Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04093
Gene name
Locationscaffold_04:842272..843412
Strand+
Gene length (bp)1140
Transcript length (bp)1029
Coding sequence length (bp)1029
Protein length (aa) 343

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 319 341 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04093
MAHAILPSADLTPEFNALLSKHGAPCVVGRKSLDADALEGFLSEAYRINAHIARLHRELRDVRQAYLSTEQPRRT
LSRSATGQARVLTDSEREDVDANAKQMIRELNAGIRALDEAEQLRRETESAVIRGKYAGGLSILSNWASGGGPAA
AKSAEYVAAEARARHMDLHRDAILWFLRQRLEMCCRTQQDMMETRLTRELEKSRVLVPPPLAEFSAPSPLATQTV
ASDEAAAPQGLTAEQIQMFEEDNQDMMKHYESKLDKVRTAERSLLEISELQSMLVNNLATQSAHIEQLVADSVST
TDNVGGGNKQLKKATERRSAARYTFFAAGGLCAFLIVWDLLI*
Coding >Ophcf2|04093
ATGGCGCACGCCATCTTGCCGTCGGCCGATCTGACTCCCGAGTTCAATGCTCTTCTCAGCAAACATGGAGCCCCT
TGCGTCGTAGGGAGGAAGAGTCTCGATGCTGACGCGCTCGAGGGCTTCCTCAGCGAGGCCTACCGCATCAACGCG
CACATCGCCCGCCTGCATCGCGAGCTTAGGGATGTCAGACAGGCCTACTTGTCGACGGAGCAACCACGTCGTACT
TTGAGCCGTTCGGCCACTGGCCAGGCGCGTGTGCTGACGGACAGCGAGCGCGAGGACGTCGACGCCAATGCCAAG
CAAATGATTCGCGAGCTCAACGCGGGGATACGCGCCCTCGATGAAGCAGAGCAGCTTCGTCGCGAGACGGAAAGC
GCAGTCATCCGCGGCAAATACGCCGGCGGGCTCAGCATCCTTAGCAACTGGGCGTCCGGGGGCGGCCCGGCTGCT
GCCAAGTCGGCCGAGTACGTGGCGGCTGAGGCTCGCGCGCGACATATGGACCTTCATCGCGATGCTATTCTCTGG
TTCTTGCGGCAGCGACTCGAGATGTGCTGTCGCACTCAACAAGATATGATGGAGACGAGGCTGACGCGGGAATTG
GAAAAGTCGCGCGTCCTTGTACCGCCTCCTCTGGCTGAATTTTCTGCGCCGTCGCCGCTTGCGACACAGACGGTG
GCGTCCGACGAAGCCGCCGCGCCACAGGGCCTCACGGCGGAGCAGATTCAGATGTTTGAGGAGGACAATCAAGAC
ATGATGAAGCACTACGAGAGCAAGCTGGACAAAGTCAGAACGGCGGAAAGGTCGCTTCTCGAGATATCCGAGCTA
CAGTCGATGCTGGTGAATAATCTGGCGACACAGTCGGCGCATATTGAGCAGCTCGTCGCCGACTCGGTATCGACG
ACGGACAACGTCGGCGGCGGAAACAAGCAACTTAAGAAGGCGACGGAGCGGCGCAGTGCGGCACGCTACACTTTT
TTTGCGGCCGGTGGACTGTGCGCCTTTCTGATCGTCTGGGACCTGCTCATCTGA
Transcript >Ophcf2|04093
ATGGCGCACGCCATCTTGCCGTCGGCCGATCTGACTCCCGAGTTCAATGCTCTTCTCAGCAAACATGGAGCCCCT
TGCGTCGTAGGGAGGAAGAGTCTCGATGCTGACGCGCTCGAGGGCTTCCTCAGCGAGGCCTACCGCATCAACGCG
CACATCGCCCGCCTGCATCGCGAGCTTAGGGATGTCAGACAGGCCTACTTGTCGACGGAGCAACCACGTCGTACT
TTGAGCCGTTCGGCCACTGGCCAGGCGCGTGTGCTGACGGACAGCGAGCGCGAGGACGTCGACGCCAATGCCAAG
CAAATGATTCGCGAGCTCAACGCGGGGATACGCGCCCTCGATGAAGCAGAGCAGCTTCGTCGCGAGACGGAAAGC
GCAGTCATCCGCGGCAAATACGCCGGCGGGCTCAGCATCCTTAGCAACTGGGCGTCCGGGGGCGGCCCGGCTGCT
GCCAAGTCGGCCGAGTACGTGGCGGCTGAGGCTCGCGCGCGACATATGGACCTTCATCGCGATGCTATTCTCTGG
TTCTTGCGGCAGCGACTCGAGATGTGCTGTCGCACTCAACAAGATATGATGGAGACGAGGCTGACGCGGGAATTG
GAAAAGTCGCGCGTCCTTGTACCGCCTCCTCTGGCTGAATTTTCTGCGCCGTCGCCGCTTGCGACACAGACGGTG
GCGTCCGACGAAGCCGCCGCGCCACAGGGCCTCACGGCGGAGCAGATTCAGATGTTTGAGGAGGACAATCAAGAC
ATGATGAAGCACTACGAGAGCAAGCTGGACAAAGTCAGAACGGCGGAAAGGTCGCTTCTCGAGATATCCGAGCTA
CAGTCGATGCTGGTGAATAATCTGGCGACACAGTCGGCGCATATTGAGCAGCTCGTCGCCGACTCGGTATCGACG
ACGGACAACGTCGGCGGCGGAAACAAGCAACTTAAGAAGGCGACGGAGCGGCGCAGTGCGGCACGCTACACTTTT
TTTGCGGCCGGTGGACTGTGCGCCTTTCTGATCGTCTGGGACCTGCTCATCTGA
Gene >Ophcf2|04093
ATGGCGCACGCCATCTTGCCGTCGGCCGATCTGACTCCCGAGTTCAATGCTCTTCTCAGCAAACATGGAGCCCCT
TGCGTCGTAGGGAGGAAGAGTCTCGATGCTGACGCGCTCGAGGGCTTCCTCAGCGAGGCCTACCGCATCGTGAGT
CCATAATCTCATCCGGCCTCGTTCGTCTGCTAACACGTCGCGAGTCTAGAACGCGCACATCGCCCGCCTGCATCG
CGAGCTTAGGGATGTCAGACAGGCCTACTTGTCGACGGAGCAACCACGTCGTACTTTGAGCCGTTCGGCCACTGG
CCAGGCGCGTGTGCTGACGGACAGCGAGCGCGAGGACGTCGACGCCAATGCCAAGCAAATGATTCGCGAGCTCAA
CGCGGGGATACGCGCCCTCGATGAAGCAGAGCAGCTTCGTCGCGAGACGGAAAGCGCAGTCATCCGCGGCAAATA
CGCCGGCGGGCTCAGCATCCTTAGCAACTGGGCGTCCGGGGGCGGCCCGGCTGCTGCCAAGTCGGCCGAGTACGT
GGCGGCTGAGGCTCGCGCGCGACATATGGACCTTCATCGCGATGCTATTCTCTGGTTCTTGCGGCAGCGACTCGA
GATGTGCTGTCGCACTCAACAAGATATGATGGAGACGAGGCTGACGCGGGAATTGGAAAAGTCGCGCGTCCTTGT
ACCGCCTCCTCTGGCTGAATTTTCTGCGCCGTCGCCGCTTGCGACACAGACGGTGGCGTCCGACGAAGCCGCCGC
GCCACAGGGCCTCACGGCGGAGCAGATTCAGATGTTTGAGGAGGACAATCAAGACATGATGAAGCACTACGAGAG
CAAGCTGGACAAAGTCAGGTACGAGATGAATATTCGAATGCTGGCACCGGTCGCAACAGCTGACGGTCCTACAGA
ACGGCGGAAAGGTCGCTTCTCGAGATATCCGAGCTACAGTCGATGCTGGTGAATAATCTGGCGACACAGTCGGCG
CATATTGAGCAGCTCGTCGCCGACTCGGTATCGACGACGGACAACGTCGGCGGCGGAAACAAGCAACTTAAGAAG
GCGACGGAGCGGCGCAGTGCGGCACGCTACACTTTTTTTGCGGCCGGTGGACTGTGCGCCTTTCTGATCGTCTGG
GACCTGCTCATCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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