Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04260
Gene name
Locationscaffold_04:1903030..1903968
Strand+
Gene length (bp)938
Transcript length (bp)429
Coding sequence length (bp)429
Protein length (aa) 143

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 20 39 19
2 75 97 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04260
MSPYTFRPTSLTEAPLTEAQAYYLLLGYCVVYVLPLHVLSRARLLPSRSRDDPSVIHSRALGKTPTMRLRPPAKA
SLLTALLFAGPIFECLLVDGLWRQWLRLAPLKRLCHDWPTWRNIVAGPVTEETLFRSAATPLLILAE*
Coding >Ophcf2|04260
ATGTCGCCATATACCTTTCGGCCCACGTCTCTAACTGAGGCACCTCTAACCGAGGCACAAGCTTACTACCTACTA
TTAGGATATTGCGTCGTCTACGTCTTGCCACTTCACGTTCTTTCTCGCGCTAGGCTTCTACCATCACGATCAAGA
GACGACCCTAGCGTCATTCATTCTCGAGCTCTCGGCAAGACTCCCACTATGCGTCTTCGTCCGCCAGCAAAAGCC
TCGCTCCTCACTGCTCTCTTGTTCGCTGGCCCCATCTTCGAGTGCCTGCTTGTCGATGGCCTGTGGAGGCAGTGG
CTACGACTTGCACCCTTGAAGCGTCTCTGCCATGACTGGCCAACTTGGCGAAACATTGTAGCTGGCCCTGTTACT
GAGGAAACCCTTTTCCGCTCGGCCGCTACCCCTTTACTAATCCTTGCAGAGTAG
Transcript >Ophcf2|04260
ATGTCGCCATATACCTTTCGGCCCACGTCTCTAACTGAGGCACCTCTAACCGAGGCACAAGCTTACTACCTACTA
TTAGGATATTGCGTCGTCTACGTCTTGCCACTTCACGTTCTTTCTCGCGCTAGGCTTCTACCATCACGATCAAGA
GACGACCCTAGCGTCATTCATTCTCGAGCTCTCGGCAAGACTCCCACTATGCGTCTTCGTCCGCCAGCAAAAGCC
TCGCTCCTCACTGCTCTCTTGTTCGCTGGCCCCATCTTCGAGTGCCTGCTTGTCGATGGCCTGTGGAGGCAGTGG
CTACGACTTGCACCCTTGAAGCGTCTCTGCCATGACTGGCCAACTTGGCGAAACATTGTAGCTGGCCCTGTTACT
GAGGAAACCCTTTTCCGCTCGGCCGCTACCCCTTTACTAATCCTTGCAGAGTAG
Gene >Ophcf2|04260
ATGTCGCCATATACCTTTCGGCCCACGTCTCTAACTGAGGCACCTCTAACCGAGGCACAAGCTTACTACCTACTA
GTAAGTGGCGTGGTTCCTTAACTTTAGCATGCAAATGTAACGTGCAATGATTAGCGAACTTAAGGTTCATGCTTT
TACTAGGTAGCTACATCGCTTGCCTCTTCACAGTTGCCCTCTCTTTCAGAAACGATACCATTGTCGTGTTACATC
TACCTCGAGAACGAACAAGTCAGCGCTTCATGATAGGCTAATTGCTAATGCTAAATAAAGTTAGGATATTGCGTC
GTCTACGTCTTGCCACTTCACGTTCTTTCTCGCGCTAGGCTTCTACCATCACGATCAAGAGACGACCCTAGCGTC
ATTCATTCTCGAGTTCGTTCAGTTTATGTGTCTACGACGGCCTGTTCTTTAAGCACCTTGTTTATTATCGTTCGC
TCAAGCGAGGCTACAGGCTCTCGGCAAGACTCCCACTATGCGTCTTCGTCCGCCAGGTTTGAATCAGCTTTTCAT
CTCATGGGATACTGGCCACTCGGGCTGCTTGAGACAGCAAAAGCCTCGCTCCTCACTGCTCTCTTGTTCGCTGGC
CCCATCTTCGAGTGCCTGCTTGTCGATGGCCTGTGGAGGCAGTGGCTACGACTTGCACCCTTGAAGCGTCTCTGC
CATGACTGGCCAACTTGGCGAAACATTGTAGCTGTGAGTCCCCTTTGCTACTATTGCTGGCTGCACTCACGACTT
GCCTGTTTGTCCGCCCTGATCCTGATTGTTACCTCCCAGGGCCCTGTTACTGAGGAAACCCTTTTCCGCTCGGCC
GCTACCCCTTTACTAATCCTTGCAGGTGCTAATCTGTCAAGCATCATCTTCTGGTCCCCGTTGGTTTTTGGCCTC
GCCCATGTGCACCATTTCTACGAATTTCGGAAGAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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