Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04347
Gene name
Locationscaffold_04:2996991..2998126
Strand-
Gene length (bp)1135
Transcript length (bp)1071
Coding sequence length (bp)1071
Protein length (aa) 357

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22
2 48 70 22
3 153 175 22
4 182 199 17
5 228 245 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04347
MAFSWDSMFSIALFLGPLAFAKGFSYYRNSKTPPSPSKPAIRPVPTRIWPAIALLLAAAALYVAQTTPAFEPENI
FVRTQSRLLTPVDVLFTRLAALRPGQMLTTRDEALRARLVNLESRLLYFQYGPEALGDCPFCNSDEPDYYFFYTV
VDLLRPHFVNFVLMVLVTSSIWTDVHGSQWRTLSALAAACLAAIDIFIVKTYDHQSNSASIRLEDIDFFFWSMRC
YRLVALAALDTILAVLIYLSCTNRAFITLPSAPERIEALTRSLMSVKSKMSAMGIVRNTALRDSDLRSRSQAYWA
HEVRLMSEVMEERDVVEGINNALSSRIDMQAVLKDADAYTQAVLQPLQSLTPDDAT*
Coding >Ophcf2|04347
ATGGCATTCTCATGGGACTCAATGTTCTCTATAGCCCTCTTCCTCGGCCCCTTGGCCTTCGCAAAGGGCTTCAGC
TATTACCGCAACTCGAAAACACCGCCCTCCCCATCCAAACCAGCCATCCGTCCCGTCCCAACCCGAATCTGGCCC
GCCATCGCCCTCCTCCTCGCCGCAGCAGCGCTGTACGTAGCGCAGACAACACCCGCGTTCGAACCTGAGAACATC
TTCGTCCGCACGCAGAGCAGGCTCCTTACGCCCGTCGACGTGCTCTTCACGCGTCTGGCTGCGCTACGTCCGGGA
CAGATGCTGACGACTCGTGATGAGGCTCTTCGCGCCAGGCTCGTCAATCTCGAGAGTAGGCTTCTTTACTTTCAG
TATGGGCCTGAAGCTCTCGGCGACTGTCCTTTTTGCAACTCGGATGAGCCAGATTATTACTTCTTCTACACTGTC
GTTGACCTCTTGCGTCCGCATTTCGTCAACTTCGTTCTCATGGTTCTCGTCACCTCCTCCATCTGGACAGACGTC
CATGGCTCGCAGTGGCGAACCCTCTCCGCCCTGGCAGCCGCCTGTCTCGCCGCGATAGACATCTTCATCGTAAAA
ACATACGATCATCAATCCAACTCAGCCTCGATCCGCCTCGAAGACATCGACTTCTTCTTCTGGTCCATGCGCTGC
TACCGCCTCGTCGCCCTCGCCGCCCTCGACACCATCCTCGCCGTCCTCATCTACTTATCCTGCACGAACCGGGCC
TTCATAACGCTGCCTTCTGCTCCGGAACGCATCGAGGCTCTTACCCGTAGCCTCATGTCCGTCAAGAGCAAGATG
AGCGCCATGGGCATCGTGCGGAATACGGCTCTTCGGGATTCGGACCTGAGGTCGCGCAGTCAGGCTTACTGGGCT
CATGAGGTCCGTCTTATGAGCGAGGTTATGGAGGAGAGGGACGTTGTCGAGGGTATCAACAATGCCCTGAGCAGC
CGCATTGATATGCAGGCTGTCCTCAAGGATGCCGACGCCTATACCCAGGCTGTTTTGCAGCCTCTGCAGAGCCTG
ACGCCTGATGATGCGACGTAA
Transcript >Ophcf2|04347
ATGGCATTCTCATGGGACTCAATGTTCTCTATAGCCCTCTTCCTCGGCCCCTTGGCCTTCGCAAAGGGCTTCAGC
TATTACCGCAACTCGAAAACACCGCCCTCCCCATCCAAACCAGCCATCCGTCCCGTCCCAACCCGAATCTGGCCC
GCCATCGCCCTCCTCCTCGCCGCAGCAGCGCTGTACGTAGCGCAGACAACACCCGCGTTCGAACCTGAGAACATC
TTCGTCCGCACGCAGAGCAGGCTCCTTACGCCCGTCGACGTGCTCTTCACGCGTCTGGCTGCGCTACGTCCGGGA
CAGATGCTGACGACTCGTGATGAGGCTCTTCGCGCCAGGCTCGTCAATCTCGAGAGTAGGCTTCTTTACTTTCAG
TATGGGCCTGAAGCTCTCGGCGACTGTCCTTTTTGCAACTCGGATGAGCCAGATTATTACTTCTTCTACACTGTC
GTTGACCTCTTGCGTCCGCATTTCGTCAACTTCGTTCTCATGGTTCTCGTCACCTCCTCCATCTGGACAGACGTC
CATGGCTCGCAGTGGCGAACCCTCTCCGCCCTGGCAGCCGCCTGTCTCGCCGCGATAGACATCTTCATCGTAAAA
ACATACGATCATCAATCCAACTCAGCCTCGATCCGCCTCGAAGACATCGACTTCTTCTTCTGGTCCATGCGCTGC
TACCGCCTCGTCGCCCTCGCCGCCCTCGACACCATCCTCGCCGTCCTCATCTACTTATCCTGCACGAACCGGGCC
TTCATAACGCTGCCTTCTGCTCCGGAACGCATCGAGGCTCTTACCCGTAGCCTCATGTCCGTCAAGAGCAAGATG
AGCGCCATGGGCATCGTGCGGAATACGGCTCTTCGGGATTCGGACCTGAGGTCGCGCAGTCAGGCTTACTGGGCT
CATGAGGTCCGTCTTATGAGCGAGGTTATGGAGGAGAGGGACGTTGTCGAGGGTATCAACAATGCCCTGAGCAGC
CGCATTGATATGCAGGCTGTCCTCAAGGATGCCGACGCCTATACCCAGGCTGTTTTGCAGCCTCTGCAGAGCCTG
ACGCCTGATGATGCGACGTAA
Gene >Ophcf2|04347
ATGGCATTCTCATGGGACTCGTAAGCAGTCAGCCTCCCTCACGCTCACCACAGCTAACTCTTTTCCTTCCCCCCC
CCCACCTAGAATGTTCTCTATAGCCCTCTTCCTCGGCCCCTTGGCCTTCGCAAAGGGCTTCAGCTATTACCGCAA
CTCGAAAACACCGCCCTCCCCATCCAAACCAGCCATCCGTCCCGTCCCAACCCGAATCTGGCCCGCCATCGCCCT
CCTCCTCGCCGCAGCAGCGCTGTACGTAGCGCAGACAACACCCGCGTTCGAACCTGAGAACATCTTCGTCCGCAC
GCAGAGCAGGCTCCTTACGCCCGTCGACGTGCTCTTCACGCGTCTGGCTGCGCTACGTCCGGGACAGATGCTGAC
GACTCGTGATGAGGCTCTTCGCGCCAGGCTCGTCAATCTCGAGAGTAGGCTTCTTTACTTTCAGTATGGGCCTGA
AGCTCTCGGCGACTGTCCTTTTTGCAACTCGGATGAGCCAGATTATTACTTCTTCTACACTGTCGTTGACCTCTT
GCGTCCGCATTTCGTCAACTTCGTTCTCATGGTTCTCGTCACCTCCTCCATCTGGACAGACGTCCATGGCTCGCA
GTGGCGAACCCTCTCCGCCCTGGCAGCCGCCTGTCTCGCCGCGATAGACATCTTCATCGTAAAAACATACGATCA
TCAATCCAACTCAGCCTCGATCCGCCTCGAAGACATCGACTTCTTCTTCTGGTCCATGCGCTGCTACCGCCTCGT
CGCCCTCGCCGCCCTCGACACCATCCTCGCCGTCCTCATCTACTTATCCTGCACGAACCGGGCCTTCATAACGCT
GCCTTCTGCTCCGGAACGCATCGAGGCTCTTACCCGTAGCCTCATGTCCGTCAAGAGCAAGATGAGCGCCATGGG
CATCGTGCGGAATACGGCTCTTCGGGATTCGGACCTGAGGTCGCGCAGTCAGGCTTACTGGGCTCATGAGGTCCG
TCTTATGAGCGAGGTTATGGAGGAGAGGGACGTTGTCGAGGGTATCAACAATGCCCTGAGCAGCCGCATTGATAT
GCAGGCTGTCCTCAAGGATGCCGACGCCTATACCCAGGCTGTTTTGCAGCCTCTGCAGAGCCTGACGCCTGATGA
TGCGACGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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