Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04482
Gene name
Locationscaffold_04:3370952..3372643
Strand+
Gene length (bp)1691
Transcript length (bp)1488
Coding sequence length (bp)1488
Protein length (aa) 496

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01699 Na_Ca_ex Sodium/calcium exchanger protein 1.2E-20 97 263
PF01699 Na_Ca_ex Sodium/calcium exchanger protein 6.4E-22 336 477

GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0008150 biological_process No
GO:0031224 intrinsic component of membrane No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0110165 cellular anatomical entity No
GO:0051234 establishment of localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 71 93 22
2 97 116 19
3 129 151 22
4 161 183 22
5 204 226 22
6 239 261 22
7 331 353 22
8 368 390 22
9 403 425 22
10 435 452 17
11 459 481 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04482
MSSQTEPGAGAGERTALLPHGSSSAEDASARPQGSSAYALFLDQRHTPGRDSQRLPVRSAARFWHVTKVTLLSNY
VNFFLVTVPVGIVAGSMSWNPVAVFTINFLAIIPLAAVLSFATEEIANRLGEAMGGLLSATFGNAVELIVSIVAL
RDGQIEVVQSSMLGSILSNLLLVMGTCFLLGGIRNRGTSGDGSQQEFTEAVAQTTCSLMTLASASLVLPAALYTV
MNKTGSGGKNMQDIILVLSHGTAVLLLLLYVAYLIFQLRTHSNLFDAELQKLLKEEEAAARAGQGSNSQAQNGTR
EPQNSTANNVQVQNTSTSPQPEEDVEPQMGPLAALTVLVITTILVAICADYLVKSIDAVVEKENISKTFIGLILI
PIVGNAAEHVTAVVMAVRNKMNLAMGVAIGSSIQIALGLTPFLVIVGWIMGQPMSLHFETFATVAFAISVLVATY
VIQDGKSNYLEGAMLIGLYIIIAVAFYVAPGDALHKVPPPPGGLA*
Coding >Ophcf2|04482
ATGAGCTCACAGACGGAGCCGGGCGCCGGAGCCGGAGAGCGCACGGCCCTTCTCCCCCATGGTTCGTCTTCCGCA
GAGGACGCTTCGGCCCGGCCTCAGGGGTCGTCTGCCTACGCCCTCTTCCTCGATCAGAGACATACTCCCGGGAGA
GATAGCCAGAGACTGCCCGTCAGGTCTGCTGCTCGCTTCTGGCACGTCACCAAGGTGACTCTTCTCAGCAACTAT
GTCAACTTTTTCCTCGTCACCGTGCCCGTCGGCATCGTCGCCGGCTCCATGTCGTGGAACCCCGTCGCCGTCTTC
ACCATCAACTTCCTGGCCATCATCCCGCTTGCCGCCGTCTTGTCCTTCGCCACCGAGGAGATCGCCAACAGGCTC
GGTGAAGCTATGGGCGGGCTCCTCAGTGCCACCTTTGGCAACGCCGTTGAACTCATCGTTAGCATCGTCGCCCTC
AGAGACGGCCAGATCGAAGTCGTCCAGTCCTCGATGCTGGGCTCTATTCTATCCAACCTGCTGCTCGTCATGGGC
ACGTGCTTTCTTCTCGGTGGCATTCGCAACCGGGGTACAAGCGGCGACGGCTCACAGCAAGAGTTTACAGAGGCT
GTCGCGCAGACGACGTGCTCTTTGATGACGCTGGCATCCGCTTCTCTCGTCCTCCCTGCCGCTCTGTATACCGTC
ATGAATAAGACCGGCTCCGGCGGAAAGAACATGCAGGACATTATCCTCGTTCTCTCCCATGGAACAGCCGTTCTA
CTGCTCTTGCTCTATGTCGCGTATCTCATCTTTCAGCTCCGCACACATAGCAATCTCTTTGATGCCGAGCTGCAG
AAACTGTTGAAGGAAGAAGAGGCCGCTGCGCGCGCCGGACAGGGAAGCAATAGCCAGGCTCAGAACGGCACGAGG
GAACCCCAGAACTCCACGGCCAACAACGTCCAGGTCCAGAACACCAGTACCTCTCCTCAGCCCGAGGAAGACGTC
GAACCGCAAATGGGCCCCTTGGCCGCCCTCACCGTCCTCGTCATCACCACCATCCTCGTCGCCATCTGCGCAGAC
TATCTCGTCAAGAGCATAGACGCCGTCGTCGAAAAGGAAAACATAAGCAAGACCTTTATCGGACTCATCCTCATC
CCCATCGTCGGCAACGCAGCCGAGCACGTCACCGCCGTCGTCATGGCGGTCCGAAACAAGATGAATCTAGCCATG
GGCGTCGCCATCGGGTCCTCGATTCAGATTGCGCTTGGCCTCACTCCGTTTTTGGTCATCGTCGGTTGGATCATG
GGTCAGCCCATGAGTCTTCACTTCGAGACGTTTGCGACGGTGGCCTTTGCTATATCCGTCTTGGTTGCTACCTAC
GTTATCCAGGATGGCAAGTCCAACTATCTCGAAGGTGCCATGCTCATCGGGCTGTACATCATCATCGCCGTCGCC
TTTTACGTCGCGCCCGGCGATGCTTTGCACAAGGTTCCGCCGCCGCCGGGAGGTCTGGCGTAG
Transcript >Ophcf2|04482
ATGAGCTCACAGACGGAGCCGGGCGCCGGAGCCGGAGAGCGCACGGCCCTTCTCCCCCATGGTTCGTCTTCCGCA
GAGGACGCTTCGGCCCGGCCTCAGGGGTCGTCTGCCTACGCCCTCTTCCTCGATCAGAGACATACTCCCGGGAGA
GATAGCCAGAGACTGCCCGTCAGGTCTGCTGCTCGCTTCTGGCACGTCACCAAGGTGACTCTTCTCAGCAACTAT
GTCAACTTTTTCCTCGTCACCGTGCCCGTCGGCATCGTCGCCGGCTCCATGTCGTGGAACCCCGTCGCCGTCTTC
ACCATCAACTTCCTGGCCATCATCCCGCTTGCCGCCGTCTTGTCCTTCGCCACCGAGGAGATCGCCAACAGGCTC
GGTGAAGCTATGGGCGGGCTCCTCAGTGCCACCTTTGGCAACGCCGTTGAACTCATCGTTAGCATCGTCGCCCTC
AGAGACGGCCAGATCGAAGTCGTCCAGTCCTCGATGCTGGGCTCTATTCTATCCAACCTGCTGCTCGTCATGGGC
ACGTGCTTTCTTCTCGGTGGCATTCGCAACCGGGGTACAAGCGGCGACGGCTCACAGCAAGAGTTTACAGAGGCT
GTCGCGCAGACGACGTGCTCTTTGATGACGCTGGCATCCGCTTCTCTCGTCCTCCCTGCCGCTCTGTATACCGTC
ATGAATAAGACCGGCTCCGGCGGAAAGAACATGCAGGACATTATCCTCGTTCTCTCCCATGGAACAGCCGTTCTA
CTGCTCTTGCTCTATGTCGCGTATCTCATCTTTCAGCTCCGCACACATAGCAATCTCTTTGATGCCGAGCTGCAG
AAACTGTTGAAGGAAGAAGAGGCCGCTGCGCGCGCCGGACAGGGAAGCAATAGCCAGGCTCAGAACGGCACGAGG
GAACCCCAGAACTCCACGGCCAACAACGTCCAGGTCCAGAACACCAGTACCTCTCCTCAGCCCGAGGAAGACGTC
GAACCGCAAATGGGCCCCTTGGCCGCCCTCACCGTCCTCGTCATCACCACCATCCTCGTCGCCATCTGCGCAGAC
TATCTCGTCAAGAGCATAGACGCCGTCGTCGAAAAGGAAAACATAAGCAAGACCTTTATCGGACTCATCCTCATC
CCCATCGTCGGCAACGCAGCCGAGCACGTCACCGCCGTCGTCATGGCGGTCCGAAACAAGATGAATCTAGCCATG
GGCGTCGCCATCGGGTCCTCGATTCAGATTGCGCTTGGCCTCACTCCGTTTTTGGTCATCGTCGGTTGGATCATG
GGTCAGCCCATGAGTCTTCACTTCGAGACGTTTGCGACGGTGGCCTTTGCTATATCCGTCTTGGTTGCTACCTAC
GTTATCCAGGATGGCAAGTCCAACTATCTCGAAGGTGCCATGCTCATCGGGCTGTACATCATCATCGCCGTCGCC
TTTTACGTCGCGCCCGGCGATGCTTTGCACAAGGTTCCGCCGCCGCCGGGAGGTCTGGCGTAG
Gene >Ophcf2|04482
ATGAGCTCACAGACGGAGCCGGGCGCCGGAGCCGGAGAGCGCACGGCCCTTCTCCCCCATGGTTCGTCTTCCGCA
GAGGACGCTTCGGCCCGGCCTCAGGGGTCGTCTGCCTACGCCCTCTTCCTCGATCAGAGACATACTCCCGGGAGA
GATAGCCAGAGACTGCCCGTCAGGTCTGCTGCTCGCTTCTGGCACGTCACCAAGGTGACTCTTCTCAGCAGTCAG
TCTACTATACCTGATCAGCTTTCTGTCCTCCAAGTCTGACCGTCGATAGACTATGTCAACTTTTTCCTCGTCACC
GTGCCCGTCGGCATCGTCGCCGGCTCCATGTCGTGGAACCCCGTCGCCGTCTTCACCATCAACTTCCTGGCCATC
ATCCCGCTTGCCGCCGTCTTGTCCTTCGCCACCGAGGAGATCGCCAACAGGCTCGGTGAAGCTATGGGCGGGCTC
CTCAGTGCCACCTTTGGCAACGCCGTTGAACTCATCGTGCGTACTCGATTTCTTCGACTCGACTCAGAAACTCAT
CTGTCCTAGGTTAGCATCGTCGCCCTCAGAGACGGCCAGATCGAAGTCGTCCAGTCCTCGATGCTGGGCTCTATT
CTATCCAACCTGCTGCTCGTCATGGGCACGTGCTTTCTTCTCGGTGGCATTCGCAACCGGGGTACAAGCGGCGAC
GGCTCACAGCAAGAGTTTACAGAGGCTGTCGCGCAGACGACGTGCTCTTTGATGACGCTGGCATCCGCTTCTCTC
GTCCTCCCTGCCGCTGTAGGATGCCCCGATTCCTTGGACGATCCCGTCTTACTGATCTCGGCCGACGCAGCTGTA
TACCGTCATGAATAAGACCGGCTCCGGCGGAAAGAACATGCAGGACATTATCCTCGTTCTCTCCCATGGAACAGC
CGTTCTACTGCTCTTGCTCTATGTCGCGTATCTCATCTTTCAGCTCCGCACACATAGCAATCTCTTTGATGCCGA
GCTGCAGAAACTGTTGAAGGAAGAAGAGGCCGCTGCGCGCGCCGGACAGGGAAGCAATAGCCAGGCTCAGAACGG
CACGAGGGAACCCCAGAACTCCACGGCCAACAACGTCCAGGTCCAGAACACCAGTACCTCTCCTCAGCCCGAGGA
AGACGTCGAACCGCAAATGGGCCCCTTGGCCGCCCTCACCGTCCTCGTCATCACCACCATCCTCGTCGCCATCTG
CGCAGACTATCTCGTCAAGAGCATAGACGCCGTCGTCGAAAAGGAAAACATAAGCAAGACCTTTATCGGACTCAT
CCTCATCCCCATCGTCGGCAACGCAGCCGAGCACGTCACCGCCGTCGTCATGGCGGTCCGAAACAAGATGAATCT
AGCCATGGGCGTCGCCATCGGGTCCTCGATTCAGATTGCGCTTGGCCTCACTCCGTTTTTGGTCATCGTCGGTTG
GATCATGGGTCAGCCCATGAGTCTTCACTTCGAGACGTGTAAGTCCCGCGTCACCAATCATCATGGCAGGGCTGA
CAGGAACAGTTGCGACGGTGGCCTTTGCTATATCCGTCTTGGTTGCTACCTACGTTATCCAGGATGGCAAGTCCA
ACTATCTCGAAGGTGCCATGCTCATCGGGCTGTACATCATCATCGCCGTCGCCTTTTACGTCGCGCCCGGCGATG
CTTTGCACAAGGTTCCGCCGCCGCCGGGAGGTCTGGCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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