Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|04128
Gene name
Location	scaffold_04:921748..923172
Strand	+
Gene length (bp)	1424
Transcript length (bp)	984
Coding sequence length (bp)	984
Protein length (aa)	328

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00149	Metallophos	Calcineurin-like phosphoesterase	3.1E-38	69	260

GO

GO Term	Description	Terminal node
GO:0016787	hydrolase activity	Yes
GO:0003674	molecular_function	No
GO:0003824	catalytic activity	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 21	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
Fungus	Fungus in pure culture	176.08	99.48	252.67
Alive	In ants, during behavior modification	289.02	145.30	432.74
Dead	In ants, recently dead	241.07	130.84	351.30

Differential expression

Label1	Label2	Q-value	Significant difference
Alive	Fungus	0.012022	yes
Alive	Dead	0.338079	no
Dead	Fungus	0.104912	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|04128 MDTNMEDVGRAPADVSPVQSEPASIPTLDGWIESLMNCKQLAESDVQRLCDKAREVLQEESNVQPVKCPVTVCGD IHGQFHDLMELFKIGGPNPDTNYLFMGDYVDRGYYSVETVTLLVALKIRYPQRITILRGNHESRQITQVYGFYDE CLRKYGNANVWKYFTDLFDYLPLTALIDNQIFCLHGGLSPSIDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRC GWGISPRGAGYTFGQDISEAFNHNNGLTLIARAHQLVMEGYNWSQDRNVVTIFSAPNYCYRCGNQAAIMEIDEHL KYTFLQFDPCPRAGEPMVSRRTPDYFL*
Coding	>Ophcf2\|04128 ATGGATACCAATATGGAGGACGTTGGGAGGGCGCCTGCCGACGTGTCTCCCGTGCAGAGCGAGCCGGCGTCGATT CCTACGCTCGACGGCTGGATCGAGAGCTTGATGAACTGCAAGCAGCTCGCCGAGTCGGATGTGCAGCGGCTTTGT GACAAGGCGCGCGAGGTTTTGCAGGAAGAGTCCAATGTGCAACCCGTTAAATGTCCGGTGACTGTTTGCGGCGAC ATTCATGGCCAGTTTCATGACTTGATGGAGCTGTTCAAGATTGGCGGGCCCAACCCGGATACCAACTACCTCTTC ATGGGCGACTACGTCGACAGAGGCTACTATTCGGTCGAGACGGTGACGCTACTCGTGGCCCTCAAGATTCGCTAT CCTCAACGCATAACCATTCTGCGCGGGAACCACGAGTCGCGGCAAATCACGCAGGTCTACGGCTTCTACGACGAG TGCCTGCGCAAGTACGGAAACGCAAACGTGTGGAAGTACTTTACCGACCTGTTTGACTACCTGCCGCTCACCGCC CTCATCGACAACCAAATCTTTTGTCTCCACGGCGGTCTCTCGCCAAGCATCGACACGCTGGACAATATACGGGCT CTAGATCGTATCCAGGAGGTGCCTCACGAGGGTCCCATGTGTGACCTCTTGTGGTCGGACCCCGACGACCGTTGC GGCTGGGGCATCTCTCCCCGTGGTGCGGGCTATACCTTTGGGCAGGACATCTCGGAGGCCTTTAACCACAACAAC GGCCTGACGCTGATTGCACGAGCGCATCAGCTCGTCATGGAGGGCTACAACTGGTCTCAGGACCGCAACGTGGTG ACCATCTTTTCCGCGCCCAACTACTGCTACAGATGCGGCAACCAGGCCGCCATCATGGAGATTGACGAGCACCTC AAGTATACCTTCTTGCAGTTTGATCCATGCCCGAGGGCGGGCGAGCCCATGGTGTCGAGACGAACGCCCGACTAC TTCCTCTGA
Transcript	>Ophcf2\|04128 ATGGATACCAATATGGAGGACGTTGGGAGGGCGCCTGCCGACGTGTCTCCCGTGCAGAGCGAGCCGGCGTCGATT CCTACGCTCGACGGCTGGATCGAGAGCTTGATGAACTGCAAGCAGCTCGCCGAGTCGGATGTGCAGCGGCTTTGT GACAAGGCGCGCGAGGTTTTGCAGGAAGAGTCCAATGTGCAACCCGTTAAATGTCCGGTGACTGTTTGCGGCGAC ATTCATGGCCAGTTTCATGACTTGATGGAGCTGTTCAAGATTGGCGGGCCCAACCCGGATACCAACTACCTCTTC ATGGGCGACTACGTCGACAGAGGCTACTATTCGGTCGAGACGGTGACGCTACTCGTGGCCCTCAAGATTCGCTAT CCTCAACGCATAACCATTCTGCGCGGGAACCACGAGTCGCGGCAAATCACGCAGGTCTACGGCTTCTACGACGAG TGCCTGCGCAAGTACGGAAACGCAAACGTGTGGAAGTACTTTACCGACCTGTTTGACTACCTGCCGCTCACCGCC CTCATCGACAACCAAATCTTTTGTCTCCACGGCGGTCTCTCGCCAAGCATCGACACGCTGGACAATATACGGGCT CTAGATCGTATCCAGGAGGTGCCTCACGAGGGTCCCATGTGTGACCTCTTGTGGTCGGACCCCGACGACCGTTGC GGCTGGGGCATCTCTCCCCGTGGTGCGGGCTATACCTTTGGGCAGGACATCTCGGAGGCCTTTAACCACAACAAC GGCCTGACGCTGATTGCACGAGCGCATCAGCTCGTCATGGAGGGCTACAACTGGTCTCAGGACCGCAACGTGGTG ACCATCTTTTCCGCGCCCAACTACTGCTACAGATGCGGCAACCAGGCCGCCATCATGGAGATTGACGAGCACCTC AAGTATACCTTCTTGCAGTTTGATCCATGCCCGAGGGCGGGCGAGCCCATGGTGTCGAGACGAACGCCCGACTAC TTCCTCTGA
Gene	>Ophcf2\|04128 ATGGATACCAATATGGAGGACGTTGGGAGGGCGCCTGCCGACGTGTCTCCCGTGCAGAGCGAGCCGGCGTCGATT CCTACGCTCGACGGCTGGATCGAGAGCTTGATGAACTGCAAGCAGCTCGCCGAGTCGGATGTGCAGCGGCTTTGT GACAAGGTGAGCCATCCTGGGTAGCGTGCGCTCGTCGGTGGTTATCTCGCAACCCGACGATGAGTTTCTGTTTTT TTTTTTTTTCCCCGGCAGAGGGTGCGTTCGACGTGAGGGGTTGGGCATCCGTGCTGATGGACGACGACTGGATAG GCGCGCGAGGTTTTGCAGGAAGAGTCCAATGTGCAACCCGTTGTACGTGGCTTGGTCCCGATGTCGCCCGTGAGC AGCTGATTGAGTGGGATAGAAATGTCCGGTGACTGTTTGCGGCGACATTCATGGCCAGTTTCATGACTTGATGGA GCTGTTCAAGATTGGCGGGCCCAACCCGGATACCAACTACCTCTTCATGGGTGCGGCGCCCGTCATAATTTTCCA TGTCGAAGCGAAGCTGACGCCTATCGCAGGCGACTACGTCGACAGAGGCTACTATTCGGTCGAGACGGTGACGCT ACTCGTGGCCCTCAAGATTCGCTATCCTCAACGCATAACCATTCTGCGCGGGAACCACGAGTCGCGGCAAATCAC GCAGGTCTACGGCTTCTACGACGAGTGCCTGCGCAAGTACGGAAACGCAAACGTGTGGAAGTACTTTACCGACCT GTTTGACTACCTGCCGCTCACCGCCCTCATCGACAACCAAATCTTTTGTCTCCACGGCGGTCTCTCGCCAAGCAT CGACACGCTGGACAATATACGGGCTCTAGATCGTATCCAGGAGGTGCCTCACGAGGGTCCCATGTGTGACCTCTT GTGGTCGGACCCCGACGACCGTTGCGGCTGGGGCATCTCTCCCCGTGGTGCGGGCTATACCTTTGGGCAGGACAT CTCGGAGGCCTTTAACCACAACAACGGCCTGACGCTGATTGCACGAGCGCATCAGCTCGTCATGGAGGGCTACAA CTGGTCTCAGGACCGCAACGTGGTGACCATCTTTTCCGGTGCGTTTTGGGGGTTTTCAAGAGCGACTTGTGCGTG GTGGCGCTTCAGATGCTGACGGGCGGCGCAGCGCCCAACTACTGCTACAGATGCGGCAACCAGGCCGCCATCATG GAGATTGACGAGCACCTCAAGTATACCTTGTAAGGAAGGCTACGTCACCGAGAGAGGAGAGTGAAGAGGAGAGGG TAACTGACGTTTTGACGGTTCAGCTTGCAGTTTGATCCATGCCCGAGGGCGGGCGAGCCCATGGTGTCGAGACGT GAGTATCGGATGAGGCGGCTGCGTGGCGCCGGAGCTGACGACGGGGAACAGGAACGCCCGACTACTTCCTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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