Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04558
Gene name
Locationscaffold_04:3572023..3572851
Strand-
Gene length (bp)828
Transcript length (bp)696
Coding sequence length (bp)696
Protein length (aa) 232

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09802 Sec66 Preprotein translocase subunit Sec66 2.2E-76 9 189

GO

GO Term Description Terminal node
GO:0031207 Sec62/Sec63 complex Yes
GO:0031204 post-translational protein targeting to membrane, translocation Yes
GO:0140534 endoplasmic reticulum protein-containing complex No
GO:0051234 establishment of localization No
GO:0070727 cellular macromolecule localization No
GO:0009987 cellular process No
GO:0006810 transport No
GO:0033036 macromolecule localization No
GO:0051649 establishment of localization in cell No
GO:0071702 organic substance transport No
GO:0008104 protein localization No
GO:0006886 intracellular protein transport No
GO:0065002 intracellular protein transmembrane transport No
GO:0032991 protein-containing complex No
GO:0071806 protein transmembrane transport No
GO:0015031 protein transport No
GO:0005575 cellular_component No
GO:0071705 nitrogen compound transport No
GO:0098796 membrane protein complex No
GO:0045184 establishment of protein localization No
GO:0055085 transmembrane transport No
GO:0008150 biological_process No
GO:0046907 intracellular transport No
GO:0051179 localization No
GO:0051641 cellular localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04558
MGMFGVDWKGLALPLAYLVVLGGALMTFSTIYRKRKAAESANLAPWFGPNLQRNIYLSLLHLGPDDGPERRPRAP
ESVLRAALLRRAVQDIERLIQIKSAKQACSTLLLRGSVGDDLWQRFQRAEKEMEEELREVVTEANALAPNWGPTI
FQSAHEMAANARLRQRLDEIQAQTEAEKQWWEKRRGQIRSDFMKELEDSEKSSSKTTSEDDAVLIDTPGSKTTGG
GKKGRK*
Coding >Ophcf2|04558
ATGGGCATGTTCGGCGTCGACTGGAAGGGCCTCGCCCTCCCACTGGCCTACCTGGTGGTCCTAGGCGGCGCCCTC
ATGACCTTTTCCACCATCTACCGGAAGAGAAAAGCCGCCGAGAGCGCGAACCTGGCCCCCTGGTTCGGTCCCAAC
CTCCAGCGCAACATCTACCTCTCTCTCCTACACTTGGGTCCGGATGACGGTCCCGAACGTCGTCCCCGCGCACCG
GAAAGCGTCCTGCGCGCCGCCCTCCTCCGCCGCGCTGTACAGGACATTGAGCGCCTGATCCAGATCAAGTCGGCC
AAGCAGGCCTGCAGCACGCTCTTGCTCCGCGGCAGTGTGGGCGACGACTTGTGGCAGCGCTTCCAGCGGGCAGAG
AAGGAGATGGAGGAGGAGCTACGCGAAGTGGTCACCGAGGCCAACGCCCTGGCTCCCAACTGGGGTCCGACCATC
TTCCAGTCTGCGCACGAAATGGCAGCCAACGCCCGACTCCGACAGCGTCTAGACGAGATTCAAGCGCAGACGGAG
GCGGAGAAGCAATGGTGGGAGAAGCGAAGGGGTCAGATTCGGTCCGACTTTATGAAGGAGCTGGAAGATTCGGAA
AAGAGCTCGTCCAAGACGACGAGCGAGGACGATGCCGTGTTGATTGACACGCCTGGCAGTAAGACGACGGGAGGG
GGCAAGAAGGGCAGGAAATGA
Transcript >Ophcf2|04558
ATGGGCATGTTCGGCGTCGACTGGAAGGGCCTCGCCCTCCCACTGGCCTACCTGGTGGTCCTAGGCGGCGCCCTC
ATGACCTTTTCCACCATCTACCGGAAGAGAAAAGCCGCCGAGAGCGCGAACCTGGCCCCCTGGTTCGGTCCCAAC
CTCCAGCGCAACATCTACCTCTCTCTCCTACACTTGGGTCCGGATGACGGTCCCGAACGTCGTCCCCGCGCACCG
GAAAGCGTCCTGCGCGCCGCCCTCCTCCGCCGCGCTGTACAGGACATTGAGCGCCTGATCCAGATCAAGTCGGCC
AAGCAGGCCTGCAGCACGCTCTTGCTCCGCGGCAGTGTGGGCGACGACTTGTGGCAGCGCTTCCAGCGGGCAGAG
AAGGAGATGGAGGAGGAGCTACGCGAAGTGGTCACCGAGGCCAACGCCCTGGCTCCCAACTGGGGTCCGACCATC
TTCCAGTCTGCGCACGAAATGGCAGCCAACGCCCGACTCCGACAGCGTCTAGACGAGATTCAAGCGCAGACGGAG
GCGGAGAAGCAATGGTGGGAGAAGCGAAGGGGTCAGATTCGGTCCGACTTTATGAAGGAGCTGGAAGATTCGGAA
AAGAGCTCGTCCAAGACGACGAGCGAGGACGATGCCGTGTTGATTGACACGCCTGGCAGTAAGACGACGGGAGGG
GGCAAGAAGGGCAGGAAATGA
Gene >Ophcf2|04558
ATGGGCATGTTCGGCGTCGACTGGAAGGGCCTCGCCCTCCCACTGGCCTACCTGGTGGTCCTAGGCGGCGCCCTC
ATGACCTTTTCCACCATCTACCGGAAGAGAAAAGCCGGTACGTCTCATCTCTTTCTCTCCGAGCATCACAACGGC
TCTCAGAGTCCACAATTGACGAAATGCCAGCCGAGAGCGCGAACCTGGCCCCCTGGTTCGGTCCCAACCTCCAGC
GCAACATCTACCTCTCTCTCCTACACTTGGGTCCGGATGACGGTCCCGAACGTCGTCCCCGCGCACCGGAAAGCG
TCCTGCGCGCCGCCCTCCTCCGCCGCGCTGTACAGGACATTGAGCGCCTGATCCAGATCAAGTCGGCCAAGCAGG
CCTGCAGCACGCTCTTGCTCCGCGGCAGTGTGGGCGACGACTTGTGGCAGCGCTTCCAGCGGGCAGAGAAGGAGA
TGGAGGAGGAGCTACGCGAAGTGGTCACCGAGGTGCGTCTCTCTCTAAACACGGCTGAATCTATAAATTCTACCT
GTTCGCTAAAAGTTCCCCAAGGCCAACGCCCTGGCTCCCAACTGGGGTCCGACCATCTTCCAGTCTGCGCACGAA
ATGGCAGCCAACGCCCGACTCCGACAGCGTCTAGACGAGATTCAAGCGCAGACGGAGGCGGAGAAGCAATGGTGG
GAGAAGCGAAGGGGTCAGATTCGGTCCGACTTTATGAAGGAGCTGGAAGATTCGGAAAAGAGCTCGTCCAAGACG
ACGAGCGAGGACGATGCCGTGTTGATTGACACGCCTGGCAGTAAGACGACGGGAGGGGGCAAGAAGGGCAGGAAA
TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail