© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|04541 |
| Gene name | |
| Location | scaffold_04:3524725..3527694 |
| Strand | - |
| Gene length (bp) | 2969 |
| Transcript length (bp) | 1719 |
| Coding sequence length (bp) | 1719 |
| Protein length (aa) | 573 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.3E-30 | 49 | 401 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 52 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 44 | 66 | 22 |
| 2 | 79 | 101 | 22 |
| 3 | 116 | 138 | 22 |
| 4 | 145 | 164 | 19 |
| 5 | 179 | 201 | 22 |
| 6 | 214 | 236 | 22 |
| 7 | 256 | 278 | 22 |
| 8 | 291 | 313 | 22 |
| 9 | 323 | 345 | 22 |
| 10 | 352 | 374 | 22 |
| 11 | 384 | 406 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|04541 MLQDGGSDTTSTKMMSDSNASELGTEGRRAWASQGMKPWREALLVFTACMAQFCTQTAFFSTLILLRPIGASFGI DSPARLAWLVAAFSLAAGTLIIFCGRLGDVFGHGRMLILGFTWWALWSAISGLSVYSTFYLSVISRAMQGVGPAV TLPNALAVLGTAYPPGHRKAMVFAMFGAVAPVGAVVGGVFSTAVIGIVALVLFSFAWTQAPVDGWSAPSVLVPLV AGLALFGLFLYTETKLSPAPLVPLQALTADVGFVLAAVLFGWASFGVWTLYLVQTLQEARGLSPLMLTAYFCPVA LSGATAAVATGLMLGPLRLGPPTVMTVALAAFTIGSILTAVAPVHQTYWAQLFVAFLVMPVGMDCSFPASTLVVS NAVARRHQGVGASLVSTVVNYGIALGVGFAGTAEMYVRGDPDTVEGRLRGRRIPPFVESVERVSPDVTFLAAHAY ALKQAIDETIFLVKETDKLNMRETQEILVALESVKIEGHRGTEALGKPRDRIKELKLCGFMRTQIYQLQYKFRWL IPHLLDKFPKAAKGVGGTVRITLERFLEDWAKAYTLYNCKNDLYDTA* |
| Coding | >Ophcf2|04541 ATGCTGCAAGATGGCGGCTCGGATACTACGTCGACCAAGATGATGTCGGATTCCAACGCGTCGGAACTCGGCACG GAGGGGAGGAGGGCTTGGGCTTCGCAGGGGATGAAGCCTTGGAGGGAGGCTTTGTTGGTCTTTACTGCTTGCATG GCGCAGTTTTGCACTCAGACGGCCTTCTTTTCTACCCTCATCCTCTTGCGTCCTATCGGCGCCTCGTTCGGTATC GACAGTCCGGCGAGATTGGCCTGGCTCGTGGCCGCCTTCTCCCTCGCAGCCGGTACCCTCATCATCTTCTGCGGA CGTCTGGGCGATGTCTTTGGCCACGGCCGGATGCTCATCTTGGGCTTCACCTGGTGGGCTCTCTGGTCCGCCATC TCGGGCCTATCCGTCTACTCGACCTTTTACCTCTCCGTCATCTCCCGCGCCATGCAAGGCGTAGGCCCGGCCGTG ACGCTCCCCAACGCACTGGCGGTACTGGGAACAGCCTATCCGCCGGGCCATCGCAAGGCCATGGTCTTCGCCATG TTCGGGGCTGTGGCCCCGGTCGGGGCCGTCGTCGGGGGCGTCTTTTCGACCGCAGTCATCGGAATCGTCGCTCTC GTTCTCTTTAGCTTCGCCTGGACGCAAGCGCCCGTCGACGGCTGGTCCGCGCCATCCGTCCTGGTCCCTCTCGTG GCAGGCCTCGCCCTCTTCGGCCTCTTCCTCTACACGGAGACGAAGCTGAGCCCGGCACCGCTGGTCCCCCTCCAG GCTCTAACGGCAGACGTGGGCTTCGTGCTGGCCGCCGTGCTGTTCGGCTGGGCGAGTTTCGGCGTGTGGACGCTG TATCTCGTGCAGACGCTGCAGGAGGCGCGCGGGTTGTCGCCCCTGATGCTGACGGCTTACTTTTGCCCCGTTGCT CTATCGGGTGCGACGGCGGCGGTTGCCACGGGCTTGATGCTGGGGCCTCTACGGCTCGGGCCGCCTACTGTCATG ACGGTCGCCTTGGCTGCCTTTACGATCGGTTCCATACTGACGGCCGTGGCTCCCGTTCATCAGACGTACTGGGCG CAGCTGTTCGTCGCCTTTCTCGTCATGCCCGTCGGTATGGACTGTTCCTTTCCAGCCTCGACGCTCGTCGTGTCC AACGCGGTGGCGAGGAGACACCAGGGGGTCGGGGCGAGTCTCGTGAGCACCGTCGTCAACTACGGCATCGCCCTG GGGGTCGGATTCGCCGGCACGGCGGAGATGTACGTCCGTGGCGATCCGGACACCGTCGAGGGGAGGCTTCGGGGC AGAAGGATACCGCCCTTTGTGGAATCCGTCGAGCGGGTCAGCCCAGACGTCACCTTCCTGGCGGCCCACGCCTAC GCCCTCAAACAGGCCATCGACGAGACCATCTTCCTGGTCAAGGAAACGGACAAGCTCAACATGAGGGAGACGCAG GAGATCCTCGTCGCCCTGGAGAGCGTCAAGATTGAGGGTCATAGGGGCACCGAGGCGCTGGGGAAGCCGAGGGAT CGGATCAAGGAGTTGAAGTTGTGTGGGTTTATGAGGACGCAGATCTATCAGCTTCAGTACAAGTTTCGCTGGTTG ATTCCACATCTGCTCGATAAGTTTCCCAAGGCGGCCAAGGGGGTGGGTGGCACTGTGAGGATTACCCTGGAAAGG TTTCTTGAGGATTGGGCAAAGGCGTATACCTTGTACAATTGCAAGAATGACCTGTATGACACTGCCTAG |
| Transcript | >Ophcf2|04541 ATGCTGCAAGATGGCGGCTCGGATACTACGTCGACCAAGATGATGTCGGATTCCAACGCGTCGGAACTCGGCACG GAGGGGAGGAGGGCTTGGGCTTCGCAGGGGATGAAGCCTTGGAGGGAGGCTTTGTTGGTCTTTACTGCTTGCATG GCGCAGTTTTGCACTCAGACGGCCTTCTTTTCTACCCTCATCCTCTTGCGTCCTATCGGCGCCTCGTTCGGTATC GACAGTCCGGCGAGATTGGCCTGGCTCGTGGCCGCCTTCTCCCTCGCAGCCGGTACCCTCATCATCTTCTGCGGA CGTCTGGGCGATGTCTTTGGCCACGGCCGGATGCTCATCTTGGGCTTCACCTGGTGGGCTCTCTGGTCCGCCATC TCGGGCCTATCCGTCTACTCGACCTTTTACCTCTCCGTCATCTCCCGCGCCATGCAAGGCGTAGGCCCGGCCGTG ACGCTCCCCAACGCACTGGCGGTACTGGGAACAGCCTATCCGCCGGGCCATCGCAAGGCCATGGTCTTCGCCATG TTCGGGGCTGTGGCCCCGGTCGGGGCCGTCGTCGGGGGCGTCTTTTCGACCGCAGTCATCGGAATCGTCGCTCTC GTTCTCTTTAGCTTCGCCTGGACGCAAGCGCCCGTCGACGGCTGGTCCGCGCCATCCGTCCTGGTCCCTCTCGTG GCAGGCCTCGCCCTCTTCGGCCTCTTCCTCTACACGGAGACGAAGCTGAGCCCGGCACCGCTGGTCCCCCTCCAG GCTCTAACGGCAGACGTGGGCTTCGTGCTGGCCGCCGTGCTGTTCGGCTGGGCGAGTTTCGGCGTGTGGACGCTG TATCTCGTGCAGACGCTGCAGGAGGCGCGCGGGTTGTCGCCCCTGATGCTGACGGCTTACTTTTGCCCCGTTGCT CTATCGGGTGCGACGGCGGCGGTTGCCACGGGCTTGATGCTGGGGCCTCTACGGCTCGGGCCGCCTACTGTCATG ACGGTCGCCTTGGCTGCCTTTACGATCGGTTCCATACTGACGGCCGTGGCTCCCGTTCATCAGACGTACTGGGCG CAGCTGTTCGTCGCCTTTCTCGTCATGCCCGTCGGTATGGACTGTTCCTTTCCAGCCTCGACGCTCGTCGTGTCC AACGCGGTGGCGAGGAGACACCAGGGGGTCGGGGCGAGTCTCGTGAGCACCGTCGTCAACTACGGCATCGCCCTG GGGGTCGGATTCGCCGGCACGGCGGAGATGTACGTCCGTGGCGATCCGGACACCGTCGAGGGGAGGCTTCGGGGC AGAAGGATACCGCCCTTTGTGGAATCCGTCGAGCGGGTCAGCCCAGACGTCACCTTCCTGGCGGCCCACGCCTAC GCCCTCAAACAGGCCATCGACGAGACCATCTTCCTGGTCAAGGAAACGGACAAGCTCAACATGAGGGAGACGCAG GAGATCCTCGTCGCCCTGGAGAGCGTCAAGATTGAGGGTCATAGGGGCACCGAGGCGCTGGGGAAGCCGAGGGAT CGGATCAAGGAGTTGAAGTTGTGTGGGTTTATGAGGACGCAGATCTATCAGCTTCAGTACAAGTTTCGCTGGTTG ATTCCACATCTGCTCGATAAGTTTCCCAAGGCGGCCAAGGGGGTGGGTGGCACTGTGAGGATTACCCTGGAAAGG TTTCTTGAGGATTGGGCAAAGGCGTATACCTTGTACAATTGCAAGAATGACCTGTATGACACTGCCTAG |
| Gene | >Ophcf2|04541 ATGCTGCAAGATGGCGGCTCGGATACTACGTCGACCAAGATGATGTCGGATTCCAACGCGTCGGAACTCGGCACG GAGGGGAGGAGGGCTTGGGCTTCGCAGGGGATGAAGCCTTGGAGGGAGGCTTTGTTGGTCTTTACTGCTTGCATG GCGCAGTTTTGCACTCGTGAGAGACATGTTTGAATTTGAGGGGAGATGCTAATGATGATTGGTGTGTTTGATCAG AGACGGCCTTCTTTTCTACCCTCATCCTCTTGCGTCCTATCGGCGCCTCGTTCGGTATCGACAGTCCGGCGAGAT TGGCCTGGCTCGTGGCCGCCTTCTCCCTCGCAGCCGGTACCCTCATCATCTTCTGCGGACGTCTGGGCGATGTCT TTGGCCACGGCCGGATGCTCATCTTGGGCTTCACCTGGTGGGCTCTCTGGTCCGCCATCTCGGGCCTATCCGTCT ACTCGACCTTTTACCTCTCCGTCATCTCCCGCGCCATGCAAGGCGTAGGCCCGGCCGTGACGCTCCCCAACGCAC TGGCGGTACTGGGAACAGCCTATCCGCCGGGCCATCGCAAGGCCATGGTCTTCGCCATGTTCGGGGCTGTGGCCC CGGTCGGGGCCGTCGTCGGGGGCGTCTTTTCGAGTCTGTTGGCCGAGGTTTGGTGGCCTTGGGCTATGTGGGTTT TTGCCCTCTGGTTGCTCGTTTTGGCGGTTTTGGCGGGTTTTGCCGTGCCTTTGAGGGACGAGCTTGGAAGGCATG GTGATGGTGATGGTGATGGTGATGGTGATGGTGACGGTCAAGGTGATGACGATGATGAGAAGCGAGTTGCTTCTT CTGCGTCGCGTGGGTTGAAGGATACTTTGCTCGCACTCGACGTTCCAGCCGCAGTCATCGGAATCGTCGCTCTCG TTCTCTTTAGCTTCGCCTGGACGCAAGCGCCCGTCGACGGCTGGTCCGCGCCATCCGTCCTGGTCCCTCTCGTGG CAGGCCTCGCCCTCTTCGGCCTCTTCCTCTACACGGAGACGAAGCTGAGCCCGGCACCGCTGGTCCCCCTCCAGG CTCTAACGGCAGACGTGGGCTTCGTGCTGGCCGCCGTGCTGTTCGGCTGGGCGAGTTTCGGCGTGTGGACGCTGT ATCTCGTGCAGACGCTGCAGGAGGCGCGCGGGTTGTCGCCCCTGATGCTGACGGCTTACTTTTGCCCCGTTGCTC TATCGGGTGCGACGGCGGCGGTTGCCACGGGCTTGATGCTGGGGCCTCTACGGCTCGGGCCGCCTACTGTCATGA CGGTCGCCTTGGCTGCCTTTACGATCGGTTCCATACTGACGGCCGTGGCTCCCGTTCATCAGACGTACTGGGCGC AGCTGTTCGTCGCCTTTCTCGTCATGCCCGTCGGTATGGACTGTTCCTTTCCAGCCTCGACGCTCGTCGTGTCCA ACGCGGTGGCGAGGAGACACCAGGGGGTCGGGGCGAGTCTCGTGAGCACCGTCGTCAACTACGGCATCGCCCTGG GGGTCGGATTCGCCGGCACGGCGGAGATGTACGTCCGTGGCGATCCGGACACCGTCGAGGGGAGGCTTCGGGGGT TCCGGGGGCCTTGTTTGTGGGGGTCGGGCTTGCGGGGTTGGGGTTGGTGGTTTGTTTGGCGTTTGTTGCGAGGGA AGAGGGGGGTTTAGGAGGGGATCGTGATGGGGGTTGTGATGGGGGGTTGTGATGGGCCTTTGCGTTGAGTTGGGG GGGGGGTTGCATAGAGCTGGGTTGGCTTGCGATGGGATCTTGGCTAGGCATTGCTAGAGTATATGATGGAGTAAA ATCGGGGGGATATGGTTGTATAAGGGTAGGAGATGCATGAATGATGATGGATGTTGTTTCAATCGGCAGGATAGC TCCGTCTAGAGATGTACGGGTAATGCAAGAGGCTCAGCTTTAACTAGACAGAAGTCTATGTAGGGATAGAGCCTT CCTACGAATGAATACATGCCCATAGAAGGCCAGAGAGTGCTCTGCTCCCCTTGTTTGACGTGGAGCAAACACACA CACACACACACACACACTTACACACACACTTACACACACACTTACACGGCTCGGAGGCAGCTGACTCGTCGACCT CTATCTAACATGTGCTCCCGCTCTTGTGCGGGGACTAATGCGCAGATGGTTCTGCTAATGCTTGCCCAAAGTCAG CTCCGTTGCCTGACCGTCATGACGGGAGTAGTCATGATGTCGGAGGAGGCTGTGCTTGGTTATTTAAGGGGGAGT GACTACTCGGGAGCTTGTCTGCTGGTTACCCTGGCAGTCTCTTCTCTTTTGCGTGGACGTCATCTTTCAAGCCGA AGAGACTACAGCTTCTCGTTCCGGAATAGCTTCTTCCCATTCCTCCCAACGTCTACTCGGAAAGCTCGACTTGAT TATTCACGATGAAATTCTTGCTCCCCCTTTTCTTCCTGGTGGCCGTGGTCACCGCCCGCGAAATCCCCGACGTCT TCATCGTCAACACGCCCACCAAACTCCGAAAAAGCATCGAAGCCATCAGCAGAAGGATACCGCCCTTTGTGGAAT CCGTCGAGCGGGTCAGCCCAGACGTCACCTTCCTGGCGGCCCACGCCTACGCCCTCAAACAGGCCATCGACGAGA CCATCTTCCTGGTCAAGGAAACGGACAAGCTCAACATGAGGGAGACGCAGGAGATCCTCGTCGCCCTGGAGAGCG TCAAGATTGAGGGTCATAGGGGCACCGAGGCGCTGGGGAAGCCGAGGGATCGGATCAAGGAGTTGAAGTTGTGTG GGTTTATGAGGACGCAGATCTATCAGCTTCAGTACAAGTTTCGCTGGTTGATTCCACATCTGCTCGATAAGTTTC CCAAGGCGGCCAAGGGGGTGGGTGGCACTGTGAGGATTACCCTGGAAAGGTTTCTTGAGGATTGGGCAAAGGCGT ATACCTTGTACAATTGCAAGAATGACCTGTATGACACTGCCTAG |