Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04562
Gene name
Locationscaffold_04:3585306..3585984
Strand-
Gene length (bp)678
Transcript length (bp)573
Coding sequence length (bp)573
Protein length (aa) 191

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06127 Mpo1-like 2-hydroxy-palmitic acid dioxygenase Mpo1-like 3.4E-27 4 159

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.5

Transmembrane Domains

Domain # Start End Length
1 21 43 22
2 63 85 22
3 106 125 19
4 140 157 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04562
MSLDLEKHLTFYGAYHHNSVNVAIHMICVPLILVSAFCMASYTGTLIHTPPWLTMPYLDLNLGTIAALVYASLYI
LLEPVAGFVLAAFCVGSAAFANHLRVESPQTTFNAALVIHIVSWIAQFVGHGKFEGRAPALLDNLVQAVFLAPMF
VWLELLFKLGYRKELQSRVEKAVQVELVKFRQQAKNGKSR*
Coding >Ophcf2|04562
ATGTCTCTCGACCTGGAAAAGCACCTCACCTTTTATGGCGCCTATCATCACAACTCGGTCAACGTGGCCATTCAC
ATGATCTGCGTGCCGCTCATCCTCGTCTCGGCCTTTTGCATGGCTTCTTACACAGGCACCCTGATCCATACGCCC
CCATGGCTGACAATGCCCTATCTCGATCTCAACCTAGGCACCATAGCTGCCCTCGTCTACGCTTCCCTATACATT
CTCCTCGAGCCCGTCGCCGGCTTCGTCCTCGCCGCCTTTTGCGTCGGAAGCGCCGCCTTTGCCAACCATCTCCGC
GTCGAATCCCCTCAGACAACCTTTAACGCCGCCCTCGTCATACACATCGTCTCATGGATCGCCCAGTTCGTCGGC
CACGGAAAATTCGAAGGCCGCGCCCCCGCCCTACTCGACAACTTGGTCCAGGCCGTCTTCCTCGCTCCCATGTTT
GTCTGGCTCGAATTGCTCTTCAAGCTGGGTTACCGCAAGGAGCTGCAGAGTCGAGTGGAAAAGGCGGTCCAGGTC
GAGCTGGTCAAGTTCAGGCAACAGGCGAAGAATGGCAAGAGTCGTTGA
Transcript >Ophcf2|04562
ATGTCTCTCGACCTGGAAAAGCACCTCACCTTTTATGGCGCCTATCATCACAACTCGGTCAACGTGGCCATTCAC
ATGATCTGCGTGCCGCTCATCCTCGTCTCGGCCTTTTGCATGGCTTCTTACACAGGCACCCTGATCCATACGCCC
CCATGGCTGACAATGCCCTATCTCGATCTCAACCTAGGCACCATAGCTGCCCTCGTCTACGCTTCCCTATACATT
CTCCTCGAGCCCGTCGCCGGCTTCGTCCTCGCCGCCTTTTGCGTCGGAAGCGCCGCCTTTGCCAACCATCTCCGC
GTCGAATCCCCTCAGACAACCTTTAACGCCGCCCTCGTCATACACATCGTCTCATGGATCGCCCAGTTCGTCGGC
CACGGAAAATTCGAAGGCCGCGCCCCCGCCCTACTCGACAACTTGGTCCAGGCCGTCTTCCTCGCTCCCATGTTT
GTCTGGCTCGAATTGCTCTTCAAGCTGGGTTACCGCAAGGAGCTGCAGAGTCGAGTGGAAAAGGCGGTCCAGGTC
GAGCTGGTCAAGTTCAGGCAACAGGCGAAGAATGGCAAGAGTCGTTGA
Gene >Ophcf2|04562
ATGTCTCTCGACCTGGAAAAGCACCTCACCTTTGTACGCCATCGATTCTCTTTCTTGACAGCTGTGGCTGATCTC
TCGAAACTGGACAGTATGGCGCCTATCATCACAACTCGGTCAACGTGGCCATTCACATGATCTGCGTGCCGCTCA
TCCTCGTCTCGGCCTTTTGCATGGTACGACAGGTTCACTTACTCGCCATCGCTCTCATTAACAACCCGCCAGGCT
TCTTACACAGGCACCCTGATCCATACGCCCCCATGGCTGACAATGCCCTATCTCGATCTCAACCTAGGCACCATA
GCTGCCCTCGTCTACGCTTCCCTATACATTCTCCTCGAGCCCGTCGCCGGCTTCGTCCTCGCCGCCTTTTGCGTC
GGAAGCGCCGCCTTTGCCAACCATCTCCGCGTCGAATCCCCTCAGACAACCTTTAACGCCGCCCTCGTCATACAC
ATCGTCTCATGGATCGCCCAGTTCGTCGGCCACGGAAAATTCGAAGGCCGCGCCCCCGCCCTACTCGACAACTTG
GTCCAGGCCGTCTTCCTCGCTCCCATGTTTGTCTGGCTCGAATTGCTCTTCAAGCTGGGTTACCGCAAGGAGCTG
CAGAGTCGAGTGGAAAAGGCGGTCCAGGTCGAGCTGGTCAAGTTCAGGCAACAGGCGAAGAATGGCAAGAGTCGT
TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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