Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04126
Gene name
Locationscaffold_04:917602..918337
Strand-
Gene length (bp)735
Transcript length (bp)528
Coding sequence length (bp)528
Protein length (aa) 176

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02064 MAS20 MAS20 protein import receptor 8.2E-41 15 143

GO

GO Term Description Terminal node
GO:0006605 protein targeting Yes
GO:0006886 intracellular protein transport Yes
GO:0005742 mitochondrial outer membrane translocase complex Yes
GO:0051234 establishment of localization No
GO:0051641 cellular localization No
GO:0070727 cellular macromolecule localization No
GO:0098799 outer mitochondrial membrane protein complex No
GO:0009987 cellular process No
GO:0006810 transport No
GO:0033036 macromolecule localization No
GO:0098798 mitochondrial protein-containing complex No
GO:0051649 establishment of localization in cell No
GO:0071702 organic substance transport No
GO:0008104 protein localization No
GO:0032991 protein-containing complex No
GO:0015031 protein transport No
GO:0005575 cellular_component No
GO:0071705 nitrogen compound transport No
GO:0098796 membrane protein complex No
GO:0045184 establishment of protein localization No
GO:0008150 biological_process No
GO:0046907 intracellular transport No
GO:0051179 localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 7 26 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04126
MVQTSTIVKASAFSFVAAAVAYAIYFDHRRRTDPEFRRELRRNARRRVRLEREEAEASTRRRREAIKRKVDAAKQ
EGFPTTVEERETFFNESVNAGEVLSADPASAVEAALAFYKGLKVYPSPGELIRIYDNTVPKPILDVLAEMIAYDS
SLDIRTRPAGHGGIDLGGIPNVGLD*
Coding >Ophcf2|04126
ATGGTGCAGACGTCGACCATCGTCAAGGCCTCGGCCTTTTCCTTCGTCGCCGCAGCAGTCGCTTATGCCATCTAC
TTCGACCACCGGCGCCGAACCGACCCCGAGTTCCGCCGCGAGCTACGAAGAAATGCCAGGCGAAGGGTCCGTCTC
GAGAGAGAAGAGGCCGAGGCATCGACCCGTCGTCGCCGCGAGGCCATTAAGAGAAAAGTCGACGCCGCCAAGCAG
GAAGGCTTTCCCACCACCGTCGAGGAGCGAGAAACGTTTTTCAACGAGTCCGTCAATGCCGGAGAGGTGCTGAGC
GCCGACCCTGCGAGCGCCGTCGAGGCCGCGCTGGCTTTCTACAAGGGCCTCAAGGTCTACCCCTCGCCGGGCGAG
CTCATCAGGATCTACGACAATACCGTTCCCAAGCCTATACTAGATGTCCTAGCCGAGATGATCGCCTACGACTCC
AGCCTCGACATCCGTACGCGTCCCGCCGGCCACGGCGGCATCGACCTGGGCGGAATTCCAAACGTCGGTCTCGAC
TAG
Transcript >Ophcf2|04126
ATGGTGCAGACGTCGACCATCGTCAAGGCCTCGGCCTTTTCCTTCGTCGCCGCAGCAGTCGCTTATGCCATCTAC
TTCGACCACCGGCGCCGAACCGACCCCGAGTTCCGCCGCGAGCTACGAAGAAATGCCAGGCGAAGGGTCCGTCTC
GAGAGAGAAGAGGCCGAGGCATCGACCCGTCGTCGCCGCGAGGCCATTAAGAGAAAAGTCGACGCCGCCAAGCAG
GAAGGCTTTCCCACCACCGTCGAGGAGCGAGAAACGTTTTTCAACGAGTCCGTCAATGCCGGAGAGGTGCTGAGC
GCCGACCCTGCGAGCGCCGTCGAGGCCGCGCTGGCTTTCTACAAGGGCCTCAAGGTCTACCCCTCGCCGGGCGAG
CTCATCAGGATCTACGACAATACCGTTCCCAAGCCTATACTAGATGTCCTAGCCGAGATGATCGCCTACGACTCC
AGCCTCGACATCCGTACGCGTCCCGCCGGCCACGGCGGCATCGACCTGGGCGGAATTCCAAACGTCGGTCTCGAC
TAG
Gene >Ophcf2|04126
ATGGTGCAGACGTCGACCATCGTCAAGGCCTCGGCCTTTTCCTTCGTCGCCGCAGCAGTCGGTAAGCAACAAGCA
GGAGAATCCTCCAAAACACAACCATAACCCATCACGAGCACGCACGCACAATACGCTGATGCAACCGACTACCAG
CTTATGCCATCTACTTCGACCACCGGCGCCGAACCGACCCCGAGTTCCGCCGCGAGCTACGAAGAAATGCCAGGC
GAAGGGTCCGTCTCGAGAGAGAAGAGGCCGAGGCATCGACCCGTCGTCGCCGCGAGGCCATTAAGAGAAAAGTCG
ACGCCGCCAAGCAGGAAGGCTTTCCCACCACCGTCGAGGAGCGAGAAACGTTTTTCAACGAGTCCGTCAATGCCG
GAGAGGTGCTGAGCGCCGACCGTACGTCGTATCTTTCGCTGTTGGAGTTTCGGTGCTGACGGGACACCTCTTCGC
CAGCTGCGAGCGCCGTCGAGGCCGCGCTGGCTTTCTACAAGGGCCTCAAGGTCTACCCCTCGCCGGGCGAGCTCA
TCAGGATCTACGACAATACCGTTCCCAAGGTTTGCCTCTCCGATACCCTCCTCTAGCGAACTGTCCACCAACCCA
ATCCTCTCTCTCCAGCCTATACTAGATGTCCTAGCCGAGATGATCGCCTACGACTCCAGCCTCGACATCCGTACG
CGTCCCGCCGGCCACGGCGGCATCGACCTGGGCGGAATTCCAAACGTCGGTCTCGACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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