Protein ID | Ophcf2|04139 |
Gene name | |
Location | scaffold_04:951473..953313 |
Strand | - |
Gene length (bp) | 1840 |
Transcript length (bp) | 1779 |
Coding sequence length (bp) | 1779 |
Protein length (aa) | 593 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 3.0E-11 | 37 | 204 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005615 | extracellular space | Yes |
GO:0090729 | toxin activity | Yes |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0110165 | cellular anatomical entity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1775 | 0.3542 | 0.7202 | 0.0677 | 0.1155 | 0.0421 | 0.1657 | 0.0953 | 0.0733 | 0.0083 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 24 | 0.925333 |
Orthofinder run ID | 4 |
Orthogroup | 5083 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|04139 MTRPRHIIRALSAASLCLPTTANPMLTHPDTALPTIVYRGDSRPPEVIKASGGFHPWGEYWHVDRAFSLENHLFV NEDFLDAVWNQLCYRQEDGGPAPELQVNYTTAYVSTTTSPREASVFASGGWIYILQATPNMLLLQENLFDEVPAL GGVYWSQVRGYIRAVRDWTRSSFADMIRDGRYSLNPDFDEERWGGLTASEVPEGWDPLHPAQSAHELMDSVGGSV GWNGSFPLFFPPEMEHRGDAFVSVDRRPAGSMQGTSRQPPEISPGNPRPAPDHLPGTSGQPPENLPGSSRQPPDH QQRTSPRPPNRCYASDATPNTNTNSCLPSPNHQSFEYVSSTNTDDSHESPPTKKHRKVTLDLIDDRQPTTLATSE GIIPEEIRRRIEQGIQTDQDCMFVLGQLNSMFPMLLHSSILRRSSSDARHCEKLLSPMPRTLLFLIWEGSRGRCP PCQKIDGLEVEVSLAEEALAGTWDTILVGVAGRKPHLVMARGPEAGFRVKKGFDLKSVFGEREVYLRDVDSVSLI DHAEVSVLERDEWLLQGVRLWARCAGSSQMLRVDRYRHLRLGMRHGRSWGPEVVWSDRIELGDWRTV* |
Coding | >Ophcf2|04139 ATGACACGTCCACGACACATCATCCGAGCCCTATCAGCAGCATCCCTCTGTCTGCCCACCACCGCCAACCCCATG CTCACCCACCCCGATACCGCCCTCCCAACCATCGTCTACCGCGGAGACTCCCGCCCCCCAGAAGTCATCAAAGCA AGCGGCGGCTTCCACCCCTGGGGCGAATACTGGCACGTAGACCGAGCCTTCAGCCTAGAAAACCACCTCTTCGTC AACGAGGACTTCCTCGACGCGGTATGGAACCAGCTCTGCTACCGACAAGAAGACGGCGGGCCGGCACCCGAGCTC CAAGTCAACTACACCACCGCCTACGTGTCGACGACGACATCACCCCGGGAGGCATCCGTGTTCGCCTCAGGCGGA TGGATATACATCCTTCAAGCGACGCCCAACATGCTGCTGCTACAGGAGAATCTCTTCGACGAGGTGCCGGCCCTG GGCGGCGTTTACTGGTCGCAGGTAAGGGGCTACATCCGTGCCGTGCGCGACTGGACACGGTCATCATTCGCCGAC ATGATCCGCGACGGCCGGTATAGTCTCAATCCGGACTTTGACGAGGAGAGATGGGGAGGTCTGACGGCGTCGGAG GTTCCGGAGGGGTGGGATCCTCTTCATCCGGCGCAGTCGGCTCACGAGTTGATGGATTCCGTGGGAGGTTCGGTC GGATGGAACGGCAGTTTCCCGCTTTTTTTTCCGCCCGAGATGGAGCACAGGGGTGACGCTTTCGTCTCTGTGGAT AGACGGCCGGCGGGCAGTATGCAGGGGACGTCCCGACAGCCTCCGGAGATATCCCCGGGCAACCCCCGGCCGGCT CCGGATCACCTACCCGGTACCTCCGGACAGCCTCCGGAGAATCTCCCGGGTTCTTCTCGTCAACCGCCGGATCAT CAACAGCGCACCTCCCCTCGGCCCCCAAACAGATGCTACGCCTCCGATGCAACCCCCAACACCAACACCAACTCC TGTCTCCCATCCCCCAATCACCAAAGCTTCGAGTACGTCTCCTCCACAAACACGGACGACAGCCATGAGTCCCCC CCAACCAAGAAGCACAGAAAAGTGACACTTGATCTCATCGACGACCGCCAACCCACAACACTGGCAACCTCGGAA GGCATCATCCCCGAGGAAATCCGCCGCCGAATCGAACAAGGCATCCAAACCGATCAAGACTGCATGTTCGTCCTC GGCCAGCTAAACTCCATGTTCCCCATGCTCCTCCACTCCAGCATACTCCGCCGATCGTCATCGGATGCCCGCCAC TGCGAGAAGCTCCTATCTCCCATGCCTCGAACCCTACTCTTCCTCATCTGGGAGGGTTCCCGCGGGAGATGTCCT CCCTGCCAGAAGATTGACGGGCTGGAGGTCGAGGTGAGTCTCGCGGAGGAGGCGCTGGCAGGGACGTGGGATACG ATTCTGGTGGGTGTGGCGGGGAGGAAGCCTCATTTGGTGATGGCCAGGGGGCCGGAGGCGGGATTCAGGGTGAAG AAGGGGTTTGATCTTAAGAGTGTGTTTGGAGAGAGGGAGGTTTATCTTCGGGACGTGGACAGCGTCAGCCTCATT GATCACGCCGAGGTCAGCGTCTTGGAGCGGGATGAATGGTTGCTACAAGGCGTCAGACTATGGGCTCGCTGTGCC GGTTCGTCGCAGATGCTACGTGTCGATCGGTATCGCCATCTGCGTCTCGGTATGCGGCATGGGAGGAGCTGGGGG CCGGAAGTCGTCTGGTCTGATAGGATCGAGCTGGGGGATTGGAGGACCGTGTGA |
Transcript | >Ophcf2|04139 ATGACACGTCCACGACACATCATCCGAGCCCTATCAGCAGCATCCCTCTGTCTGCCCACCACCGCCAACCCCATG CTCACCCACCCCGATACCGCCCTCCCAACCATCGTCTACCGCGGAGACTCCCGCCCCCCAGAAGTCATCAAAGCA AGCGGCGGCTTCCACCCCTGGGGCGAATACTGGCACGTAGACCGAGCCTTCAGCCTAGAAAACCACCTCTTCGTC AACGAGGACTTCCTCGACGCGGTATGGAACCAGCTCTGCTACCGACAAGAAGACGGCGGGCCGGCACCCGAGCTC CAAGTCAACTACACCACCGCCTACGTGTCGACGACGACATCACCCCGGGAGGCATCCGTGTTCGCCTCAGGCGGA TGGATATACATCCTTCAAGCGACGCCCAACATGCTGCTGCTACAGGAGAATCTCTTCGACGAGGTGCCGGCCCTG GGCGGCGTTTACTGGTCGCAGGTAAGGGGCTACATCCGTGCCGTGCGCGACTGGACACGGTCATCATTCGCCGAC ATGATCCGCGACGGCCGGTATAGTCTCAATCCGGACTTTGACGAGGAGAGATGGGGAGGTCTGACGGCGTCGGAG GTTCCGGAGGGGTGGGATCCTCTTCATCCGGCGCAGTCGGCTCACGAGTTGATGGATTCCGTGGGAGGTTCGGTC GGATGGAACGGCAGTTTCCCGCTTTTTTTTCCGCCCGAGATGGAGCACAGGGGTGACGCTTTCGTCTCTGTGGAT AGACGGCCGGCGGGCAGTATGCAGGGGACGTCCCGACAGCCTCCGGAGATATCCCCGGGCAACCCCCGGCCGGCT CCGGATCACCTACCCGGTACCTCCGGACAGCCTCCGGAGAATCTCCCGGGTTCTTCTCGTCAACCGCCGGATCAT CAACAGCGCACCTCCCCTCGGCCCCCAAACAGATGCTACGCCTCCGATGCAACCCCCAACACCAACACCAACTCC TGTCTCCCATCCCCCAATCACCAAAGCTTCGAGTACGTCTCCTCCACAAACACGGACGACAGCCATGAGTCCCCC CCAACCAAGAAGCACAGAAAAGTGACACTTGATCTCATCGACGACCGCCAACCCACAACACTGGCAACCTCGGAA GGCATCATCCCCGAGGAAATCCGCCGCCGAATCGAACAAGGCATCCAAACCGATCAAGACTGCATGTTCGTCCTC GGCCAGCTAAACTCCATGTTCCCCATGCTCCTCCACTCCAGCATACTCCGCCGATCGTCATCGGATGCCCGCCAC TGCGAGAAGCTCCTATCTCCCATGCCTCGAACCCTACTCTTCCTCATCTGGGAGGGTTCCCGCGGGAGATGTCCT CCCTGCCAGAAGATTGACGGGCTGGAGGTCGAGGTGAGTCTCGCGGAGGAGGCGCTGGCAGGGACGTGGGATACG ATTCTGGTGGGTGTGGCGGGGAGGAAGCCTCATTTGGTGATGGCCAGGGGGCCGGAGGCGGGATTCAGGGTGAAG AAGGGGTTTGATCTTAAGAGTGTGTTTGGAGAGAGGGAGGTTTATCTTCGGGACGTGGACAGCGTCAGCCTCATT GATCACGCCGAGGTCAGCGTCTTGGAGCGGGATGAATGGTTGCTACAAGGCGTCAGACTATGGGCTCGCTGTGCC GGTTCGTCGCAGATGCTACGTGTCGATCGGTATCGCCATCTGCGTCTCGGTATGCGGCATGGGAGGAGCTGGGGG CCGGAAGTCGTCTGGTCTGATAGGATCGAGCTGGGGGATTGGAGGACCGTGTGA |
Gene | >Ophcf2|04139 ATGACACGTCCACGACACATCATCCGAGCCCTATCAGCAGCATCCCTCTGTCTGCCCACCACCGCCAACCCCATG CTCACCCACCCCGATACCGCCCTCCCAACCATCGTCTACCGCGGAGACTCCCGCCCCCCAGAAGTCATCAAAGCA AGCGGCGGCTTCCACCCCTGGGGCGAATACTGGCACGTAGACCGAGCCTTCAGCCTAGAAAACCACCTCTTCGTC AACGAGGACTTCCTCGACGCGGTATGGAACCAGCTCTGCTACCGACAAGAAGACGGCGGGCCGGCACCCGAGCTC CAAGTCAACTACACCACCGCCTACGTGTCGACGACGACATCACCCCGGGAGGCATCCGTGTTCGCCTCAGGCGGA TGGATATACATCCTTCAAGCGACGCCCAACATGCTGCTGCTACAGGAGAATCTCTTCGACGAGGTGCCGGCCCTG GGCGGCGTTTACTGGTCGCAGGTAAGGGGCTACATCCGTGCCGTGCGCGACTGGACACGGTCATCATTCGCCGAC ATGATCCGCGACGGCCGGTATAGTCTCAATCCGGACTTTGACGAGGAGAGATGGGGAGGTCTGACGGCGTCGGAG GTTCCGGAGGGGTGGGATCCTCTTCATCCGGCGCAGTCGGCTCACGAGTTGATGGATTCCGTGGGAGGTTCGGTC GGATGGAACGGCAGTTTCCCGCTTTTTTTTCCGCCCGAGATGGAGCACAGGGGTGACGCTTTCGTCTCTGTGGAT AGACGGCCGGCGGGCAGTATGCAGGGGACGTCCCGACAGCCTCCGGAGATATCCCCGGGCAACCCCCGGCCGGCT CCGGATCACCTACCCGGTACCTCCGGACAGCCTCCGGAGAATCTCCCGGGTTCTTCTCGTCAACCGCCGGATCAT CAACAGCGCACCTCCCCTCGGCCCCCAAACAGATGCTACGCCTCCGATGCAACCCCCAACACCAACACCAACTCC TGTCTCCCATCCCCCAATCACCAAAGCTTCGAGTACGTCTCCTCCACAAACACGGACGACAGCCATGAGTCCCCC CCAACCAAGAAGCACAGAAAAGTGACACTTGATCTCATCGACGACCGCCAACCCACAACACTGGCAACCTCGGAA GGCATCATCCCCGAGGAAATCCGCCGCCGAATCGAACAAGGCATCCAAACCGATCAAGACTGCATGTTCGTCCTC GGCCAGCTAAACTCCATGTTCCCCATGCTCCTCCACTCCAGCATACTCCGCCGATCGTCATCGGATGCCCGCCAC TGCGAGAAGCTCCTATCTCCCATGCCTCGAACCCTACTCTTCCTCATCTGGGAGGGTTCCCGCGGGAGATGTCCT CCCTGCCAGAAGATTGACGGGCTGGAGGTCGAGGTGAGTCTCGCGGAGGAGGCGCTGGCAGGGACGTGGGATACG ATTCTGGTGGGTGTGGCGGGGAGGAAGCCTCATTTGGTGATGGCCAGGGGGCCGGAGGCGGGATTCAGGGTGAAG AAGGGGTTTGATCTTAAGAGTGTGTTTGGAGAGAGGGAGGTTTATCTTCGGGACGTGGACAGCGTCAGCCTCATT GATCACGCCGAGGTCAGCGTCTTGGAGCGGGATGAATGGTTGCTACAAGGTAACGTCGACTCACGACGCTCTACT TCTATCTATACTGATGACGTGTGTTGTCTACGTAGGCGTCAGACTATGGGCTCGCTGTGCCGGTTCGTCGCAGAT GCTACGTGTCGATCGGTATCGCCATCTGCGTCTCGGTATGCGGCATGGGAGGAGCTGGGGGCCGGAAGTCGTCTG GTCTGATAGGATCGAGCTGGGGGATTGGAGGACCGTGTGA |