Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04471
Gene name
Locationscaffold_04:3335601..3336806
Strand+
Gene length (bp)1205
Transcript length (bp)1029
Coding sequence length (bp)1029
Protein length (aa) 343

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 69 0.5

Transmembrane Domains

Domain # Start End Length
1 133 155 22
2 185 207 22
3 227 249 22
4 286 305 19
5 317 339 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04471
MAPTTRSSSTGSLERVPEDATVAARDESRGRTMAAKRGARGGGGGGGGGGGVVSCGKFAFPLLVVASFCLASWGY
SLVGEVSGGRLAAVSRSQESGGEIAVLVGWRMLELGLAWFGGLRALDVAMLDLLAHGPLFYLQATFYSLGVKTAA
SALLVDVLSASLPFHLLRPPTNHHHSSPPDLQLHLYTTALASSIYTITIALSQRLLLPRILALHFRGLATLEPAY
AASYTAVLPATAVFGAAAAAFIYVPSSTTTGDDAQALDPVTASLGETLRWNLWGYSSRTKLVVRRTCLVMLLVAG
NTYLSCTRGLYGVEAHGALVYAAVWVGAAACTGLALGLVGGV*
Coding >Ophcf2|04471
ATGGCGCCAACGACGCGGAGCAGCTCTACGGGATCACTGGAGCGGGTACCCGAAGACGCGACAGTCGCTGCGAGG
GACGAGAGCAGGGGGCGGACGATGGCAGCGAAGCGGGGAGCGCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GGCGTGGTATCGTGCGGGAAGTTCGCGTTCCCTTTGCTGGTGGTTGCGAGTTTCTGCCTGGCGAGTTGGGGGTAT
AGTCTTGTGGGGGAGGTTAGCGGTGGGAGGTTGGCGGCTGTGAGTCGGAGTCAGGAGTCTGGGGGGGAGATTGCC
GTCTTGGTAGGGTGGAGGATGTTGGAGCTCGGGCTTGCTTGGTTTGGCGGCTTGCGTGCTTTGGATGTTGCCATG
TTGGATCTTCTTGCTCATGGGCCTTTGTTCTATCTCCAGGCCACCTTTTACTCCCTCGGCGTCAAGACAGCAGCC
TCAGCACTCCTAGTCGACGTCCTCTCCGCCTCCCTCCCCTTCCATCTCCTCCGTCCACCAACCAACCACCACCAC
TCCTCCCCCCCGGACCTCCAACTCCACCTCTACACAACCGCCCTCGCATCCAGCATCTACACCATAACCATCGCC
CTCTCCCAACGACTCCTCCTCCCCCGCATCCTAGCCCTCCACTTCCGAGGCCTAGCAACTCTCGAGCCCGCCTAC
GCAGCCTCCTACACGGCCGTCCTCCCCGCCACGGCCGTCTTCGGCGCCGCCGCCGCAGCCTTCATCTACGTGCCC
TCCTCGACGACGACCGGCGATGACGCCCAGGCGCTCGATCCCGTCACGGCCTCGCTGGGCGAGACGCTGCGCTGG
AATCTCTGGGGGTATTCTTCCAGGACCAAGCTTGTCGTCAGGAGGACTTGCCTGGTCATGCTCCTCGTCGCCGGG
AACACCTACCTTTCCTGCACGAGGGGGTTGTACGGCGTCGAGGCCCACGGGGCGCTCGTCTATGCGGCTGTCTGG
GTTGGCGCCGCGGCTTGTACGGGGTTGGCTCTCGGGTTGGTGGGCGGTGTCTAG
Transcript >Ophcf2|04471
ATGGCGCCAACGACGCGGAGCAGCTCTACGGGATCACTGGAGCGGGTACCCGAAGACGCGACAGTCGCTGCGAGG
GACGAGAGCAGGGGGCGGACGATGGCAGCGAAGCGGGGAGCGCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GGCGTGGTATCGTGCGGGAAGTTCGCGTTCCCTTTGCTGGTGGTTGCGAGTTTCTGCCTGGCGAGTTGGGGGTAT
AGTCTTGTGGGGGAGGTTAGCGGTGGGAGGTTGGCGGCTGTGAGTCGGAGTCAGGAGTCTGGGGGGGAGATTGCC
GTCTTGGTAGGGTGGAGGATGTTGGAGCTCGGGCTTGCTTGGTTTGGCGGCTTGCGTGCTTTGGATGTTGCCATG
TTGGATCTTCTTGCTCATGGGCCTTTGTTCTATCTCCAGGCCACCTTTTACTCCCTCGGCGTCAAGACAGCAGCC
TCAGCACTCCTAGTCGACGTCCTCTCCGCCTCCCTCCCCTTCCATCTCCTCCGTCCACCAACCAACCACCACCAC
TCCTCCCCCCCGGACCTCCAACTCCACCTCTACACAACCGCCCTCGCATCCAGCATCTACACCATAACCATCGCC
CTCTCCCAACGACTCCTCCTCCCCCGCATCCTAGCCCTCCACTTCCGAGGCCTAGCAACTCTCGAGCCCGCCTAC
GCAGCCTCCTACACGGCCGTCCTCCCCGCCACGGCCGTCTTCGGCGCCGCCGCCGCAGCCTTCATCTACGTGCCC
TCCTCGACGACGACCGGCGATGACGCCCAGGCGCTCGATCCCGTCACGGCCTCGCTGGGCGAGACGCTGCGCTGG
AATCTCTGGGGGTATTCTTCCAGGACCAAGCTTGTCGTCAGGAGGACTTGCCTGGTCATGCTCCTCGTCGCCGGG
AACACCTACCTTTCCTGCACGAGGGGGTTGTACGGCGTCGAGGCCCACGGGGCGCTCGTCTATGCGGCTGTCTGG
GTTGGCGCCGCGGCTTGTACGGGGTTGGCTCTCGGGTTGGTGGGCGGTGTCTAG
Gene >Ophcf2|04471
ATGGCGCCAACGACGCGGAGCAGCTCTACGGGATCACTGGAGCGGGTACCCGAAGACGCGACAGTCGCTGCGAGG
GACGAGAGCAGGGGGCGGACGATGGCAGCGAAGCGGGGAGCGCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GGCGTGGTATCGTGCGGGAAGTTCGCGTTCCCTTTGCTGGTGGTTGCGAGTTTCTGCCTGGCGAGTTGGGGGTAT
AGTCTTGTGGGGGAGGTTAGCGGTGGGAGGTTGGCGGCTGTGAGTCGGAGTCAGGAGTCTGGGGGGGAGATTGCC
GTCTTGGTAGGGTGGAGGATGTGAGTTTCTGTTTTCTTTTTTTCCCTTTTTTTTTTTTCTTGCCTTGTCTTCTTG
TTGTTTTTCTCATCTTGTTGTTGAGTTGTTGACGATGTCGAGTCGTGTTGCTGACGGCTGGTAGGTTGGAGCTCG
GGCTTGCTTGGTTTGGCGGCTTGCGTGCTTTGGATGTTGCCATGTTGGATCTTCTTGCTCATGGGCCTTTGGTGA
GTTGCTTCCTCGTCGGCTTGGTTCGACTCTTCGGCTGACGAGAGTACCGTCAGTTCTATCTCCAGGCCACCTTTT
ACTCCCTCGGCGTCAAGACAGCAGCCTCAGCACTCCTAGTCGACGTCCTCTCCGCCTCCCTCCCCTTCCATCTCC
TCCGTCCACCAACCAACCACCACCACTCCTCCCCCCCGGACCTCCAACTCCACCTCTACACAACCGCCCTCGCAT
CCAGCATCTACACCATAACCATCGCCCTCTCCCAACGACTCCTCCTCCCCCGCATCCTAGCCCTCCACTTCCGAG
GCCTAGCAACTCTCGAGCCCGCCTACGCAGCCTCCTACACGGCCGTCCTCCCCGCCACGGCCGTCTTCGGCGCCG
CCGCCGCAGCCTTCATCTACGTGCCCTCCTCGACGACGACCGGCGATGACGCCCAGGCGCTCGATCCCGTCACGG
CCTCGCTGGGCGAGACGCTGCGCTGGAATCTCTGGGGGTATTCTTCCAGGACCAAGCTTGTCGTCAGGAGGACTT
GCCTGGTCATGCTCCTCGTCGCCGGGAACACCTACCTTTCCTGCACGAGGGGGTTGTACGGCGTCGAGGCCCACG
GGGCGCTCGTCTATGCGGCTGTCTGGGTTGGCGCCGCGGCTTGTACGGGGTTGGCTCTCGGGTTGGTGGGCGGTG
TCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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