTCTTGAGAGGCGCCATGCTCACC
TACCTCGCTGCTACTGCGGCCATGATCGGCCACTACAAGCTCACGGAGGAGTCCGAGGACAGTCAGTGGCGGCAC
TTTTTCGACTTTCCCCTCATCAGCTACGGCTTGGTGACGCTGTACCATGTCATGACGTTTAGCTGGACCTACACG
CACCTGTATTACCCTGACGCTGACGGCGTTGAAGGCGGCATCGAGTCGTGGGTCGTCGGCGCCATGTCTCTGCCC
AGGAACATGGGTAGCCTGCGGAAGCAGTTCTACTTTACGCTCTTCTCTGCGACCACGGCCGTCTTTTCCTTTATG
AACACTGCAATCTACTGGTTCGTGACGCGCCAGCACGAAGAGGGCGGCGGAGAGTTTGTGGCGTTGCCCGTGGAC
TCCAGCAACGAGTTGTCGACGCTCGCCCGCGTCGCCAGCCAGCACGCACCCGTCCGCGTCATGGACGGTCCTTTC
AGCGACATCTTTGGCGAGGGATGGTATGCCGCCTACTGCCTCGTCAGCTTGTACGGCGTTACGTCGGGCTTGATG
ATTCTCGAGACGCTGTTCCTCAACAGCACCAAGCGGCCGATTGCCCTCGGAAGCCACTTTTTGGGCGTCATGTTC
CTGTCGGGCCTGTACCTCGCCTGGGCAGCGGTGGGACAGAGCCTGACGGAGGTGTACCCCTTCTTTTGGATGGAC
GAGGAAGAGGTTGGCTCCAAGGAAGCGGTGACGGCCTACTGCATCGCCTTTGTGTTTCTCTCTCCCATCATGTAC
ACGCTGCTGTTGGGCTTCGTCGGCATTCGCGAGGGACTGACGCGCACGCTTTCGGACCGCGGTGGCGGCGTACGA
GAGGAGCTGTAG
Transcript >Ophcf2|04569
ATGTCCTCGACACCGCTTCTCGCCGCCTCTGGCAGCCTTCCTGGCCTCAACGTGCTGCAGGACCATCCTGCTTTC
CTCCGCGTCAGCCACTCGCCATGGGGCTGCATCCCCCAGAACGCCCTGGTTCTCTTGAGAGGCGCCATGCTCACC
TACCTCGCTGCTACTGCGGCCATGATCGGCCACTACAAGCTCACGGAGGAGTCCGAGGACAGTCAGTGGCGGCAC
TTTTTCGACTTTCCCCTCATCAGCTACGGCTTGGTGACGCTGTACCATGTCATGACGTTTAGCTGGACCTACACG
CACCTGTATTACCCTGACGCTGACGGCGTTGAAGGCGGCATCGAGTCGTGGGTCGTCGGCGCCATGTCTCTGCCC
AGGAACATGGGTAGCCTGCGGAAGCAGTTCTACTTTACGCTCTTCTCTGCGACCACGGCCGTCTTTTCCTTTATG
AACACTGCAATCTACTGGTTCGTGACGCGCCAGCACGAAGAGGGCGGCGGAGAGTTTGTGGCGTTGCCCGTGGAC
TCCAGCAACGAGTTGTCGACGCTCGCCCGCGTCGCCAGCCAGCACGCACCCGTCCGCGTCATGGACGGTCCTTTC
AGCGACATCTTTGGCGAGGGATGGTATGCCGCCTACTGCCTCGTCAGCTTGTACGGCGTTACGTCGGGCTTGATG
ATTCTCGAGACGCTGTTCCTCAACAGCACCAAGCGGCCGATTGCCCTCGGAAGCCACTTTTTGGGCGTCATGTTC
CTGTCGGGCCTGTACCTCGCCTGGGCAGCGGTGGGACAGAGCCTGACGGAGGTGTACCCCTTCTTTTGGATGGAC
GAGGAAGAGGTTGGCTCCAAGGAAGCGGTGACGGCCTACTGCATCGCCTTTGTGTTTCTCTCTCCCATCATGTAC
ACGCTGCTGTTGGGCTTCGTCGGCATTCGCGAGGGACTGACGCGCACGCTTTCGGACCGCGGTGGCGGCGTACGA
GAGGAGCTGTAG
Gene >Ophcf2|04569
ATGTCCTCGACACCGCTTCTCGCCGCCTCTGGCAGCCTTCCTGGCCTCAACGTGCTGCAGGACCATGTGAGTAGG
CGCAAGACACGCCCCTCCGTCTCCTATCTAAGGCCTCAACAGCCTGCTTTCCTCCGCGTCAGCCACTCGCCATGG
GGCTGCATCCCCCAGAACGCCCTGGTTCTCTTGAGAGGCGCCATGCTCACCTACCTCGCTGCTACTGCGGCCATG
ATCGGCCACTACAAGCTCACGGAGGAGTCCGAGGACAGTCAGTGGCGGCACTTTTTCGACTTTCCCCTCATCAGC
TACGGCTTGGTGACGCTGTACCATGTCATGACGTTTGTGAGTGTCGACGCGTCCTGTATGGGCGACTGGTAACTA
CTGAAGACTGACGACGGCTGCAGAGCTGGACCTACACGCACCTGTATTACCCTGACGCTGACGGCGTTGAAGGCG
GCATCGAGTCGTGGGTCGTCGGCGCCATGTCTCTGCCCAGGAACATGGGTAGCCTGCGGAAGCAGTTCTACTTTA
CGCTCTTCTCTGCGACCACGGCCGTCTTTTCCTTTATGAACACTGCAATCTACTGGTTCGTGACGCGCCAGCACG
AAGAGGGCGGCGGAGAGTTTGTGGCGTTGCCCGTGGACTCCAGCAACGAGTTGTCGACGCTCGCCCGCGTCGCCA
GCCAGCACGCACCCGTCCGCGTCATGGACGGTCCTTGTGCGTTGTTTACCCTTGGAACATGGTTTTCTGACGGCT
GACTCTCGACTACAGTCAGCGACATCTTTGGCGAGGGATGGTATGCCGCCTACTGCCTCGTCAGCTTGTACGGCG
TTACGTCGGGCTTGATGATTCTCGAGACGCTGTTCCTCAACAGCACCAAGCGGCCGATTGTGAGTGTCTACCTGT
TCACGGAGTACGGTGCTACCTAGGTGGCGGCTCCTGACGGCGACGCAGGCCCTCGGAAGCCACTTTTTGGGCGTC
ATGTTCCTGTCGGGCCTGTACCTCGCCTGGGCAGCGGTGGGACAGAGCCTGACGGAGGTGTACCCCTTCTTTTGG
ATGGACGAGGAAGAGGTTGGCTCCAAGGAAGCGGTGACGGCCTACTGCATCGCCTTTGTGTTTCTCTCTCCCATC
AGTGAGTTGGGAAAGATGGTCTCCTCTCTGTCTGGGCGGCGGCTAACGGGCGCCAGTGTACACGCTGCTGTTGGG
CTTCGTCGGCATTCGCGAGGGACTGACGCGCACGCTTTCGGACCGCGGTGGCGGCGTACGAGAGGAGCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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