Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04512
Gene name
Locationscaffold_04:3453640..3454853
Strand+
Gene length (bp)1213
Transcript length (bp)1047
Coding sequence length (bp)1047
Protein length (aa) 349

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 242 264 22
2 279 298 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04512
MLLSHNFTTSLTTGFIKGTPSSDIPAALHHMLQCGSQHSPTTAHGLLLPTIMLSLDLSPAHDQKQREARDWLRHL
ENAVSLRDEVEAHERYAPDGLLEIDGLSRDLVECHGHVMWKRPQAYRALVGEMEVAMGRFRDEVERRGCGCHGHG
VDDDDLASRQLSHHKDLLRLHASITARLEFYRVKLTGLENYVHTTLARLKVQREALYNIMSQREARLNLEIAGEQ
RRIAHASKRDSTAMKTISLMGAVFLPGTYLASVFSTSFFDFKPTSSRVASDLWIYFIVTIPLTAAIVGSWWWWDR
RREAQFARDDEDLEKNIDKMEKDIMFHLRKRTMSKAHTWNTISAPPRP*
Coding >Ophcf2|04512
ATGCTCCTCTCCCACAACTTCACCACCAGCCTAACAACAGGCTTCATCAAAGGCACCCCCAGCAGCGACATCCCC
GCCGCCCTACACCACATGCTCCAATGCGGAAGCCAACACAGCCCCACGACAGCCCACGGCCTGCTGCTCCCAACG
ATAATGCTATCGTTGGACCTGTCACCCGCGCACGATCAGAAGCAGCGCGAGGCGCGGGACTGGCTTCGTCACTTG
GAGAACGCGGTCAGTTTGAGGGATGAGGTCGAGGCGCATGAGCGGTATGCGCCCGATGGGTTGCTGGAGATTGAT
GGGTTGAGTAGGGATTTGGTCGAGTGTCATGGGCATGTTATGTGGAAGAGGCCGCAGGCTTATCGGGCTTTGGTT
GGGGAGATGGAGGTTGCCATGGGGAGGTTTCGAGATGAGGTTGAGCGGCGTGGTTGCGGTTGTCATGGTCATGGT
GTTGACGATGATGACCTCGCCAGCAGACAACTCTCCCACCACAAAGACCTCCTCCGCTTACACGCCAGCATAACC
GCTCGCCTCGAATTCTACCGCGTCAAACTAACAGGCCTAGAAAACTACGTTCACACCACCCTCGCCCGCCTCAAA
GTCCAACGCGAAGCCCTCTACAACATCATGTCCCAACGCGAAGCCCGCCTCAACCTCGAAATCGCAGGTGAACAA
CGCCGCATCGCCCACGCAAGTAAGCGCGATAGCACAGCCATGAAGACCATTTCCCTCATGGGAGCCGTCTTCTTA
CCGGGCACCTATCTAGCCTCCGTCTTCTCCACGTCCTTTTTCGACTTTAAGCCCACTTCGTCGCGGGTGGCTTCT
GATCTTTGGATCTACTTCATCGTCACTATCCCTCTTACTGCCGCCATTGTTGGCTCTTGGTGGTGGTGGGATCGT
CGGCGGGAGGCGCAGTTTGCGCGTGATGATGAGGATTTGGAGAAGAATATTGATAAGATGGAGAAGGATATCATG
TTTCATCTTCGGAAGCGCACCATGAGCAAGGCTCATACTTGGAACACCATCAGCGCGCCGCCGAGGCCGTAG
Transcript >Ophcf2|04512
ATGCTCCTCTCCCACAACTTCACCACCAGCCTAACAACAGGCTTCATCAAAGGCACCCCCAGCAGCGACATCCCC
GCCGCCCTACACCACATGCTCCAATGCGGAAGCCAACACAGCCCCACGACAGCCCACGGCCTGCTGCTCCCAACG
ATAATGCTATCGTTGGACCTGTCACCCGCGCACGATCAGAAGCAGCGCGAGGCGCGGGACTGGCTTCGTCACTTG
GAGAACGCGGTCAGTTTGAGGGATGAGGTCGAGGCGCATGAGCGGTATGCGCCCGATGGGTTGCTGGAGATTGAT
GGGTTGAGTAGGGATTTGGTCGAGTGTCATGGGCATGTTATGTGGAAGAGGCCGCAGGCTTATCGGGCTTTGGTT
GGGGAGATGGAGGTTGCCATGGGGAGGTTTCGAGATGAGGTTGAGCGGCGTGGTTGCGGTTGTCATGGTCATGGT
GTTGACGATGATGACCTCGCCAGCAGACAACTCTCCCACCACAAAGACCTCCTCCGCTTACACGCCAGCATAACC
GCTCGCCTCGAATTCTACCGCGTCAAACTAACAGGCCTAGAAAACTACGTTCACACCACCCTCGCCCGCCTCAAA
GTCCAACGCGAAGCCCTCTACAACATCATGTCCCAACGCGAAGCCCGCCTCAACCTCGAAATCGCAGGTGAACAA
CGCCGCATCGCCCACGCAAGTAAGCGCGATAGCACAGCCATGAAGACCATTTCCCTCATGGGAGCCGTCTTCTTA
CCGGGCACCTATCTAGCCTCCGTCTTCTCCACGTCCTTTTTCGACTTTAAGCCCACTTCGTCGCGGGTGGCTTCT
GATCTTTGGATCTACTTCATCGTCACTATCCCTCTTACTGCCGCCATTGTTGGCTCTTGGTGGTGGTGGGATCGT
CGGCGGGAGGCGCAGTTTGCGCGTGATGATGAGGATTTGGAGAAGAATATTGATAAGATGGAGAAGGATATCATG
TTTCATCTTCGGAAGCGCACCATGAGCAAGGCTCATACTTGGAACACCATCAGCGCGCCGCCGAGGCCGTAG
Gene >Ophcf2|04512
ATGCTCCTCTCCCACAACTTCACCACCAGCCTAACAACAGGCTTCATCAAAGGCACCCCCAGCAGCGACATCCCC
GCCGCCCTACACCACATGCTCCAATGCGGAAGCCAACACAGCCCCACGACAGCCCACGGCCTGCTGCTCCCAACG
ATAATGCTATCGTTGGACCTGTCACCCGCGCACGATCAGAAGCAGCGCGAGGCGCGGGACTGGCTTCGTCACTTG
GAGAACGCGGTCAGTTTGAGGGATGAGGTCGAGGCGCATGAGCGGTATGCGCCCGATGGGTTGCTGGAGATTGAT
GGGTTGAGTAGGGATTTGGTCGAGTGTCATGGGCATGTTATGTGGAAGAGGCCGCAGGCTTATCGGGCTTTGGTT
GGGGAGATGGAGGTTGCCATGGGGAGGTTTCGAGATGAGGTTGAGCGGCGTGGTTGCGGTTGTCATGGTCATGGT
GTTGACGATGATGACCTCGCCAGCAGACAACTCTCCCACCACAAAGACCTCCTCCGCTTACACGCCAGCATAACC
GCTCGCCTCGAATTCTACCGCGTCAAACTAACAGGCCTAGAAAACTACGTTCACACCACCCTCGCCCGCCTCAAA
GTCCAACGCGAAGCCGTCCGTCTCCATACCTAAGCTCTTCCCACACCCCTTGGACTCCTACAAAGAAAACGCTGT
AAACTGACACGATATAAAAAAAACCCGCAGCTCTACAACATCATGTCCCAACGCGAAGCCCGCCTCAACCTCGAA
ATCGCAGGTGAACAACGCCGCATCGCCCACGCAAGTAAGCGCGATAGCACAGCCATGAAGACCATTTCCCTCATG
GGAGCCGTCTTCTTACCGGGCACCTATCTAGCCTCCGTCTTCTCCACGTCCTTTTTCGACTTTAAGCCCAGTTGC
GTTGCCCGCTCTCGTCTTTGTTCCCCCCCTTTTTGAAATGGGTCGTGCGTCTTAACCCATGTTATTTATAGCTTC
GTCGCGGGTGGCTTCTGATCTTTGGATCTACTTCATCGTCACTATCCCTCTTACTGCCGCCATTGTTGGCTCTTG
GTGGTGGTGGGATCGTCGGCGGGAGGCGCAGTTTGCGCGTGATGATGAGGATTTGGAGAAGAATATTGATAAGAT
GGAGAAGGATATCATGTTTCATCTTCGGAAGCGCACCATGAGCAAGGCTCATACTTGGAACACCATCAGCGCGCC
GCCGAGGCCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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