Protein ID | Ophcf2|04223 |
Gene name | |
Location | scaffold_04:1206916..1208453 |
Strand | - |
Gene length (bp) | 1537 |
Transcript length (bp) | 1431 |
Coding sequence length (bp) | 1431 |
Protein length (aa) | 477 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07859 | Abhydrolase_3 | alpha/beta hydrolase fold | 1.3E-38 | 193 | 413 |
PF20434 | BD-FAE | BD-FAE | 2.3E-17 | 177 | 277 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016787 | hydrolase activity | Yes |
GO:0003674 | molecular_function | No |
GO:0003824 | catalytic activity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Peroxisome | Peroxisomal targeting signal | 0.4122 | 0.1897 | 0.2223 | 0.1167 | 0.5559 | 0.5314 | 0.289 | 0.1771 | 0.2753 | 0.6598 |
Orthofinder run ID | 4 |
Orthogroup | 616 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|04223 MPPFLLPATSLCSFSVSRDLGHWRQRSPERSSAQLSSLTDGVLHDRATVAGFPGCLLGPVAPPRSPTPRAAWRLT SVSVATGIASNVALGVVTPGLSPLAESPLAESESPPPPDYVNPLEASSRWYLSARASAVRYAASLGFSLSNRSDS TAPAPTRDLWLDSTLSRWSGRRKIKVDVWVPTRMSAGPRPAVIDLHGGGWILGQGTDDARWAGAVMETLDAVVFS VNYRLAPSYPFPIPIEDCVDAVLQIANRADELGIDRNSLFLSGFSAGATNALTSWLIIQDPSRWGYDLPSVPPTV AGLILFYPTLDITISRPEKRQMCARPELTLSPSLSDLIDASYVYPPIPRDQRTDFRLSPGLMSDELLQKLPPLHL CLCEYDMLLAEGFRFAQRLQYHNKHFSMRVVKGEAHGWDKPPPLVPKESVGIEYGEATRAVARWLGRDCETDNQS IGSKSHRVMRLLKRPSYLSFRSRSVR* |
Coding | >Ophcf2|04223 ATGCCCCCCTTTTTGCTCCCAGCCACCTCCCTTTGCTCCTTCTCCGTGTCTCGTGACCTCGGTCATTGGCGTCAG CGAAGCCCTGAGAGAAGCTCCGCGCAGCTCTCTTCGCTGACCGACGGAGTCCTTCACGACCGAGCCACCGTGGCT GGCTTCCCCGGCTGTCTTCTCGGGCCCGTCGCCCCACCGCGCTCCCCGACTCCCCGAGCGGCGTGGAGACTTACC TCGGTAAGCGTGGCAACCGGCATAGCCTCTAATGTCGCCTTGGGCGTCGTCACGCCCGGGCTGTCTCCCTTGGCC GAGTCACCCCTGGCCGAGTCCGAGTCGCCGCCGCCGCCCGACTACGTGAACCCTCTCGAAGCCAGCTCGCGATGG TATCTCTCCGCCCGTGCCTCTGCCGTACGCTACGCCGCGAGCCTCGGCTTCAGCCTCTCCAACCGGTCCGACTCG ACGGCACCAGCCCCCACGCGCGATCTCTGGCTCGACTCGACCTTGTCCCGCTGGAGCGGACGTCGGAAGATCAAG GTTGACGTGTGGGTGCCGACCCGAATGTCAGCCGGGCCTCGCCCCGCCGTCATTGATCTTCACGGCGGTGGATGG ATCCTCGGCCAGGGCACTGACGATGCCCGCTGGGCAGGCGCCGTAATGGAAACACTCGATGCCGTCGTCTTCTCC GTCAACTACCGGTTGGCCCCGAGCTACCCCTTTCCGATTCCCATTGAGGACTGTGTCGATGCCGTGCTGCAGATC GCCAACCGCGCCGACGAGCTGGGCATCGATCGAAACAGCCTGTTCCTCTCGGGTTTCTCAGCCGGCGCCACCAAC GCACTCACCAGCTGGCTCATCATCCAGGATCCGTCACGGTGGGGCTATGACCTGCCTTCCGTGCCCCCAACCGTC GCCGGCCTCATACTCTTCTATCCTACGCTCGACATCACCATCTCGCGGCCGGAGAAGCGGCAGATGTGTGCCCGT CCTGAGCTGACGCTGTCTCCCAGCCTATCGGATCTCATCGACGCCTCATATGTCTACCCGCCCATCCCCCGCGAT CAGCGGACAGATTTCCGGCTGTCTCCTGGCCTCATGTCGGATGAGCTTTTGCAGAAGCTGCCTCCGCTGCATCTC TGCCTCTGCGAGTATGACATGCTCTTAGCCGAGGGATTCCGGTTCGCTCAGCGCCTGCAATACCATAATAAGCAC TTCTCCATGCGTGTCGTCAAGGGCGAAGCCCACGGTTGGGATAAACCTCCGCCACTTGTGCCCAAAGAGAGTGTC GGTATCGAGTACGGCGAGGCGACGCGGGCCGTGGCCAGGTGGTTGGGTAGAGACTGCGAAACGGATAACCAGAGC ATCGGCTCCAAAAGTCATCGGGTTATGCGGCTCCTCAAGCGTCCCAGTTACCTCTCGTTTCGGTCGAGAAGCGTG AGATAA |
Transcript | >Ophcf2|04223 ATGCCCCCCTTTTTGCTCCCAGCCACCTCCCTTTGCTCCTTCTCCGTGTCTCGTGACCTCGGTCATTGGCGTCAG CGAAGCCCTGAGAGAAGCTCCGCGCAGCTCTCTTCGCTGACCGACGGAGTCCTTCACGACCGAGCCACCGTGGCT GGCTTCCCCGGCTGTCTTCTCGGGCCCGTCGCCCCACCGCGCTCCCCGACTCCCCGAGCGGCGTGGAGACTTACC TCGGTAAGCGTGGCAACCGGCATAGCCTCTAATGTCGCCTTGGGCGTCGTCACGCCCGGGCTGTCTCCCTTGGCC GAGTCACCCCTGGCCGAGTCCGAGTCGCCGCCGCCGCCCGACTACGTGAACCCTCTCGAAGCCAGCTCGCGATGG TATCTCTCCGCCCGTGCCTCTGCCGTACGCTACGCCGCGAGCCTCGGCTTCAGCCTCTCCAACCGGTCCGACTCG ACGGCACCAGCCCCCACGCGCGATCTCTGGCTCGACTCGACCTTGTCCCGCTGGAGCGGACGTCGGAAGATCAAG GTTGACGTGTGGGTGCCGACCCGAATGTCAGCCGGGCCTCGCCCCGCCGTCATTGATCTTCACGGCGGTGGATGG ATCCTCGGCCAGGGCACTGACGATGCCCGCTGGGCAGGCGCCGTAATGGAAACACTCGATGCCGTCGTCTTCTCC GTCAACTACCGGTTGGCCCCGAGCTACCCCTTTCCGATTCCCATTGAGGACTGTGTCGATGCCGTGCTGCAGATC GCCAACCGCGCCGACGAGCTGGGCATCGATCGAAACAGCCTGTTCCTCTCGGGTTTCTCAGCCGGCGCCACCAAC GCACTCACCAGCTGGCTCATCATCCAGGATCCGTCACGGTGGGGCTATGACCTGCCTTCCGTGCCCCCAACCGTC GCCGGCCTCATACTCTTCTATCCTACGCTCGACATCACCATCTCGCGGCCGGAGAAGCGGCAGATGTGTGCCCGT CCTGAGCTGACGCTGTCTCCCAGCCTATCGGATCTCATCGACGCCTCATATGTCTACCCGCCCATCCCCCGCGAT CAGCGGACAGATTTCCGGCTGTCTCCTGGCCTCATGTCGGATGAGCTTTTGCAGAAGCTGCCTCCGCTGCATCTC TGCCTCTGCGAGTATGACATGCTCTTAGCCGAGGGATTCCGGTTCGCTCAGCGCCTGCAATACCATAATAAGCAC TTCTCCATGCGTGTCGTCAAGGGCGAAGCCCACGGTTGGGATAAACCTCCGCCACTTGTGCCCAAAGAGAGTGTC GGTATCGAGTACGGCGAGGCGACGCGGGCCGTGGCCAGGTGGTTGGGTAGAGACTGCGAAACGGATAACCAGAGC ATCGGCTCCAAAAGTCATCGGGTTATGCGGCTCCTCAAGCGTCCCAGTTACCTCTCGTTTCGGTCGAGAAGCGTG AGATAA |
Gene | >Ophcf2|04223 ATGCCCCCCTTTTTGCTCCCAGCCACCTCCCTTTGCTCCTTCTCCGTGTCTCGTGACCTCGGTCATTGGCGTCAG CGAAGCCCTGAGAGAAGCTCCGCGCAGCTCTCTTCGCTGACCGACGGAGTCCTTCACGACCGAGTCAGTTCACAA ACACGAACCTGTTCAAGACGTCGTGACGCTGAACGCTTTCTTTAGGCCACCGTGGCTGGCTTCCCCGGCTGTCTT CTCGGGCCCGTCGCCCCACCGCGCTCCCCGACTCCCCGAGCGGCGTGGAGACTGTCCATCCAGCCTTCACATGGG CGAACTGAAGTCGACCGTCACCTCCAGTACCTCGGTAAGCGTGGCAACCGGCATAGCCTCTAATGTCGCCTTGGG CGTCGTCACGCCCGGGCTGTCTCCCTTGGCCGAGTCACCCCTGGCCGAGTCCGAGTCGCCGCCGCCGCCCGACTA CGTGAACCCTCTCGAAGCCAGCTCGCGATGGTATCTCTCCGCCCGTGCCTCTGCCGTACGCTACGCCGCGAGCCT CGGCTTCAGCCTCTCCAACCGGTCCGACTCGACGGCACCAGCCCCCACGCGCGATCTCTGGCTCGACTCGACCTT GTCCCGCTGGAGCGGACGTCGGAAGATCAAGGTTGACGTGTGGGTGCCGACCCGAATGTCAGCCGGGCCTCGCCC CGCCGTCATTGATCTTCACGGCGGTGGATGGATCCTCGGCCAGGGCACTGACGATGCCCGCTGGGCAGGCGCCGT AATGGAAACACTCGATGCCGTCGTCTTCTCCGTCAACTACCGGTTGGCCCCGAGCTACCCCTTTCCGATTCCCAT TGAGGACTGTGTCGATGCCGTGCTGCAGATCGCCAACCGCGCCGACGAGCTGGGCATCGATCGAAACAGCCTGTT CCTCTCGGGTTTCTCAGCCGGCGCCACCAACGCACTCACCAGCTGGCTCATCATCCAGGATCCGTCACGGTGGGG CTATGACCTGCCTTCCGTGCCCCCAACCGTCGCCGGCCTCATACTCTTCTATCCTACGCTCGACATCACCATCTC GCGGCCGGAGAAGCGGCAGATGTGTGCCCGTCCTGAGCTGACGCTGTCTCCCAGCCTATCGGATCTCATCGACGC CTCATATGTCTACCCGCCCATCCCCCGCGATCAGCGGACAGATTTCCGGCTGTCTCCTGGCCTCATGTCGGATGA GCTTTTGCAGAAGCTGCCTCCGCTGCATCTCTGCCTCTGCGAGTATGACATGCTCTTAGCCGAGGGATTCCGGTT CGCTCAGCGCCTGCAATACCATAATAAGCACTTCTCCATGCGTGTCGTCAAGGGCGAAGCCCACGGTTGGGATAA ACCTCCGCCACTTGTGCCCAAAGAGAGTGTCGGTATCGAGTACGGCGAGGCGACGCGGGCCGTGGCCAGGTGGTT GGGTAGAGACTGCGAAACGGATAACCAGAGCATCGGCTCCAAAAGTCATCGGGTTATGCGGCTCCTCAAGCGTCC CAGTTACCTCTCGTTTCGGTCGAGAAGCGTGAGATAA |