Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04432
Gene name
Locationscaffold_04:3232237..3234470
Strand-
Gene length (bp)2233
Transcript length (bp)1251
Coding sequence length (bp)1251
Protein length (aa) 417

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01988 VIT1 VIT family 1.1E-50 10 209

GO

GO Term Description Terminal node
GO:0030026 cellular manganese ion homeostasis Yes
GO:0005384 manganese ion transmembrane transporter activity Yes
GO:0006873 cellular ion homeostasis No
GO:0055082 cellular chemical homeostasis No
GO:0065008 regulation of biological quality No
GO:0009987 cellular process No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0046915 transition metal ion transmembrane transporter activity No
GO:0006875 cellular metal ion homeostasis No
GO:0046916 cellular transition metal ion homeostasis No
GO:0022857 transmembrane transporter activity No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0005215 transporter activity No
GO:0055076 transition metal ion homeostasis No
GO:0019725 cellular homeostasis No
GO:0008324 cation transmembrane transporter activity No
GO:0030003 cellular cation homeostasis No
GO:0003674 molecular_function No
GO:0098771 inorganic ion homeostasis No
GO:0048878 chemical homeostasis No
GO:0055071 manganese ion homeostasis No
GO:0042592 homeostatic process No
GO:0015075 ion transmembrane transporter activity No
GO:0055065 metal ion homeostasis No
GO:0065007 biological regulation No
GO:0046873 metal ion transmembrane transporter activity No
GO:0008150 biological_process No
GO:0055080 cation homeostasis No
GO:0050801 ion homeostasis No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 39 61 22
3 154 176 22
4 186 208 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04432
MTPTRPRFLSGFTLGFSDGLTVPFALTAGLGSLGRADTVVYAGLAEMCAGSISMGIGGYLSAVDDAPVSSNGLDG
ERGVMLMASDEQLDIMSRDADEDELLVRRYLEPLSLSDSTVNAIFEALRCSPNSLSRAARQLHPKHTFTSQPTPR
SSPILVGLSISLGYLTGGIVPLFPYFFAPTVGQGLGWSVGLCLVALMAFGFIKCWVMGAGYGNRDSNTEQPIEDA
AMPRMGLFRTAVGKKNNIAASMGQTRDPVERRLREARSEGRDLMAELGLQRAGNGNKDLNTEQPNGHAAMPRMGL
FKTAFGKRNNVAASKDNQTASPLSIPKKRETNHRAKRLEDNMKDELVLMATEVLIKECVLDKNDEFWNKLVGEDD
GSLDYILGKRRLQSEQEDGDGDDEGGEEEDGEDRPCKARRV*
Coding >Ophcf2|04432
ATGACCCCGACCCGTCCACGGTTCCTATCCGGCTTCACGCTTGGCTTCTCCGATGGACTGACGGTTCCCTTTGCT
CTGACGGCAGGTCTTGGCTCGCTGGGTAGAGCCGACACTGTTGTCTACGCGGGTCTCGCTGAGATGTGCGCTGGG
AGCATCAGCATGGGCATTGGCGGCTATCTTTCTGCTGTTGATGATGCCCCGGTCTCATCTAATGGTCTCGATGGG
GAACGGGGTGTTATGCTGATGGCGTCGGATGAGCAGCTGGATATTATGTCTCGTGATGCTGATGAGGATGAGCTC
CTGGTGCGTCGATACCTTGAGCCACTGTCCCTATCAGACTCGACAGTCAACGCCATCTTCGAAGCCCTGCGCTGC
TCACCAAATAGCCTCTCCCGAGCAGCGCGCCAGCTCCATCCCAAACACACCTTCACCTCCCAGCCCACTCCACGA
TCCAGCCCCATCCTCGTCGGCCTGTCCATCTCGCTGGGGTATCTCACCGGCGGCATCGTCCCTCTATTCCCCTAT
TTCTTCGCCCCGACCGTCGGACAGGGCCTCGGCTGGAGTGTCGGCTTGTGTCTGGTTGCGCTTATGGCCTTTGGC
TTCATCAAGTGCTGGGTGATGGGGGCTGGTTATGGCAACAGGGATTCGAACACCGAGCAGCCCATTGAAGACGCC
GCGATGCCTCGAATGGGCCTTTTTAGAACTGCCGTCGGCAAGAAGAACAACATTGCAGCTTCCATGGGCCAAACC
AGGGATCCTGTGGAGCGAAGGCTCAGGGAGGCCAGGAGTGAGGGAAGAGATTTGATGGCCGAGCTCGGTCTTCAG
AGAGCCGGCAATGGCAACAAAGACTTGAACACCGAGCAGCCGAATGGACACGCCGCAATGCCTCGGATGGGCCTT
TTCAAAACTGCTTTCGGTAAGCGGAACAACGTTGCAGCTTCCAAGGACAACCAGACCGCATCGCCGCTCAGCATC
CCGAAAAAACGGGAGACAAACCACCGGGCCAAGAGACTTGAAGACAACATGAAAGATGAACTTGTCTTGATGGCT
ACCGAGGTCTTGATCAAGGAATGCGTTCTCGACAAGAACGATGAGTTCTGGAATAAGCTTGTTGGGGAGGACGAC
GGCAGCTTGGACTACATCTTGGGCAAGAGACGTCTTCAATCCGAGCAGGAGGATGGTGATGGCGATGATGAAGGG
GGAGAGGAAGAGGATGGTGAGGATCGTCCTTGCAAGGCGAGACGTGTCTAG
Transcript >Ophcf2|04432
ATGACCCCGACCCGTCCACGGTTCCTATCCGGCTTCACGCTTGGCTTCTCCGATGGACTGACGGTTCCCTTTGCT
CTGACGGCAGGTCTTGGCTCGCTGGGTAGAGCCGACACTGTTGTCTACGCGGGTCTCGCTGAGATGTGCGCTGGG
AGCATCAGCATGGGCATTGGCGGCTATCTTTCTGCTGTTGATGATGCCCCGGTCTCATCTAATGGTCTCGATGGG
GAACGGGGTGTTATGCTGATGGCGTCGGATGAGCAGCTGGATATTATGTCTCGTGATGCTGATGAGGATGAGCTC
CTGGTGCGTCGATACCTTGAGCCACTGTCCCTATCAGACTCGACAGTCAACGCCATCTTCGAAGCCCTGCGCTGC
TCACCAAATAGCCTCTCCCGAGCAGCGCGCCAGCTCCATCCCAAACACACCTTCACCTCCCAGCCCACTCCACGA
TCCAGCCCCATCCTCGTCGGCCTGTCCATCTCGCTGGGGTATCTCACCGGCGGCATCGTCCCTCTATTCCCCTAT
TTCTTCGCCCCGACCGTCGGACAGGGCCTCGGCTGGAGTGTCGGCTTGTGTCTGGTTGCGCTTATGGCCTTTGGC
TTCATCAAGTGCTGGGTGATGGGGGCTGGTTATGGCAACAGGGATTCGAACACCGAGCAGCCCATTGAAGACGCC
GCGATGCCTCGAATGGGCCTTTTTAGAACTGCCGTCGGCAAGAAGAACAACATTGCAGCTTCCATGGGCCAAACC
AGGGATCCTGTGGAGCGAAGGCTCAGGGAGGCCAGGAGTGAGGGAAGAGATTTGATGGCCGAGCTCGGTCTTCAG
AGAGCCGGCAATGGCAACAAAGACTTGAACACCGAGCAGCCGAATGGACACGCCGCAATGCCTCGGATGGGCCTT
TTCAAAACTGCTTTCGGTAAGCGGAACAACGTTGCAGCTTCCAAGGACAACCAGACCGCATCGCCGCTCAGCATC
CCGAAAAAACGGGAGACAAACCACCGGGCCAAGAGACTTGAAGACAACATGAAAGATGAACTTGTCTTGATGGCT
ACCGAGGTCTTGATCAAGGAATGCGTTCTCGACAAGAACGATGAGTTCTGGAATAAGCTTGTTGGGGAGGACGAC
GGCAGCTTGGACTACATCTTGGGCAAGAGACGTCTTCAATCCGAGCAGGAGGATGGTGATGGCGATGATGAAGGG
GGAGAGGAAGAGGATGGTGAGGATCGTCCTTGCAAGGCGAGACGTGTCTAG
Gene >Ophcf2|04432
ATGACCCCGACCCGTCCACGGTTCCTATCCGGCTTCACGCTTGGCTTCTCCGATGGACTGACGGTTCCCTTTGCT
CTGACGGCAGGTCTTGGCTCGCTGGGTAGAGCCGACACTGTTGTCTACGCGGGTCTCGCTGAGATGTGCGCTGGG
AGCATCAGCATGGGCATTGGCGGCTATCTTTCTGCTGTTGATGATGCCCCGGTCTCATCTAATGGTCTCGATGGG
GAACGGGGTGTTATGCTGATGGCGTCGGATGAGCAGCTGGATATTATGTCTCGTGATGCTGATGAGGATGAGCTC
CTGGTGCGTCGATACCTTGAGCCACTGTCCCTATCAGACTCGACAGTCAACGCCATCTTCGAAGCCCTGCGCTGC
TCACCAAATAGCCTCTCCCGAGCAGCGCGCCAGCTCCATCCCAAACACACCTTCACCTCCCAGCCCACTCCACGA
TCCAGCCCCATCCTCGTCGGCCTGTCCATCTCGCTGGGGTATCTCACCGGCGGCATCGTCCCTCTATTCCCCTAT
TTCTTCGCCCCGACCGTCGGACAGGGCCTCGGCTGGAGTGTCGGCTTGTGTCTGGTTGCGCTTATGGCCTTTGGC
TTCATCAAGTGCTGGGTGATGGGGGGTGGGGCTTCGTGGAGGAGATGCTTGGTGCAGGGCTGCTGGATGCTTCTT
CTTGGTAGCTTGGCTGCTGTCACTGCTGTGATTTGTGTTCATGCTGTTGCTGGTGTCGGGCTCTGACCTGCCAAG
TGTTGTAGGTAGCCATGCCGCTGTGAGGATCCGATAAGCCCCTGAGCTTCGGAAAGATATAGGCCTGGCTGTACG
CCCGAAACAGTATGGATCAAGCTACAAACGCTCCCTATCTATCCATTCACCAGCCAGTGGGGGTGTGTGTGGCTG
TACAGGCATCTGTAGGCTCAGAAGACGACGATTTAAGTTAAATGTACGAAAGCAATATATCCATCTTCCAGTATC
ATATTATCTTCTTCATCGTTCTTCCCCGTTCTTCACACCGGTTCCCTACCAATGATAAAGCCTGTTGGCCAGCTT
AGCCAGCCCCCCCTTTAGAGGTGCCGCCTGAAAGAGCAGTGAGTAGGCCAACCAGCCTGCTACAGAGGAAACCCC
GGCCTTTCAGAGAGAGAAATTTCGAGACCCGCAGCTTATTTCAGTCCCTCGCCTAGGCTGTGAATTTCTGCAGGT
TTACACTTGACCAACAACTCTCGTTCGTCTCATCTCGCATCAAACAGAGACTTGTTTTTTTTCTACTACATTAAC
TAGGCACCCCCCCCCCCCCCATCTTCTTCATCTTGTTCTCAAGAGAACACAACCTTCATCACATTCTATCGCAGA
ACGCAGCCATCAAGAACAGCAAATTTGATTCTCCCACTCGGCTATTCCATCGCAAACGGATCCCATGTCTTCACC
TCCCGACGCCCCCAAAGAGGGAGAAAGTTCCCAAGCATCGACTGTGAGGCAGAATCTCTCGGATGCCTACTTTTC
CAGCTACATGGATCGGCTGGTTGAAACCATGGATCCTGTGGAGCGAAGGCTCAGGGAGGCCAGGAGTGAGGGAAG
GGACTTGATGGCCGAGCTCGGTCTTGCGAAAGCTGGTTATGGCAACAGGGATTCGAACACCGAGCAGCCCATTGA
AGACGCCGCGATGCCTCGAATGGGCCTTTTTAGAACTGCCGTCGGCAAGAAGAACAACATTGCAGCTTCCATGGG
CCAAACCAGGGATCCTGTGGAGCGAAGGCTCAGGGAGGCCAGGAGTGAGGGAAGAGATTTGATGGCCGAGCTCGG
TCTTCAGAGAGCCGGCAATGGCAACAAAGACTTGAACACCGAGCAGCCGAATGGACACGCCGCAATGCCTCGGAT
GGGCCTTTTCAAAACTGCTTTCGGTAAGCGGAACAACGTTGCAGCTTCCAAGGACAACCAGACCGCATCGCCGCT
CAGCATCCCGAAAAAACGGGAGACAAACCACCGGGCCAAGAGACTTGAAGACAACATGAAAGATGAACTTGTCTT
GATGGCTACCGAGGTCTTGATCAAGGAATGCGTTCTCGACAAGAACGATGAGTTCTGGAATAAGCTTGTTGGGGA
GGACGACGGCAGCTTGGACTACATCTTGGGCAAGAGACGTCTTCAATCCGAGCAGGAGGATGGTGATGGCGATGA
TGAAGGGGGAGAGGAAGAGGATGGTGAGGATCGTCCTTGCAAGGCGAGACGTGTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail