Protein ID | Ophcf2|04208 |
Gene name | |
Location | scaffold_04:1151132..1152869 |
Strand | - |
Gene length (bp) | 1737 |
Transcript length (bp) | 1737 |
Coding sequence length (bp) | 1737 |
Protein length (aa) | 579 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 14 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 93.08 | 52.38 | 133.78 |
Alive | In ants, during behavior modification | 70.69 | 40.04 | 101.34 |
Dead | In ants, recently dead | 64.61 | 37.09 | 92.14 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.155674 | no |
Alive | Dead | 0.635985 | no |
Dead | Fungus | 0.046934 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|04208 MRSGRIWHRCLLQASRCPSWQLPVRISNAASCRSRRQTRLYSAVSSDSLAEEPIERIISWEERLFGPTPPTETAL KQSSIEELSTALMAMRPPQEWKPAFGQNFDRHSRIIQIVRHMVGVRNQAPNLFIYECMMDAMADPLGSADGVQKL LEDMQSQGIKPSLAICYSALAALAVHPDYKLRQDVLTLMRDLWFPVDTAAQQNVVVGLLRDEQYELAYARLMRMI EQDARIEAWVLDLFIMVFGKLGYLDEMLVLMHHRRTIEGASEEVMTTLFYYLLDVCSEAFHLDGTVFAWEATVKN SKVQPPDGIVENVLATAARHGKPQLATEALDMLSKRAWNLLPHHYEAVVEAFAASGDMAGALRILCIMRRKRDIL IKRDHTRSLKQAMEQSPTLVARAEAAARALAAEQKLPTALVGAIVEARAEISDSEAAMPLYNDMSSLCDTAADPL TMQTLMEHTTSNDTLRTIACQYAASVPPGSDPRRHPRDYIKLIPACAAAGEMDLAFRFAIHAVGSGRSREPLTWF KPLMDYAAAREDSRIWLIVEELRKRSDGEALVTVRLAMEQMKMAKKVSDRRRD* |
Coding | >Ophcf2|04208 ATGCGCAGCGGAAGAATCTGGCATCGCTGTCTCTTACAGGCTTCGAGATGTCCATCGTGGCAGCTCCCCGTTCGA ATAAGCAACGCAGCCTCTTGTCGGAGTCGTCGCCAGACTCGCCTTTACAGCGCTGTCTCCTCCGATTCTCTCGCT GAAGAGCCGATCGAGAGAATCATCAGCTGGGAGGAGCGCCTTTTTGGGCCGACGCCCCCTACTGAGACGGCGCTG AAGCAGTCCAGCATTGAAGAGCTTTCGACGGCGCTGATGGCCATGAGGCCTCCGCAAGAATGGAAGCCTGCTTTC GGGCAGAATTTCGATCGTCACAGCCGAATTATTCAGATTGTGCGGCACATGGTCGGCGTACGGAACCAGGCGCCG AATCTATTCATCTACGAATGCATGATGGACGCCATGGCTGACCCCCTGGGATCGGCCGACGGCGTTCAGAAGCTG CTCGAAGACATGCAGTCTCAGGGCATCAAGCCATCCCTGGCTATATGCTACAGCGCGCTGGCCGCGCTGGCCGTC CATCCCGACTACAAGCTACGACAGGACGTGCTGACCCTCATGCGCGATCTGTGGTTCCCCGTCGACACGGCGGCA CAGCAGAACGTAGTCGTCGGCCTGCTTCGCGACGAGCAATACGAGCTGGCGTATGCGAGACTGATGCGCATGATA GAGCAGGATGCCCGGATCGAAGCATGGGTTCTCGATCTCTTCATCATGGTGTTTGGAAAGCTCGGCTACCTGGAC GAGATGCTGGTGCTGATGCATCATCGGAGGACCATCGAAGGGGCATCGGAAGAGGTCATGACGACCTTGTTCTAC TATCTCCTAGACGTCTGTAGCGAGGCTTTTCACCTTGACGGCACCGTCTTCGCCTGGGAGGCGACGGTCAAGAAC TCCAAGGTGCAGCCGCCGGATGGCATCGTGGAGAATGTGCTGGCAACGGCGGCTCGACACGGCAAGCCGCAGCTG GCGACGGAAGCACTAGATATGCTCTCGAAACGGGCATGGAACCTGCTACCTCACCACTATGAGGCCGTCGTCGAG GCCTTTGCGGCCAGCGGCGACATGGCGGGCGCGCTGCGAATCCTCTGCATCATGCGCCGCAAGCGAGACATCCTC ATCAAGCGCGATCACACGCGCTCCCTCAAGCAGGCCATGGAGCAAAGCCCTACACTCGTGGCCCGAGCCGAAGCA GCAGCCCGCGCCCTCGCAGCAGAGCAGAAGCTTCCAACCGCCCTAGTAGGTGCCATCGTCGAGGCGCGCGCCGAA ATATCCGATAGCGAGGCAGCCATGCCCCTATACAACGACATGTCCAGCCTCTGCGACACAGCCGCCGACCCGCTA ACGATGCAGACGCTCATGGAGCACACAACCAGCAACGACACGCTCCGGACCATAGCCTGCCAATACGCCGCTTCC GTTCCTCCCGGCTCCGATCCGCGCCGCCACCCTCGCGACTACATCAAGCTGATACCCGCCTGCGCGGCCGCCGGT GAGATGGACTTGGCCTTTCGCTTCGCCATCCATGCTGTCGGCTCGGGCCGATCCAGAGAGCCGCTGACTTGGTTC AAGCCATTGATGGACTACGCTGCTGCGCGCGAGGACAGTCGTATTTGGCTTATTGTTGAGGAGTTGAGGAAGCGG TCTGATGGGGAGGCGCTCGTTACTGTCAGGTTGGCTATGGAGCAGATGAAGATGGCTAAGAAGGTTTCTGATCGA CGACGTGATTGA |
Transcript | >Ophcf2|04208 ATGCGCAGCGGAAGAATCTGGCATCGCTGTCTCTTACAGGCTTCGAGATGTCCATCGTGGCAGCTCCCCGTTCGA ATAAGCAACGCAGCCTCTTGTCGGAGTCGTCGCCAGACTCGCCTTTACAGCGCTGTCTCCTCCGATTCTCTCGCT GAAGAGCCGATCGAGAGAATCATCAGCTGGGAGGAGCGCCTTTTTGGGCCGACGCCCCCTACTGAGACGGCGCTG AAGCAGTCCAGCATTGAAGAGCTTTCGACGGCGCTGATGGCCATGAGGCCTCCGCAAGAATGGAAGCCTGCTTTC GGGCAGAATTTCGATCGTCACAGCCGAATTATTCAGATTGTGCGGCACATGGTCGGCGTACGGAACCAGGCGCCG AATCTATTCATCTACGAATGCATGATGGACGCCATGGCTGACCCCCTGGGATCGGCCGACGGCGTTCAGAAGCTG CTCGAAGACATGCAGTCTCAGGGCATCAAGCCATCCCTGGCTATATGCTACAGCGCGCTGGCCGCGCTGGCCGTC CATCCCGACTACAAGCTACGACAGGACGTGCTGACCCTCATGCGCGATCTGTGGTTCCCCGTCGACACGGCGGCA CAGCAGAACGTAGTCGTCGGCCTGCTTCGCGACGAGCAATACGAGCTGGCGTATGCGAGACTGATGCGCATGATA GAGCAGGATGCCCGGATCGAAGCATGGGTTCTCGATCTCTTCATCATGGTGTTTGGAAAGCTCGGCTACCTGGAC GAGATGCTGGTGCTGATGCATCATCGGAGGACCATCGAAGGGGCATCGGAAGAGGTCATGACGACCTTGTTCTAC TATCTCCTAGACGTCTGTAGCGAGGCTTTTCACCTTGACGGCACCGTCTTCGCCTGGGAGGCGACGGTCAAGAAC TCCAAGGTGCAGCCGCCGGATGGCATCGTGGAGAATGTGCTGGCAACGGCGGCTCGACACGGCAAGCCGCAGCTG GCGACGGAAGCACTAGATATGCTCTCGAAACGGGCATGGAACCTGCTACCTCACCACTATGAGGCCGTCGTCGAG GCCTTTGCGGCCAGCGGCGACATGGCGGGCGCGCTGCGAATCCTCTGCATCATGCGCCGCAAGCGAGACATCCTC ATCAAGCGCGATCACACGCGCTCCCTCAAGCAGGCCATGGAGCAAAGCCCTACACTCGTGGCCCGAGCCGAAGCA GCAGCCCGCGCCCTCGCAGCAGAGCAGAAGCTTCCAACCGCCCTAGTAGGTGCCATCGTCGAGGCGCGCGCCGAA ATATCCGATAGCGAGGCAGCCATGCCCCTATACAACGACATGTCCAGCCTCTGCGACACAGCCGCCGACCCGCTA ACGATGCAGACGCTCATGGAGCACACAACCAGCAACGACACGCTCCGGACCATAGCCTGCCAATACGCCGCTTCC GTTCCTCCCGGCTCCGATCCGCGCCGCCACCCTCGCGACTACATCAAGCTGATACCCGCCTGCGCGGCCGCCGGT GAGATGGACTTGGCCTTTCGCTTCGCCATCCATGCTGTCGGCTCGGGCCGATCCAGAGAGCCGCTGACTTGGTTC AAGCCATTGATGGACTACGCTGCTGCGCGCGAGGACAGTCGTATTTGGCTTATTGTTGAGGAGTTGAGGAAGCGG TCTGATGGGGAGGCGCTCGTTACTGTCAGGTTGGCTATGGAGCAGATGAAGATGGCTAAGAAGGTTTCTGATCGA CGACGTGATTGA |
Gene | >Ophcf2|04208 ATGCGCAGCGGAAGAATCTGGCATCGCTGTCTCTTACAGGCTTCGAGATGTCCATCGTGGCAGCTCCCCGTTCGA ATAAGCAACGCAGCCTCTTGTCGGAGTCGTCGCCAGACTCGCCTTTACAGCGCTGTCTCCTCCGATTCTCTCGCT GAAGAGCCGATCGAGAGAATCATCAGCTGGGAGGAGCGCCTTTTTGGGCCGACGCCCCCTACTGAGACGGCGCTG AAGCAGTCCAGCATTGAAGAGCTTTCGACGGCGCTGATGGCCATGAGGCCTCCGCAAGAATGGAAGCCTGCTTTC GGGCAGAATTTCGATCGTCACAGCCGAATTATTCAGATTGTGCGGCACATGGTCGGCGTACGGAACCAGGCGCCG AATCTATTCATCTACGAATGCATGATGGACGCCATGGCTGACCCCCTGGGATCGGCCGACGGCGTTCAGAAGCTG CTCGAAGACATGCAGTCTCAGGGCATCAAGCCATCCCTGGCTATATGCTACAGCGCGCTGGCCGCGCTGGCCGTC CATCCCGACTACAAGCTACGACAGGACGTGCTGACCCTCATGCGCGATCTGTGGTTCCCCGTCGACACGGCGGCA CAGCAGAACGTAGTCGTCGGCCTGCTTCGCGACGAGCAATACGAGCTGGCGTATGCGAGACTGATGCGCATGATA GAGCAGGATGCCCGGATCGAAGCATGGGTTCTCGATCTCTTCATCATGGTGTTTGGAAAGCTCGGCTACCTGGAC GAGATGCTGGTGCTGATGCATCATCGGAGGACCATCGAAGGGGCATCGGAAGAGGTCATGACGACCTTGTTCTAC TATCTCCTAGACGTCTGTAGCGAGGCTTTTCACCTTGACGGCACCGTCTTCGCCTGGGAGGCGACGGTCAAGAAC TCCAAGGTGCAGCCGCCGGATGGCATCGTGGAGAATGTGCTGGCAACGGCGGCTCGACACGGCAAGCCGCAGCTG GCGACGGAAGCACTAGATATGCTCTCGAAACGGGCATGGAACCTGCTACCTCACCACTATGAGGCCGTCGTCGAG GCCTTTGCGGCCAGCGGCGACATGGCGGGCGCGCTGCGAATCCTCTGCATCATGCGCCGCAAGCGAGACATCCTC ATCAAGCGCGATCACACGCGCTCCCTCAAGCAGGCCATGGAGCAAAGCCCTACACTCGTGGCCCGAGCCGAAGCA GCAGCCCGCGCCCTCGCAGCAGAGCAGAAGCTTCCAACCGCCCTAGTAGGTGCCATCGTCGAGGCGCGCGCCGAA ATATCCGATAGCGAGGCAGCCATGCCCCTATACAACGACATGTCCAGCCTCTGCGACACAGCCGCCGACCCGCTA ACGATGCAGACGCTCATGGAGCACACAACCAGCAACGACACGCTCCGGACCATAGCCTGCCAATACGCCGCTTCC GTTCCTCCCGGCTCCGATCCGCGCCGCCACCCTCGCGACTACATCAAGCTGATACCCGCCTGCGCGGCCGCCGGT GAGATGGACTTGGCCTTTCGCTTCGCCATCCATGCTGTCGGCTCGGGCCGATCCAGAGAGCCGCTGACTTGGTTC AAGCCATTGATGGACTACGCTGCTGCGCGCGAGGACAGTCGTATTTGGCTTATTGTTGAGGAGTTGAGGAAGCGG TCTGATGGGGAGGCGCTCGTTACTGTCAGGTTGGCTATGGAGCAGATGAAGATGGCTAAGAAGGTTTCTGATCGA CGACGTGATTGA |