Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04466
Gene name
Locationscaffold_04:3322286..3323033
Strand-
Gene length (bp)747
Transcript length (bp)567
Coding sequence length (bp)567
Protein length (aa) 189

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13664 DUF4149 Domain of unknown function (DUF4149) 7.8E-24 15 124

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 53 75 22
3 95 117 22
4 154 176 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04466
MADSIIFSVAPYHIVSYGTLLGASVFHSFINGPVMYKSIDRPSFSAAQQNLFPIYFGLQTALPVALALTFPGSTL
AGVSSSVGGLLDVSSRWDSLLPIATMFVTGVVNLTVLLPATVKTMKERRGQCKRDGKEWDAPGPHSDKMKELNKR
FGMLHGISSLINLVTVLSAVGYGFTLGGRMQSLADRVG*
Coding >Ophcf2|04466
ATGGCAGATTCCATCATCTTCTCAGTGGCTCCGTACCACATCGTGTCCTACGGGACTCTGCTAGGCGCCTCCGTC
TTTCACTCCTTCATAAACGGCCCCGTCATGTACAAGTCCATCGACAGGCCTTCCTTCTCCGCCGCGCAGCAGAAC
CTCTTCCCCATCTACTTCGGCCTGCAGACGGCTCTTCCGGTGGCACTGGCCCTCACGTTCCCCGGGAGCACGCTG
GCGGGGGTTTCGAGTAGTGTGGGCGGGCTTCTGGATGTGTCGTCACGGTGGGACTCGCTGCTGCCGATAGCGACC
ATGTTTGTCACGGGCGTTGTCAACCTGACCGTTCTACTTCCGGCGACTGTGAAGACGATGAAGGAGCGGCGAGGC
CAATGCAAGAGGGACGGCAAGGAGTGGGATGCGCCGGGGCCGCATTCGGACAAGATGAAGGAGCTGAACAAGAGG
TTCGGCATGTTGCATGGCATCTCTTCGCTTATCAATCTTGTGACTGTGCTGTCGGCGGTGGGTTATGGGTTTACG
CTCGGGGGGCGGATGCAGTCCCTTGCGGATAGGGTCGGCTGA
Transcript >Ophcf2|04466
ATGGCAGATTCCATCATCTTCTCAGTGGCTCCGTACCACATCGTGTCCTACGGGACTCTGCTAGGCGCCTCCGTC
TTTCACTCCTTCATAAACGGCCCCGTCATGTACAAGTCCATCGACAGGCCTTCCTTCTCCGCCGCGCAGCAGAAC
CTCTTCCCCATCTACTTCGGCCTGCAGACGGCTCTTCCGGTGGCACTGGCCCTCACGTTCCCCGGGAGCACGCTG
GCGGGGGTTTCGAGTAGTGTGGGCGGGCTTCTGGATGTGTCGTCACGGTGGGACTCGCTGCTGCCGATAGCGACC
ATGTTTGTCACGGGCGTTGTCAACCTGACCGTTCTACTTCCGGCGACTGTGAAGACGATGAAGGAGCGGCGAGGC
CAATGCAAGAGGGACGGCAAGGAGTGGGATGCGCCGGGGCCGCATTCGGACAAGATGAAGGAGCTGAACAAGAGG
TTCGGCATGTTGCATGGCATCTCTTCGCTTATCAATCTTGTGACTGTGCTGTCGGCGGTGGGTTATGGGTTTACG
CTCGGGGGGCGGATGCAGTCCCTTGCGGATAGGGTCGGCTGA
Gene >Ophcf2|04466
ATGGCAGATTCCATCATCTTCTCAGTGGCTCCGTACCACATCGTGTCGTACGTCTCCGACAGCCAACTATTTGGC
TTGAGCGTGGCTGACATGCGTGCCTCAGCTACGGGACTCTGCTAGGCGCCTCCGTCTTTCACGTACGTCTCCTGA
TGATGAGATGAGATGCTCAGACCGGCTGACGAGAAGCATCAGTCCTTCATAAACGGCCCCGTCATGTACAAGTCC
ATCGACAGGCCTTCCTTCTCCGCCGCGCAGCAGAACCTCTTCCCCATCTACTTCGGCCTGCAGACGGCTCTTCCG
GTGGCACTGGCCCTCACGTTCCCCGGGAGCACGCTGGCGGGGGTTTCGAGTAGTGTGGGCGGGCTTCTGGATGTG
TCGTCACGGTGGGACTCGCTGCTGCCGATAGCGACCATGTTTGTCACGGGCGTTGTCAACCTGACCGTTCTACTT
CCGGCGACTGTGAAGACGATGAAGGAGCGGCGAGGCCAATGTATGTTCTCTATCCACGGAGGATACGTTTGTCTG
TCCCTTTGGTGCTACGTGGCTGACTTGGTGGTAGGCAAGAGGGACGGCAAGGAGTGGGATGCGCCGGGGCCGCAT
TCGGACAAGATGAAGGAGCTGAACAAGAGGTTCGGCATGTTGCATGGCATCTCTTCGCTTATCAATCTTGTGACT
GTGCTGTCGGCGGTGGGTTATGGGTTTACGCTCGGGGGGCGGATGCAGTCCCTTGCGGATAGGGTCGGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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