Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04258
Gene name
Locationscaffold_04:1792942..1795177
Strand-
Gene length (bp)2235
Transcript length (bp)1002
Coding sequence length (bp)1002
Protein length (aa) 334

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00153 Mito_carr Mitochondrial carrier protein 6.6E-09 9 78
PF00153 Mito_carr Mitochondrial carrier protein 7.1E-14 99 186
PF00153 Mito_carr Mitochondrial carrier protein 1.6E-15 191 279

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.5

Transmembrane Domains

Domain # Start End Length
1 15 32 17
2 65 87 22
3 102 124 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04258
MSVQSKPEPSPWSRATAGAAGAVLANLLAYPLDIVKTRLQVQVGQGDANSVADNEVHYTSTWNAISRIVASTNFA
YFYWYTVVRSLYLNSCPARRSSPPMSVELALGAVAGALAQLFTIPVAVVTTRQQTASRHERKSLLDTAHEVVEGP
DGILGLWRGLKASLILVVNPAITYGAYERLRTVFFHGKPNLSPWEAFLLGAFSKAIATVVTQPLIVAKVSLQSKP
PPARKGRPFRNFVEVLTFVAEREGLLALFKGIGPQIAKGLLVQGILMMTKERVEIYVLQLLSKFYATQKVCGRSL
AVEGKNSRLPNLIILFADGAKLRQHRLVEVVEE*
Coding >Ophcf2|04258
ATGAGCGTACAGTCTAAGCCAGAGCCATCTCCTTGGAGTCGCGCTACTGCCGGCGCTGCCGGTGCTGTGTTAGCA
AATCTGCTGGCGTATCCCCTGGACATTGTGAAAACGCGCCTTCAAGTCCAGGTTGGTCAAGGTGATGCCAACTCG
GTCGCGGATAATGAGGTCCATTACACTTCAACTTGGAACGCCATCTCGCGCATAGTTGCGTCCACAAATTTCGCC
TACTTTTACTGGTATACGGTGGTAAGGAGTCTGTACCTCAACTCATGCCCTGCGCGGCGTTCCTCGCCCCCAATG
AGCGTGGAACTTGCGCTCGGCGCCGTCGCAGGCGCTTTAGCACAACTTTTTACCATACCGGTGGCTGTTGTCACG
ACTCGGCAACAAACTGCAAGCCGACACGAGCGCAAAAGCCTCTTAGACACTGCTCATGAAGTAGTCGAGGGACCC
GACGGTATCTTGGGCCTCTGGAGAGGTCTCAAAGCAAGTCTCATTCTGGTTGTGAATCCTGCCATTACCTATGGC
GCATACGAGCGTCTGCGGACTGTCTTCTTCCATGGCAAACCTAATCTAAGTCCATGGGAAGCGTTCTTGCTTGGC
GCCTTTTCAAAGGCTATTGCTACGGTGGTCACACAGCCACTCATTGTAGCTAAAGTCTCGTTACAATCTAAGCCA
CCACCAGCCAGGAAAGGGAGGCCATTCCGAAATTTCGTCGAAGTATTGACCTTCGTTGCCGAGCGCGAAGGCCTT
TTGGCCCTATTCAAGGGGATCGGTCCCCAAATCGCTAAGGGCTTGTTGGTTCAGGGCATCCTTATGATGACGAAA
GAAAGAGTCGAAATTTATGTCCTGCAACTTTTGAGCAAGTTCTACGCAACTCAAAAAGTATGCGGTCGAAGCTTG
GCTGTCGAGGGCAAGAACAGTCGACTGCCAAATCTGATCATACTGTTCGCGGATGGTGCGAAGCTCAGACAGCAC
CGTCTGGTTGAGGTCGTCGAGGAATGA
Transcript >Ophcf2|04258
ATGAGCGTACAGTCTAAGCCAGAGCCATCTCCTTGGAGTCGCGCTACTGCCGGCGCTGCCGGTGCTGTGTTAGCA
AATCTGCTGGCGTATCCCCTGGACATTGTGAAAACGCGCCTTCAAGTCCAGGTTGGTCAAGGTGATGCCAACTCG
GTCGCGGATAATGAGGTCCATTACACTTCAACTTGGAACGCCATCTCGCGCATAGTTGCGTCCACAAATTTCGCC
TACTTTTACTGGTATACGGTGGTAAGGAGTCTGTACCTCAACTCATGCCCTGCGCGGCGTTCCTCGCCCCCAATG
AGCGTGGAACTTGCGCTCGGCGCCGTCGCAGGCGCTTTAGCACAACTTTTTACCATACCGGTGGCTGTTGTCACG
ACTCGGCAACAAACTGCAAGCCGACACGAGCGCAAAAGCCTCTTAGACACTGCTCATGAAGTAGTCGAGGGACCC
GACGGTATCTTGGGCCTCTGGAGAGGTCTCAAAGCAAGTCTCATTCTGGTTGTGAATCCTGCCATTACCTATGGC
GCATACGAGCGTCTGCGGACTGTCTTCTTCCATGGCAAACCTAATCTAAGTCCATGGGAAGCGTTCTTGCTTGGC
GCCTTTTCAAAGGCTATTGCTACGGTGGTCACACAGCCACTCATTGTAGCTAAAGTCTCGTTACAATCTAAGCCA
CCACCAGCCAGGAAAGGGAGGCCATTCCGAAATTTCGTCGAAGTATTGACCTTCGTTGCCGAGCGCGAAGGCCTT
TTGGCCCTATTCAAGGGGATCGGTCCCCAAATCGCTAAGGGCTTGTTGGTTCAGGGCATCCTTATGATGACGAAA
GAAAGAGTCGAAATTTATGTCCTGCAACTTTTGAGCAAGTTCTACGCAACTCAAAAAGTATGCGGTCGAAGCTTG
GCTGTCGAGGGCAAGAACAGTCGACTGCCAAATCTGATCATACTGTTCGCGGATGGTGCGAAGCTCAGACAGCAC
CGTCTGGTTGAGGTCGTCGAGGAATGA
Gene >Ophcf2|04258
ATGAGCGTACAGTCTAAGCCAGAGCCATCTCCTTGGAGTCGCGCTACTGCCGGCGCTGCCGGTGCTGTGTTAGCA
AATCTGCTGGCGTATCCCCTGGACATGTGTGTAAGGCCTCGTCCTCCGATTTTCCCCTCTTACTGCTAAATCAGA
TCACGACCTGTAAGTGTGAAAACGCGCCTTCAAGTCCAGGTTGGTCAAGGTGATGCCAACTCGGTCGCGGATAAT
GAGGTCCATTACACTTCAACTTGGAACGCCATCTCGCGCATAGTTGGTGAGGACGGCATTAGGGGCTTATATGCC
GGTATGAATGGGTCTCTGGTTGGGGTAGCGTCCACAAATTTCGCCTACTTTTACTGGTATACGGTGGTAAGGAGT
CTGTACCTCAACTCATGCCCTGCGCGGCGTTCCTCGCCCCCAATGAGCGTGGAACTTGCGCTCGGCGCCGTCGCA
GGCGCTTTAGCACAACTTTTTACCATACCGGTGGCTGTTGTCACGACTCGGCAACAAACTGCAAGCCGACACGAG
CGCAAAAGCCTCTTAGACACTGCTCATGAAGTAGTCGAGGGACCCGACGGTATCTTGGGCCTCTGGAGAGGTCTC
AAAGCAAGTCTCATTCTGGTTGTGAATCCTGCCATTACCTATGGCGCATACGAGCGTCTGCGGACTGTCTTCTTC
CATGGCAAACCTAATCTAAGTCCATGGGAAGCGTTCTGTAAGTCGACCCTTGCACCATCACAGACATATGTCTTT
TAGCTGTCCATGCGCCAAGCTGTGTCTGATGATGAGCTCCAGTGCTTGGCGCCTTTTCAAAGGCTATTGCTACGG
TGGTCACACAGCCACTCATTGTAGCTAAAGTCTCGTTACAATCTAAGCCACCACCAGCCAGGAAAGGGAGGCCAT
TCCGAAATTTCGTCGAAGTATTGACCTTCGTTGCCGAGCGCGAAGGCCTTTTGGCCCTATTCAAGGGGATCGGTC
CCCAAATCGCTAAGGGCTTGTTGGTTCAGGGCATCCTTATGATGACGAAAGAAAGGTTAGTGCAGCACGGTTTTT
TGTGACTCTGATCTACCTGCGATTTTAACGCAGCGCTTGTTGACAAACGACAGAGTCGAAATTTATGTCCTGCAA
CTTTTGAGCAAGTTCTACGCAACTCAAAAAGTATGCGGTCGAAGGTTGAGCAATATTGCCTCGTTGGTAATTATA
TATTGTCGTCTTTACTTCCGCGATCGTAAGACTTATTCTCTCTGACGCCACCGATATACTGCACACATTTATGTT
TCATGGAGCTCATATTAGAGATACTCTATTGATATGGACTACTTCTCAACCGTCTGGGATTTCGGTGAACAGAAA
ATGTTTCTTCATTGCAGCATCAACATTGCCTGCCAACAGGCTGCAGCGAGAATTATTCAGGGAGAGTTTCCTGCT
CCTCCAGCCGCTCTGGCCTGCCGAGAACCCGCCAGGAGTTTGCCACCTAGGTTAAATTTGACTAAGTCAGTATAA
TCTGTCTGGGTTAGGAAAACTCGGCCTAGTAGCGGCTCATGGAGGAAGGGCACGATGAAGCCGGTCTGGTTCGTA
CTATTGAGACAAGGCAGGGTGTTCCGGTAGAGAAGGAAGTGGCTTGCGAGAATTTGTAGCCTGTGACAAGCACAG
CGAGGAATGCAGAAGCCTCTTATCATCCTCGTGCTGCGGGTCGTAACTGTGATTGCACTCAGTAGTGGTTCCGGA
TGCAACTGGTAACCCCTCTTTGAACGGTAGAGACAGATGACGATAGTCGGAGTTGAGAGGATCATTGGACATAGA
GCCACTCGGAATCAGGCCGGTGATATTCTCCGGGGGTTGCATAGGAGTATGCCGGAGTGTAGGACGGTTTGGATG
TCGGTTGCGCGGGGGCCCATCATGACACTGCTGCTCAGAGTTGCCAAATCTGTCATTCAGGGCACTCGAGGTGCT
CTGACCCGAGAGTGATATGAGCGGCGATATAGACACCCCTCTGGAGAAGATGACGAGAAAAAGGCATGAGAGCAG
GATGACAGCTTGAAGAATGGCCATTCTCTTCTGGAAGACAACTTCTTCGGCCAATAAGTTGAGTCTGGTGCTAAG
GGCCATGATGTCCCGCTCTGAACGATCAGCTTGGCTGTCGAGGGCAAGAACAGTCGACTGCCAAATCTGATCATA
CTGTTCGCGGATGGTGCGAAGCTCAGACAGCACCGTCTGGTTGAGGTCGTCGAGGAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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