Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04107
Gene name
Locationscaffold_04:875582..876634
Strand-
Gene length (bp)1052
Transcript length (bp)936
Coding sequence length (bp)936
Protein length (aa) 312

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06687 SUR7 SUR7/PalI family 1.3E-22 9 284

GO

GO Term Description Terminal node
GO:0005886 plasma membrane Yes
GO:0005575 cellular_component No
GO:0016020 membrane No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 188 210 22
3 217 239 22
4 267 286 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04107
MALFNRHLVLLPVVLALISFVLTSLTLFAGHKQGFMEDYAIIRINTSRIGHNLLEKRDVSQPKLLADLQGWLDDK
KDGFEDKVRGKINDGVGRLTDKLVSRLHLAQWYSLHIMDACEGTYSPNFTAPGAKVKTTRCTTSDPSNRLNLTRL
VDSQLDLGPLHLSLADMGWSDSVQDKIDGLNDALTGLFVVYVLAMGCSGLSMLASMSAFFMPAMGILTLSNMAIG
SLGGLSCLIGSIIVTATASKAAKHINSRGVRFGISAERGVKFYTISWVATAFMLTVAAFWLAQYLSTRRHEPAPE
MSEKRRAKEEA*
Coding >Ophcf2|04107
ATGGCTCTCTTCAACAGACACCTCGTCTTGCTGCCCGTCGTGCTCGCTCTCATCAGTTTCGTCCTCACCTCCCTC
ACCCTCTTCGCCGGCCATAAGCAGGGTTTTATGGAGGACTATGCCATTATCCGGATCAACACCTCACGCATCGGC
CATAATCTCTTGGAAAAGCGTGACGTCAGCCAGCCCAAACTCCTTGCCGACCTTCAAGGCTGGCTCGACGACAAA
AAGGACGGCTTCGAGGATAAAGTCAGAGGCAAGATCAACGATGGCGTCGGCCGTCTCACCGATAAGCTCGTTAGC
CGCCTGCATCTCGCTCAGTGGTATTCGCTGCACATCATGGATGCCTGCGAGGGCACCTATTCGCCCAACTTTACC
GCGCCTGGCGCCAAGGTCAAGACGACGCGCTGCACCACGTCGGATCCGAGCAATCGCCTCAACCTGACGCGCCTC
GTCGACAGCCAGCTCGATCTCGGTCCCCTCCACCTCAGTCTCGCAGACATGGGCTGGTCCGACAGCGTCCAAGAT
AAGATCGACGGGCTCAACGACGCCCTGACAGGCCTCTTCGTCGTCTACGTCCTTGCCATGGGCTGCAGCGGCCTC
TCCATGCTAGCAAGCATGAGCGCCTTCTTCATGCCAGCCATGGGCATCCTGACGCTATCCAACATGGCCATCGGC
TCACTCGGAGGCCTATCATGCCTCATCGGCAGCATCATCGTCACCGCCACCGCCTCCAAGGCAGCCAAGCACATC
AACAGCCGAGGCGTCCGCTTCGGCATTTCGGCCGAGCGAGGCGTCAAGTTCTACACCATCAGCTGGGTAGCCACG
GCCTTTATGCTCACCGTCGCCGCCTTCTGGCTCGCGCAGTACTTGTCCACGAGGCGGCACGAGCCCGCTCCCGAG
ATGAGCGAGAAGCGACGGGCGAAGGAGGAGGCGTGA
Transcript >Ophcf2|04107
ATGGCTCTCTTCAACAGACACCTCGTCTTGCTGCCCGTCGTGCTCGCTCTCATCAGTTTCGTCCTCACCTCCCTC
ACCCTCTTCGCCGGCCATAAGCAGGGTTTTATGGAGGACTATGCCATTATCCGGATCAACACCTCACGCATCGGC
CATAATCTCTTGGAAAAGCGTGACGTCAGCCAGCCCAAACTCCTTGCCGACCTTCAAGGCTGGCTCGACGACAAA
AAGGACGGCTTCGAGGATAAAGTCAGAGGCAAGATCAACGATGGCGTCGGCCGTCTCACCGATAAGCTCGTTAGC
CGCCTGCATCTCGCTCAGTGGTATTCGCTGCACATCATGGATGCCTGCGAGGGCACCTATTCGCCCAACTTTACC
GCGCCTGGCGCCAAGGTCAAGACGACGCGCTGCACCACGTCGGATCCGAGCAATCGCCTCAACCTGACGCGCCTC
GTCGACAGCCAGCTCGATCTCGGTCCCCTCCACCTCAGTCTCGCAGACATGGGCTGGTCCGACAGCGTCCAAGAT
AAGATCGACGGGCTCAACGACGCCCTGACAGGCCTCTTCGTCGTCTACGTCCTTGCCATGGGCTGCAGCGGCCTC
TCCATGCTAGCAAGCATGAGCGCCTTCTTCATGCCAGCCATGGGCATCCTGACGCTATCCAACATGGCCATCGGC
TCACTCGGAGGCCTATCATGCCTCATCGGCAGCATCATCGTCACCGCCACCGCCTCCAAGGCAGCCAAGCACATC
AACAGCCGAGGCGTCCGCTTCGGCATTTCGGCCGAGCGAGGCGTCAAGTTCTACACCATCAGCTGGGTAGCCACG
GCCTTTATGCTCACCGTCGCCGCCTTCTGGCTCGCGCAGTACTTGTCCACGAGGCGGCACGAGCCCGCTCCCGAG
ATGAGCGAGAAGCGACGGGCGAAGGAGGAGGCGTGA
Gene >Ophcf2|04107
ATGGCTCTCTTCAACAGACACCTCGTCTTGCTGCCCGTCGTGCTCGCTCTCATCAGTTTCGTCCTCACCTCCCTC
ACCCTCTTCGCCGGCCATAAGCAGGGTTTTATGGAGGACTATGCCATTATCCGGGTAAGCTTGCACCCTTTCATG
TCTTGGCCCATTCGCAAAATCTTACAGTTGCCAGATCAACACCTCACGCATCGGCCATAATCTCTTGGAAAAGCG
TGACGTCAGCCAGCCCAAACTCCTTGCCGACCTTCAAGGCTGGCTCGACGACAAAAAGGACGGCTTCGAGGATAA
AGTCAGAGGCAAGATCAACGATGGCGTCGGCCGTCTCACCGATAAGCTCGTTAGCCGCCTGCATCTCGCTCAGTG
GTATTCGCTGCACATCATGGATGCCTGCGAGGGCACCTATTCGCCCAACTTTACCGCGCCTGGCGCCAAGGTCAA
GACGACGCGCTGCACCACGTCGGATCCGAGCAGTGAGAAGCCCAAGCCCAGTTCTCCCAGACCAAGACAAGACGT
CTGACACATGATGCATAGATCGCCTCAACCTGACGCGCCTCGTCGACAGCCAGCTCGATCTCGGTCCCCTCCACC
TCAGTCTCGCAGACATGGGCTGGTCCGACAGCGTCCAAGATAAGATCGACGGGCTCAACGACGCCCTGACAGGCC
TCTTCGTCGTCTACGTCCTTGCCATGGGCTGCAGCGGCCTCTCCATGCTAGCAAGCATGAGCGCCTTCTTCATGC
CAGCCATGGGCATCCTGACGCTATCCAACATGGCCATCGGCTCACTCGGAGGCCTATCATGCCTCATCGGCAGCA
TCATCGTCACCGCCACCGCCTCCAAGGCAGCCAAGCACATCAACAGCCGAGGCGTCCGCTTCGGCATTTCGGCCG
AGCGAGGCGTCAAGTTCTACACCATCAGCTGGGTAGCCACGGCCTTTATGCTCACCGTCGCCGCCTTCTGGCTCG
CGCAGTACTTGTCCACGAGGCGGCACGAGCCCGCTCCCGAGATGAGCGAGAAGCGACGGGCGAAGGAGGAGGCGT
GA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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