Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04446
Gene name
Locationscaffold_04:3259292..3260439
Strand+
Gene length (bp)1147
Transcript length (bp)1032
Coding sequence length (bp)1032
Protein length (aa) 344

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 5.7E-32 37 241
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 2.3E-23 42 268
PF08659 KR KR domain 5.8E-12 37 210

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 4 26 22
2 296 318 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04446
METSIFTAAACATILLLCASAMGLFNRGDKMPVEGRTILLTGASEGMGLSVAQKLAARGANVILVSRNVVRLKEA
LTSLEAMAKNPDTQRFHYISADVSAPGYAQSVVTEAKRWNNGQTPDIVWCMAGVSVPELFIDMKMDSMRRQMDVN
FFGTADMAHAILRHWLSAEAPLEKHARHLIMTTSVVAFYTVPGYAPYAPSKWAIRGLADTISQEILMYPQNVEVH
VVYPGNILSPGYERENRTKPAVTKLLEESDPKQTPDEVAEAAIRGLQRGDYFVTINFLGSLMKWGMLGGSFRNNW
VVDTLGAWLVSIVWFFVQMDLHGKIKSYGKTHGHPSSYEKTSS*
Coding >Ophcf2|04446
ATGGAAACGTCCATATTCACAGCGGCCGCTTGCGCCACGATCCTCCTGCTCTGCGCCTCTGCCATGGGCCTCTTC
AACCGGGGCGACAAGATGCCCGTCGAGGGCAGGACAATTCTCCTTACGGGCGCCTCCGAAGGCATGGGCTTGTCC
GTAGCACAAAAGCTCGCCGCCCGAGGCGCAAACGTCATCCTCGTCTCCCGGAACGTCGTCAGGCTAAAAGAAGCT
CTCACAAGTCTCGAGGCCATGGCCAAGAACCCAGACACGCAACGCTTCCACTACATCTCGGCCGACGTCTCCGCC
CCCGGATACGCCCAGTCGGTAGTAACGGAGGCCAAACGATGGAACAACGGCCAAACGCCCGACATCGTCTGGTGC
ATGGCCGGCGTCTCAGTCCCCGAGCTCTTCATCGACATGAAGATGGACTCGATGCGCCGACAAATGGACGTCAAC
TTCTTCGGCACCGCTGACATGGCCCACGCCATTCTCCGTCACTGGCTATCCGCTGAAGCCCCCCTCGAGAAACAT
GCCAGACATCTCATCATGACCACCAGCGTCGTCGCCTTCTACACCGTCCCCGGCTACGCGCCCTACGCCCCTTCC
AAGTGGGCCATCCGCGGCCTCGCAGATACAATCTCCCAGGAGATTCTCATGTACCCGCAAAACGTCGAGGTTCAC
GTCGTCTACCCCGGAAACATCCTCTCGCCTGGCTACGAGCGTGAGAACCGCACTAAGCCGGCTGTCACCAAGCTG
CTCGAGGAGTCGGATCCCAAGCAGACGCCCGACGAGGTGGCCGAGGCTGCCATCCGTGGCTTGCAGAGGGGAGAC
TACTTCGTCACCATCAATTTCTTGGGAAGCTTGATGAAATGGGGTATGCTGGGTGGCTCGTTTCGCAACAACTGG
GTCGTCGATACTCTTGGTGCTTGGCTCGTGTCCATCGTCTGGTTCTTTGTTCAGATGGATCTTCATGGCAAGATC
AAATCTTATGGCAAGACACACGGCCATCCCAGTTCATACGAAAAGACTTCATCTTAA
Transcript >Ophcf2|04446
ATGGAAACGTCCATATTCACAGCGGCCGCTTGCGCCACGATCCTCCTGCTCTGCGCCTCTGCCATGGGCCTCTTC
AACCGGGGCGACAAGATGCCCGTCGAGGGCAGGACAATTCTCCTTACGGGCGCCTCCGAAGGCATGGGCTTGTCC
GTAGCACAAAAGCTCGCCGCCCGAGGCGCAAACGTCATCCTCGTCTCCCGGAACGTCGTCAGGCTAAAAGAAGCT
CTCACAAGTCTCGAGGCCATGGCCAAGAACCCAGACACGCAACGCTTCCACTACATCTCGGCCGACGTCTCCGCC
CCCGGATACGCCCAGTCGGTAGTAACGGAGGCCAAACGATGGAACAACGGCCAAACGCCCGACATCGTCTGGTGC
ATGGCCGGCGTCTCAGTCCCCGAGCTCTTCATCGACATGAAGATGGACTCGATGCGCCGACAAATGGACGTCAAC
TTCTTCGGCACCGCTGACATGGCCCACGCCATTCTCCGTCACTGGCTATCCGCTGAAGCCCCCCTCGAGAAACAT
GCCAGACATCTCATCATGACCACCAGCGTCGTCGCCTTCTACACCGTCCCCGGCTACGCGCCCTACGCCCCTTCC
AAGTGGGCCATCCGCGGCCTCGCAGATACAATCTCCCAGGAGATTCTCATGTACCCGCAAAACGTCGAGGTTCAC
GTCGTCTACCCCGGAAACATCCTCTCGCCTGGCTACGAGCGTGAGAACCGCACTAAGCCGGCTGTCACCAAGCTG
CTCGAGGAGTCGGATCCCAAGCAGACGCCCGACGAGGTGGCCGAGGCTGCCATCCGTGGCTTGCAGAGGGGAGAC
TACTTCGTCACCATCAATTTCTTGGGAAGCTTGATGAAATGGGGTATGCTGGGTGGCTCGTTTCGCAACAACTGG
GTCGTCGATACTCTTGGTGCTTGGCTCGTGTCCATCGTCTGGTTCTTTGTTCAGATGGATCTTCATGGCAAGATC
AAATCTTATGGCAAGACACACGGCCATCCCAGTTCATACGAAAAGACTTCATCTTAA
Gene >Ophcf2|04446
ATGGAAACGTCCATATTCACAGCGGCCGCTTGCGCCACGATCCTCCTGCTCTGCGCCTCTGCCATGGGCCTCTTC
AACCGGGGCGACAAGATGCCCGTCGAGGGCAGGGTCCGTCAACAAACACATCGTCTCACCGCACGCTTCTCTAAT
CACTTTTCCCGCAGACAATTCTCCTTACGGGCGCCTCCGAAGGCATGGGCTTGTCCGTAGCACAAAAGCTCGCCG
CCCGAGGCGCAAACGTCATCCTCGTCTCCCGGAACGTCGTCAGGCTAAAAGAAGCTCTCACAAGTCTCGAGGTTC
GTCCCCTCTTGCGTCCGGCAATCCTCCGGCTACCGGCTAACACGGAACTGTACAGGCCATGGCCAAGAACCCAGA
CACGCAACGCTTCCACTACATCTCGGCCGACGTCTCCGCCCCCGGATACGCCCAGTCGGTAGTAACGGAGGCCAA
ACGATGGAACAACGGCCAAACGCCCGACATCGTCTGGTGCATGGCCGGCGTCTCAGTCCCCGAGCTCTTCATCGA
CATGAAGATGGACTCGATGCGCCGACAAATGGACGTCAACTTCTTCGGCACCGCTGACATGGCCCACGCCATTCT
CCGTCACTGGCTATCCGCTGAAGCCCCCCTCGAGAAACATGCCAGACATCTCATCATGACCACCAGCGTCGTCGC
CTTCTACACCGTCCCCGGCTACGCGCCCTACGCCCCTTCCAAGTGGGCCATCCGCGGCCTCGCAGATACAATCTC
CCAGGAGATTCTCATGTACCCGCAAAACGTCGAGGTTCACGTCGTCTACCCCGGAAACATCCTCTCGCCTGGCTA
CGAGCGTGAGAACCGCACTAAGCCGGCTGTCACCAAGCTGCTCGAGGAGTCGGATCCCAAGCAGACGCCCGACGA
GGTGGCCGAGGCTGCCATCCGTGGCTTGCAGAGGGGAGACTACTTCGTCACCATCAATTTCTTGGGAAGCTTGAT
GAAATGGGGTATGCTGGGTGGCTCGTTTCGCAACAACTGGGTCGTCGATACTCTTGGTGCTTGGCTCGTGTCCAT
CGTCTGGTTCTTTGTTCAGATGGATCTTCATGGCAAGATCAAATCTTATGGCAAGACACACGGCCATCCCAGTTC
ATACGAAAAGACTTCATCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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