© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|04134 |
| Gene name | |
| Location | scaffold_04:939488..941367 |
| Strand | + |
| Gene length (bp) | 1879 |
| Transcript length (bp) | 1722 |
| Coding sequence length (bp) | 1722 |
| Protein length (aa) | 574 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 9.3E-20 | 117 | 396 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.3E-09 | 424 | 547 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 68 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 61 | 80 | 19 |
| 2 | 120 | 142 | 22 |
| 3 | 154 | 173 | 19 |
| 4 | 183 | 205 | 22 |
| 5 | 218 | 240 | 22 |
| 6 | 250 | 272 | 22 |
| 7 | 331 | 353 | 22 |
| 8 | 373 | 395 | 22 |
| 9 | 449 | 471 | 22 |
| 10 | 486 | 508 | 22 |
| 11 | 515 | 534 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|04134 MASSKSVQPRRLGPEEDEADPSGVQTTVTTRLLRADSESDSGRWTGVDDFEGLPWWRKPSVLWLLGPFSLFTLAF GGTIVPKLNLVLDLVCRRYYADQSTLLAVGVDNPMCRTPEVQKDVATFLLVINLVTGGLSAIVAPKLGHLSDRHG RRKLLALASCGGLLGEIITVLAAKFPDTVDYRWLVLGAFFDGMTGSFTAGSILSQSYTSDCTPPSRRAVSIGYIQ ACLFMGLAFGPLLSGYFVKWTGSLLSMFYVAICCHAFFVLFAGFVMPESLSKKRQIAAREKWKRAQEALGTAGVF SWLSVVKKSNPFIPLRMLWPTGWGTSTRLRLNLLALAICDAIFLGVAFAVGPVLMLYAESMFHWGNFETSRFVSI LSLTRVFVLMGLLPLINYIGRVRPAARRQKLFGTAPVEKNAGADGLDIWLLRFALIFEVIACVGYTLARDENSFV ASGLVTALGGLGSATTQAAVTKHMPPELVGQMLGAIGMLHALSRIVGPVVFSGLYAATVKTFPQAVFLALGGLFA FALVITLVIRPHVHWHESVEEQPRPQPRGLYSTIVQSLPVDEDQVRLQ* |
| Coding | >Ophcf2|04134 ATGGCGTCTTCCAAATCGGTCCAACCCCGTCGTCTCGGGCCCGAAGAAGATGAAGCCGACCCGTCCGGAGTTCAG ACGACGGTAACCACCCGGCTGCTCCGCGCCGATTCGGAGTCGGATTCCGGCCGCTGGACCGGCGTCGATGATTTC GAGGGTCTGCCGTGGTGGCGCAAGCCTTCGGTCTTGTGGCTGCTCGGCCCCTTTTCGCTCTTCACTCTTGCCTTT GGCGGTACCATCGTTCCCAAACTAAACTTGGTGCTGGACCTCGTCTGTAGACGATATTATGCCGATCAGAGCACG CTTCTCGCCGTCGGCGTCGACAATCCCATGTGCAGAACGCCCGAGGTGCAAAAAGACGTCGCAACCTTTCTGCTC GTCATCAACCTCGTCACGGGCGGCTTGAGCGCCATCGTCGCTCCCAAACTCGGCCACCTATCCGACCGCCATGGC CGCCGAAAGCTGCTGGCCTTGGCGTCATGTGGCGGCCTGCTAGGCGAGATCATCACCGTCCTGGCCGCCAAGTTT CCGGACACGGTCGACTATCGCTGGCTCGTTCTCGGCGCCTTCTTCGACGGCATGACGGGCTCCTTCACCGCCGGC AGCATCCTCAGTCAGTCGTATACGAGCGACTGCACGCCCCCGTCCAGACGCGCCGTGTCCATCGGATACATCCAG GCCTGCCTCTTCATGGGCCTGGCCTTTGGTCCTCTGCTGTCCGGCTATTTTGTCAAGTGGACGGGCAGTCTCTTG TCCATGTTCTATGTCGCCATCTGCTGCCACGCCTTCTTCGTGCTCTTCGCCGGCTTCGTCATGCCCGAGTCTCTG TCCAAAAAGAGGCAAATAGCGGCCCGAGAAAAGTGGAAGCGCGCACAGGAGGCTCTAGGCACGGCCGGTGTCTTC TCCTGGCTGTCCGTCGTCAAGAAGTCGAACCCGTTTATTCCCCTGCGGATGTTGTGGCCCACCGGCTGGGGGACG TCGACACGGCTGCGTCTCAACCTGCTGGCGTTGGCCATCTGCGACGCCATCTTCCTCGGGGTCGCCTTTGCCGTC GGGCCCGTCCTCATGCTGTACGCCGAGTCCATGTTTCATTGGGGAAACTTTGAGACGTCGCGCTTCGTCTCCATC TTGTCCTTGACCCGCGTCTTCGTCCTCATGGGGCTGCTGCCGCTCATCAATTACATAGGACGTGTGCGGCCCGCG GCCCGGCGGCAGAAGCTATTCGGCACGGCTCCGGTAGAGAAGAACGCCGGGGCGGACGGGCTCGACATCTGGCTC CTCCGCTTCGCCCTGATATTCGAGGTGATTGCCTGTGTAGGCTACACGTTGGCGAGAGACGAGAACTCGTTCGTC GCCAGCGGCCTGGTCACGGCTCTGGGCGGCCTCGGGAGCGCCACGACACAGGCGGCCGTAACTAAGCACATGCCG CCGGAGCTGGTGGGCCAGATGCTAGGTGCCATCGGCATGTTACACGCCCTGTCGAGAATCGTCGGCCCCGTCGTC TTCAGTGGACTGTACGCCGCGACTGTCAAGACGTTTCCGCAGGCCGTCTTCCTCGCTCTCGGCGGCCTGTTTGCC TTTGCTCTGGTGATTACTCTGGTGATCAGACCGCATGTCCACTGGCACGAATCCGTCGAGGAGCAGCCCAGACCG CAACCCCGTGGGCTTTACAGCACCATTGTGCAATCGCTGCCCGTCGACGAGGATCAGGTGCGCTTACAGTAA |
| Transcript | >Ophcf2|04134 ATGGCGTCTTCCAAATCGGTCCAACCCCGTCGTCTCGGGCCCGAAGAAGATGAAGCCGACCCGTCCGGAGTTCAG ACGACGGTAACCACCCGGCTGCTCCGCGCCGATTCGGAGTCGGATTCCGGCCGCTGGACCGGCGTCGATGATTTC GAGGGTCTGCCGTGGTGGCGCAAGCCTTCGGTCTTGTGGCTGCTCGGCCCCTTTTCGCTCTTCACTCTTGCCTTT GGCGGTACCATCGTTCCCAAACTAAACTTGGTGCTGGACCTCGTCTGTAGACGATATTATGCCGATCAGAGCACG CTTCTCGCCGTCGGCGTCGACAATCCCATGTGCAGAACGCCCGAGGTGCAAAAAGACGTCGCAACCTTTCTGCTC GTCATCAACCTCGTCACGGGCGGCTTGAGCGCCATCGTCGCTCCCAAACTCGGCCACCTATCCGACCGCCATGGC CGCCGAAAGCTGCTGGCCTTGGCGTCATGTGGCGGCCTGCTAGGCGAGATCATCACCGTCCTGGCCGCCAAGTTT CCGGACACGGTCGACTATCGCTGGCTCGTTCTCGGCGCCTTCTTCGACGGCATGACGGGCTCCTTCACCGCCGGC AGCATCCTCAGTCAGTCGTATACGAGCGACTGCACGCCCCCGTCCAGACGCGCCGTGTCCATCGGATACATCCAG GCCTGCCTCTTCATGGGCCTGGCCTTTGGTCCTCTGCTGTCCGGCTATTTTGTCAAGTGGACGGGCAGTCTCTTG TCCATGTTCTATGTCGCCATCTGCTGCCACGCCTTCTTCGTGCTCTTCGCCGGCTTCGTCATGCCCGAGTCTCTG TCCAAAAAGAGGCAAATAGCGGCCCGAGAAAAGTGGAAGCGCGCACAGGAGGCTCTAGGCACGGCCGGTGTCTTC TCCTGGCTGTCCGTCGTCAAGAAGTCGAACCCGTTTATTCCCCTGCGGATGTTGTGGCCCACCGGCTGGGGGACG TCGACACGGCTGCGTCTCAACCTGCTGGCGTTGGCCATCTGCGACGCCATCTTCCTCGGGGTCGCCTTTGCCGTC GGGCCCGTCCTCATGCTGTACGCCGAGTCCATGTTTCATTGGGGAAACTTTGAGACGTCGCGCTTCGTCTCCATC TTGTCCTTGACCCGCGTCTTCGTCCTCATGGGGCTGCTGCCGCTCATCAATTACATAGGACGTGTGCGGCCCGCG GCCCGGCGGCAGAAGCTATTCGGCACGGCTCCGGTAGAGAAGAACGCCGGGGCGGACGGGCTCGACATCTGGCTC CTCCGCTTCGCCCTGATATTCGAGGTGATTGCCTGTGTAGGCTACACGTTGGCGAGAGACGAGAACTCGTTCGTC GCCAGCGGCCTGGTCACGGCTCTGGGCGGCCTCGGGAGCGCCACGACACAGGCGGCCGTAACTAAGCACATGCCG CCGGAGCTGGTGGGCCAGATGCTAGGTGCCATCGGCATGTTACACGCCCTGTCGAGAATCGTCGGCCCCGTCGTC TTCAGTGGACTGTACGCCGCGACTGTCAAGACGTTTCCGCAGGCCGTCTTCCTCGCTCTCGGCGGCCTGTTTGCC TTTGCTCTGGTGATTACTCTGGTGATCAGACCGCATGTCCACTGGCACGAATCCGTCGAGGAGCAGCCCAGACCG CAACCCCGTGGGCTTTACAGCACCATTGTGCAATCGCTGCCCGTCGACGAGGATCAGGTGCGCTTACAGTAA |
| Gene | >Ophcf2|04134 ATGGCGTCTTCCAAATCGGTCCAACCCCGTCGTCTCGGGCCCGAAGAAGATGAAGCCGACCCGTCCGGAGTTCAG ACGACGGTAACCACCCGGCTGCTCCGCGCCGATTCGGAGTCGGATTCCGGCCGCTGGACCGGCGTCGATGATTTC GAGGGTCTGCCGTGGTGGCGCAAGCCTTCGGTATATCCTCTGCTGGCGCTGGAGATTCCCATAGGCTGATGCACG AGGCCAGGTCTTGTGGCTGCTCGGCCCCTTTTCGCTCTTCACTCTTGCCTTTGGCGGTACCATCGTTCCCAAACT AAACTTGTGAGCCTTGTTCTGCGCCGACTCAACTCTAGCCGTTCTGACCGTTCACAAGGGTGCTGGACCTCGTCT GTAGACGATATTATGCCGATCAGAGCACGCTTCTCGCCGTCGGCGTCGACAATCCCATGTGCAGAACGCCCGAGG TGCAAAAAGACGTCGCAACCTTTCTGCTCGTCATCAACCTCGTCACGGGCGGCTTGAGCGCCATCGTCGCTCCCA AACTCGGCCACCTATCCGACCGCCATGGCCGCCGAAAGCTGCTGGCCTTGGCGTCATGTGGCGGCCTGCTAGGCG AGATCATCACCGTCCTGGCCGCCAAGTTTCCGGACACGGTCGACTATCGCTGGCTCGTTCTCGGCGCCTTCTTCG ACGGCATGACGGGCTCCTTCACCGCCGGCAGCATCCTCAGTCAGTCGTATACGAGCGACTGCACGCCCCCGTCCA GACGCGCCGTGTCCATCGGATACATCCAGGCCTGCCTCTTCATGGGCCTGGCCTTTGGTCCTCTGCTGTCCGGCT ATTTTGTCAAGTGGACGGGCAGTCTCTTGTCCATGTTCTATGTCGCCATCTGCTGCCACGCCTTCTTCGTGCTCT TCGCCGGCTTCGTCATGCCCGAGTCTCTGTCCAAAAAGAGGCAAATAGCGGCCCGAGAAAAGTGGAAGCGCGCAC AGGAGGCTCTAGGCACGGCCGGTGTCTTCTCCTGGCTGTCCGTCGTCAAGAAGTCGAACCCGTTTATTCCCCTGC GGATGTTGTGGCCCACCGGCTGGGGGACGTCGACACGGCTGCGTCTCAACCTGCTGGCGTTGGCCATCTGCGACG CCATCTTCCTCGGGGTCGCCTTTGCCGTCGGGCCCGTCCTCATGCTGTACGCCGAGTCCATGTTTCATTGGGGAA ACTTTGAGACGTCGCGCTTCGTCTCCATCTTGTCCTTGACCCGCGTCTTCGTCCTCATGGGGCTGCTGCCGCTCA TCAATTACATAGGACGTGTGCGGCCCGCGGCCCGGCGGCAGAAGCTATTCGGCACGGCTCCGGTAGAGAAGAACG CCGGGGCGGACGGGCTCGACATCTGGCTCCTCCGCTTCGCCCTGATATTCGAGGTGATTGCCTGTGTAGGCTACA CGTTGGCGAGAGACGAGAACTCGTTCGTCGCCAGCGGCCTGGTCACGGCTCTGGGCGGCCTCGGGAGCGCCACGA CACAGGCGGCCGTAACTAAGCACATGCCGCCGGAGCTGGTGGGCCAGATGCTAGGTGCCATCGGCATGTTACACG CCCTGTCGAGAATCGTCGGCCCCGTCGTCTTCAGTGGACTGTACGCCGCGACTGTCAAGACGTTTCCGCAGGCCG TCTTCCTCGCTCTCGGCGGCCTGTTTGCCTTTGCTCTGGTGATTACTCTGGTGATCAGACCGCATGGTATGTGCT GCTGATAGATCTTTACCTTTGTAATGACGGCTGACTCTCGACAGTCCACTGGCACGAATCCGTCGAGGAGCAGCC CAGACCGCAACCCCGTGGGCTTTACAGCACCATTGTGCAATCGCTGCCCGTCGACGAGGATCAGGTGCGCTTACA GTAA |