Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04092
Gene name
Locationscaffold_04:839655..841191
Strand-
Gene length (bp)1536
Transcript length (bp)1536
Coding sequence length (bp)1536
Protein length (aa) 512

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 3.3E-48 51 449

GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0051179 localization No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0051234 establishment of localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 62 0.5

Transmembrane Domains

Domain # Start End Length
1 45 67 22
2 79 101 22
3 111 130 19
4 137 159 22
5 169 191 22
6 198 220 22
7 282 304 22
8 316 338 22
9 369 391 22
10 403 425 22
11 461 483 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 4.66 1.45 7.87
Alive In ants, during behavior modification 17.31 7.93 26.70
Dead In ants, recently dead 12.96 5.67 20.25

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.000238 yes
Alive Dead 0.159900 no
Dead Fungus 0.000454 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04092
MDIDICQAQHPPDGADPERPCRPEHEDSFDSDPPYSTFPRPTRTWIMAMVTISSIVSPTTASIYFPVLNAVADSL
DVSISLINLTLTTYMVMQGLSPTVFGDFGDMAGRRPAFTVAFTIYLLANVGLALQRNYAALLVLRCLQSAGSSGT
LALSYAVVADLASPCERGVYMGFINAGATLGPALGPVLGGILGQSFGWPSIFCFCAIFVSVWLVTWILWVPETCR
VVVGNGSIPPPPWNMTLVDLIRCRGRNQRPETAPKVHLRLPNPLRTLHVVFRKEEGLILLVSAIIYLNFILVSAT
LSTIFRTIYQYNELEVGLCYLPYGIGSCLASLVQGYVVDWNYRRIARRRGDLAAGRTKREDLIAFPIETARIQLV
YPALLVGAAALIGWGWALEAETNVAVPLVLLFVIGMLVPTSFSVLNTLIVDLNPDATATAAAANNLVRCSFGAAA
TAVIQYMLNAMGRGWCFTLLALLMVACFAGLRVLENCGPRWRAERAGRTVEGGGRTVSLEK*
Coding >Ophcf2|04092
ATGGACATCGATATCTGTCAGGCCCAACACCCCCCCGACGGCGCCGATCCGGAGCGCCCTTGTCGTCCCGAGCAT
GAAGACTCGTTCGACTCCGATCCGCCGTATAGCACCTTCCCACGCCCAACCCGGACATGGATCATGGCCATGGTG
ACCATCTCGAGCATCGTCTCGCCCACGACAGCCAGCATCTACTTTCCCGTCCTCAACGCCGTGGCCGACAGCCTC
GATGTCTCCATCTCGCTCATCAACCTCACGCTGACGACTTACATGGTCATGCAGGGCCTGTCGCCCACCGTCTTT
GGCGACTTCGGCGACATGGCCGGTCGAAGGCCCGCCTTTACCGTCGCCTTCACCATCTACCTGCTCGCCAACGTC
GGCCTCGCCCTGCAGCGCAACTACGCCGCCCTTCTCGTCCTCCGCTGTCTTCAGTCGGCCGGCAGTAGCGGTACG
TTGGCTCTCAGTTATGCCGTTGTTGCAGACTTGGCCTCTCCCTGCGAGAGGGGCGTCTACATGGGCTTCATAAAC
GCCGGTGCTACCCTCGGCCCGGCCTTGGGGCCCGTCCTCGGAGGCATCCTTGGCCAGTCCTTCGGGTGGCCGTCC
ATCTTTTGCTTCTGTGCCATCTTCGTCTCTGTTTGGCTCGTCACCTGGATCTTGTGGGTGCCGGAGACATGCCGG
GTCGTCGTCGGCAACGGCTCAATCCCGCCGCCGCCGTGGAACATGACTCTCGTCGACTTGATCCGCTGCCGGGGT
CGAAATCAGCGGCCAGAAACGGCGCCCAAGGTCCACTTACGGCTACCGAATCCGCTGCGGACGCTTCACGTCGTC
TTCCGTAAGGAGGAGGGCCTCATACTACTCGTATCCGCCATCATCTACCTCAACTTCATCCTTGTGTCCGCCACT
TTGTCGACCATCTTCAGAACCATCTATCAGTACAATGAGCTCGAGGTCGGCCTCTGTTACCTACCCTACGGTATC
GGCTCTTGCTTGGCCAGCCTCGTACAGGGTTACGTCGTCGACTGGAACTATCGCAGGATCGCCCGCCGACGGGGC
GACTTGGCAGCGGGCCGCACCAAGAGAGAGGACCTCATCGCATTTCCCATTGAGACGGCCCGCATCCAACTCGTC
TATCCCGCCTTGCTGGTAGGAGCCGCCGCCCTCATCGGCTGGGGATGGGCCCTGGAGGCTGAAACGAATGTGGCC
GTGCCGCTGGTGCTCCTCTTCGTCATCGGCATGCTCGTGCCGACCTCATTCAGCGTTCTCAACACGCTTATCGTC
GACCTCAACCCGGATGCCACAGCCACCGCCGCCGCTGCCAACAACTTGGTACGCTGCTCTTTTGGTGCCGCCGCC
ACGGCCGTCATCCAATACATGCTCAACGCAATGGGTCGGGGCTGGTGCTTTACCTTGCTGGCCCTACTCATGGTG
GCCTGCTTCGCCGGTTTGAGAGTATTGGAGAACTGCGGTCCACGCTGGAGGGCTGAAAGGGCTGGCCGTACTGTC
GAGGGGGGCGGCCGGACCGTGTCACTGGAGAAGTAA
Transcript >Ophcf2|04092
ATGGACATCGATATCTGTCAGGCCCAACACCCCCCCGACGGCGCCGATCCGGAGCGCCCTTGTCGTCCCGAGCAT
GAAGACTCGTTCGACTCCGATCCGCCGTATAGCACCTTCCCACGCCCAACCCGGACATGGATCATGGCCATGGTG
ACCATCTCGAGCATCGTCTCGCCCACGACAGCCAGCATCTACTTTCCCGTCCTCAACGCCGTGGCCGACAGCCTC
GATGTCTCCATCTCGCTCATCAACCTCACGCTGACGACTTACATGGTCATGCAGGGCCTGTCGCCCACCGTCTTT
GGCGACTTCGGCGACATGGCCGGTCGAAGGCCCGCCTTTACCGTCGCCTTCACCATCTACCTGCTCGCCAACGTC
GGCCTCGCCCTGCAGCGCAACTACGCCGCCCTTCTCGTCCTCCGCTGTCTTCAGTCGGCCGGCAGTAGCGGTACG
TTGGCTCTCAGTTATGCCGTTGTTGCAGACTTGGCCTCTCCCTGCGAGAGGGGCGTCTACATGGGCTTCATAAAC
GCCGGTGCTACCCTCGGCCCGGCCTTGGGGCCCGTCCTCGGAGGCATCCTTGGCCAGTCCTTCGGGTGGCCGTCC
ATCTTTTGCTTCTGTGCCATCTTCGTCTCTGTTTGGCTCGTCACCTGGATCTTGTGGGTGCCGGAGACATGCCGG
GTCGTCGTCGGCAACGGCTCAATCCCGCCGCCGCCGTGGAACATGACTCTCGTCGACTTGATCCGCTGCCGGGGT
CGAAATCAGCGGCCAGAAACGGCGCCCAAGGTCCACTTACGGCTACCGAATCCGCTGCGGACGCTTCACGTCGTC
TTCCGTAAGGAGGAGGGCCTCATACTACTCGTATCCGCCATCATCTACCTCAACTTCATCCTTGTGTCCGCCACT
TTGTCGACCATCTTCAGAACCATCTATCAGTACAATGAGCTCGAGGTCGGCCTCTGTTACCTACCCTACGGTATC
GGCTCTTGCTTGGCCAGCCTCGTACAGGGTTACGTCGTCGACTGGAACTATCGCAGGATCGCCCGCCGACGGGGC
GACTTGGCAGCGGGCCGCACCAAGAGAGAGGACCTCATCGCATTTCCCATTGAGACGGCCCGCATCCAACTCGTC
TATCCCGCCTTGCTGGTAGGAGCCGCCGCCCTCATCGGCTGGGGATGGGCCCTGGAGGCTGAAACGAATGTGGCC
GTGCCGCTGGTGCTCCTCTTCGTCATCGGCATGCTCGTGCCGACCTCATTCAGCGTTCTCAACACGCTTATCGTC
GACCTCAACCCGGATGCCACAGCCACCGCCGCCGCTGCCAACAACTTGGTACGCTGCTCTTTTGGTGCCGCCGCC
ACGGCCGTCATCCAATACATGCTCAACGCAATGGGTCGGGGCTGGTGCTTTACCTTGCTGGCCCTACTCATGGTG
GCCTGCTTCGCCGGTTTGAGAGTATTGGAGAACTGCGGTCCACGCTGGAGGGCTGAAAGGGCTGGCCGTACTGTC
GAGGGGGGCGGCCGGACCGTGTCACTGGAGAAGTAA
Gene >Ophcf2|04092
ATGGACATCGATATCTGTCAGGCCCAACACCCCCCCGACGGCGCCGATCCGGAGCGCCCTTGTCGTCCCGAGCAT
GAAGACTCGTTCGACTCCGATCCGCCGTATAGCACCTTCCCACGCCCAACCCGGACATGGATCATGGCCATGGTG
ACCATCTCGAGCATCGTCTCGCCCACGACAGCCAGCATCTACTTTCCCGTCCTCAACGCCGTGGCCGACAGCCTC
GATGTCTCCATCTCGCTCATCAACCTCACGCTGACGACTTACATGGTCATGCAGGGCCTGTCGCCCACCGTCTTT
GGCGACTTCGGCGACATGGCCGGTCGAAGGCCCGCCTTTACCGTCGCCTTCACCATCTACCTGCTCGCCAACGTC
GGCCTCGCCCTGCAGCGCAACTACGCCGCCCTTCTCGTCCTCCGCTGTCTTCAGTCGGCCGGCAGTAGCGGTACG
TTGGCTCTCAGTTATGCCGTTGTTGCAGACTTGGCCTCTCCCTGCGAGAGGGGCGTCTACATGGGCTTCATAAAC
GCCGGTGCTACCCTCGGCCCGGCCTTGGGGCCCGTCCTCGGAGGCATCCTTGGCCAGTCCTTCGGGTGGCCGTCC
ATCTTTTGCTTCTGTGCCATCTTCGTCTCTGTTTGGCTCGTCACCTGGATCTTGTGGGTGCCGGAGACATGCCGG
GTCGTCGTCGGCAACGGCTCAATCCCGCCGCCGCCGTGGAACATGACTCTCGTCGACTTGATCCGCTGCCGGGGT
CGAAATCAGCGGCCAGAAACGGCGCCCAAGGTCCACTTACGGCTACCGAATCCGCTGCGGACGCTTCACGTCGTC
TTCCGTAAGGAGGAGGGCCTCATACTACTCGTATCCGCCATCATCTACCTCAACTTCATCCTTGTGTCCGCCACT
TTGTCGACCATCTTCAGAACCATCTATCAGTACAATGAGCTCGAGGTCGGCCTCTGTTACCTACCCTACGGTATC
GGCTCTTGCTTGGCCAGCCTCGTACAGGGTTACGTCGTCGACTGGAACTATCGCAGGATCGCCCGCCGACGGGGC
GACTTGGCAGCGGGCCGCACCAAGAGAGAGGACCTCATCGCATTTCCCATTGAGACGGCCCGCATCCAACTCGTC
TATCCCGCCTTGCTGGTAGGAGCCGCCGCCCTCATCGGCTGGGGATGGGCCCTGGAGGCTGAAACGAATGTGGCC
GTGCCGCTGGTGCTCCTCTTCGTCATCGGCATGCTCGTGCCGACCTCATTCAGCGTTCTCAACACGCTTATCGTC
GACCTCAACCCGGATGCCACAGCCACCGCCGCCGCTGCCAACAACTTGGTACGCTGCTCTTTTGGTGCCGCCGCC
ACGGCCGTCATCCAATACATGCTCAACGCAATGGGTCGGGGCTGGTGCTTTACCTTGCTGGCCCTACTCATGGTG
GCCTGCTTCGCCGGTTTGAGAGTATTGGAGAACTGCGGTCCACGCTGGAGGGCTGAAAGGGCTGGCCGTACTGTC
GAGGGGGGCGGCCGGACCGTGTCACTGGAGAAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail