Protein ID | Ophcf2|04053 |
Gene name | |
Location | scaffold_04:734228..735630 |
Strand | - |
Gene length (bp) | 1402 |
Transcript length (bp) | 1344 |
Coding sequence length (bp) | 1344 |
Protein length (aa) | 448 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00561 | Abhydrolase_1 | alpha/beta hydrolase fold | 1.1E-18 | 101 | 427 |
PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 2.8E-15 | 102 | 432 |
PF12146 | Hydrolase_4 | Serine aminopeptidase, S33 | 3.7E-13 | 98 | 218 |
PF06028 | DUF915 | Alpha/beta hydrolase of unknown function (DUF915) | 5.2E-05 | 140 | 199 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 51 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 48.66 | 26.98 | 70.34 |
Alive | In ants, during behavior modification | 123.06 | 66.16 | 179.96 |
Dead | In ants, recently dead | 123.00 | 68.61 | 177.39 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.000238 | yes |
Alive | Dead | 0.998183 | no |
Dead | Fungus | 0.000238 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|04053 MSTTTTEGLQQQKLPQQRPPSMYFPLGYKDAAYQWWTGVAPTVAERKVLSFVPQLREAVDSLAAAAAGTRIWRRS LVPLSGKNRALNEVCVERSGEAVDETLVMVHGYGAGLGFFYKNLEPITRLPGLRLYALDMLGMGNSSRPNFKINA KDREQQVIEAEDWFVDALEEWRKERKLERFTLLGHSLGGYLAVSYALKYPGRLNKLILASPVGIPEDPYAVNASL PDPSESTIQSEFADDQKTVTAGRPAAAAVSVAPKRPLPGWLVWLWDANVSPFSIIRFSGPLGPRFVSGWSTRRFN HLPSEEAQALHDYSFSIFKQKGSGEYALGYILAPGAYARRPVINRIHHVGRQTDANGRSETGLPVVFMYGENDWM DVAAGRAAASKLDDARRRALKDASADDERREKGSARVVVVPDAGHHLYLDNPDFFNDVLRQEMEETMKQGAS* |
Coding | >Ophcf2|04053 ATGTCGACGACGACTACGGAAGGGCTGCAGCAGCAGAAGTTGCCGCAGCAGCGTCCGCCCTCGATGTATTTCCCT TTGGGTTACAAGGACGCTGCCTATCAGTGGTGGACAGGCGTCGCCCCCACGGTCGCCGAGCGCAAAGTCCTCTCC TTCGTCCCTCAACTCCGTGAAGCCGTCGACTCTCTCGCTGCTGCTGCGGCTGGAACCCGCATCTGGCGCCGGTCC CTCGTCCCGCTGAGCGGCAAGAATCGGGCCCTCAACGAGGTATGCGTCGAGAGATCGGGAGAGGCCGTGGACGAG ACGCTCGTCATGGTCCATGGTTACGGCGCCGGTCTCGGCTTCTTCTACAAGAATCTCGAACCCATCACGCGTCTC CCCGGCTTGAGGCTGTATGCGCTCGACATGCTGGGAATGGGCAACTCGTCGCGTCCCAATTTCAAGATCAACGCC AAGGATCGCGAGCAGCAGGTCATCGAGGCCGAGGACTGGTTCGTCGATGCGCTTGAGGAGTGGCGCAAGGAGCGC AAGCTGGAGCGCTTCACTCTGCTCGGTCACTCTCTCGGGGGTTACCTTGCCGTTTCTTACGCCCTCAAGTACCCC GGCCGCTTGAACAAGCTGATCCTCGCCTCTCCCGTCGGCATCCCCGAAGACCCCTACGCCGTCAACGCTTCCTTG CCCGATCCGTCCGAGTCGACGATACAGAGCGAGTTCGCAGACGATCAGAAGACCGTCACCGCCGGCCGTCCAGCC GCCGCCGCCGTCTCAGTGGCGCCGAAGCGGCCTCTTCCCGGATGGCTCGTCTGGTTATGGGATGCTAATGTTTCG CCTTTCAGCATCATCCGTTTCTCCGGTCCCCTCGGCCCGCGTTTCGTCTCTGGCTGGAGCACACGGCGCTTCAAC CACCTGCCGTCTGAAGAGGCACAGGCCTTGCATGACTACTCGTTTTCCATATTCAAGCAAAAGGGCAGCGGCGAG TACGCTCTCGGCTACATACTGGCGCCTGGCGCATACGCCCGACGGCCCGTCATCAACCGCATCCACCACGTCGGC CGGCAGACGGACGCCAACGGCCGGAGCGAGACGGGTCTCCCCGTTGTCTTCATGTACGGCGAGAATGACTGGATG GACGTGGCAGCCGGCCGCGCAGCAGCCTCTAAACTCGATGATGCTCGCAGACGTGCCCTGAAAGATGCCTCAGCT GACGACGAGCGACGCGAAAAGGGCTCGGCGCGCGTCGTGGTGGTGCCCGATGCCGGCCATCACTTGTACCTCGAC AACCCCGACTTCTTCAACGACGTTTTGCGCCAAGAGATGGAGGAGACGATGAAGCAGGGCGCTTCGTAA |
Transcript | >Ophcf2|04053 ATGTCGACGACGACTACGGAAGGGCTGCAGCAGCAGAAGTTGCCGCAGCAGCGTCCGCCCTCGATGTATTTCCCT TTGGGTTACAAGGACGCTGCCTATCAGTGGTGGACAGGCGTCGCCCCCACGGTCGCCGAGCGCAAAGTCCTCTCC TTCGTCCCTCAACTCCGTGAAGCCGTCGACTCTCTCGCTGCTGCTGCGGCTGGAACCCGCATCTGGCGCCGGTCC CTCGTCCCGCTGAGCGGCAAGAATCGGGCCCTCAACGAGGTATGCGTCGAGAGATCGGGAGAGGCCGTGGACGAG ACGCTCGTCATGGTCCATGGTTACGGCGCCGGTCTCGGCTTCTTCTACAAGAATCTCGAACCCATCACGCGTCTC CCCGGCTTGAGGCTGTATGCGCTCGACATGCTGGGAATGGGCAACTCGTCGCGTCCCAATTTCAAGATCAACGCC AAGGATCGCGAGCAGCAGGTCATCGAGGCCGAGGACTGGTTCGTCGATGCGCTTGAGGAGTGGCGCAAGGAGCGC AAGCTGGAGCGCTTCACTCTGCTCGGTCACTCTCTCGGGGGTTACCTTGCCGTTTCTTACGCCCTCAAGTACCCC GGCCGCTTGAACAAGCTGATCCTCGCCTCTCCCGTCGGCATCCCCGAAGACCCCTACGCCGTCAACGCTTCCTTG CCCGATCCGTCCGAGTCGACGATACAGAGCGAGTTCGCAGACGATCAGAAGACCGTCACCGCCGGCCGTCCAGCC GCCGCCGCCGTCTCAGTGGCGCCGAAGCGGCCTCTTCCCGGATGGCTCGTCTGGTTATGGGATGCTAATGTTTCG CCTTTCAGCATCATCCGTTTCTCCGGTCCCCTCGGCCCGCGTTTCGTCTCTGGCTGGAGCACACGGCGCTTCAAC CACCTGCCGTCTGAAGAGGCACAGGCCTTGCATGACTACTCGTTTTCCATATTCAAGCAAAAGGGCAGCGGCGAG TACGCTCTCGGCTACATACTGGCGCCTGGCGCATACGCCCGACGGCCCGTCATCAACCGCATCCACCACGTCGGC CGGCAGACGGACGCCAACGGCCGGAGCGAGACGGGTCTCCCCGTTGTCTTCATGTACGGCGAGAATGACTGGATG GACGTGGCAGCCGGCCGCGCAGCAGCCTCTAAACTCGATGATGCTCGCAGACGTGCCCTGAAAGATGCCTCAGCT GACGACGAGCGACGCGAAAAGGGCTCGGCGCGCGTCGTGGTGGTGCCCGATGCCGGCCATCACTTGTACCTCGAC AACCCCGACTTCTTCAACGACGTTTTGCGCCAAGAGATGGAGGAGACGATGAAGCAGGGCGCTTCGTAA |
Gene | >Ophcf2|04053 ATGTCGACGACGACTACGGAAGGGCTGCAGCAGCAGAAGTTGCCGCAGCAGCGTCCGCCCTCGATGTATTTCCCT TTGGGTTACAAGGACGCTGCCTATCAGTGGGTAAGTCCAAAGGGGGACTCGCGCTGGAAAAGAAAGCCGTTTGCT GACTTCTTGACAGTGGACAGGCGTCGCCCCCACGGTCGCCGAGCGCAAAGTCCTCTCCTTCGTCCCTCAACTCCG TGAAGCCGTCGACTCTCTCGCTGCTGCTGCGGCTGGAACCCGCATCTGGCGCCGGTCCCTCGTCCCGCTGAGCGG CAAGAATCGGGCCCTCAACGAGGTATGCGTCGAGAGATCGGGAGAGGCCGTGGACGAGACGCTCGTCATGGTCCA TGGTTACGGCGCCGGTCTCGGCTTCTTCTACAAGAATCTCGAACCCATCACGCGTCTCCCCGGCTTGAGGCTGTA TGCGCTCGACATGCTGGGAATGGGCAACTCGTCGCGTCCCAATTTCAAGATCAACGCCAAGGATCGCGAGCAGCA GGTCATCGAGGCCGAGGACTGGTTCGTCGATGCGCTTGAGGAGTGGCGCAAGGAGCGCAAGCTGGAGCGCTTCAC TCTGCTCGGTCACTCTCTCGGGGGTTACCTTGCCGTTTCTTACGCCCTCAAGTACCCCGGCCGCTTGAACAAGCT GATCCTCGCCTCTCCCGTCGGCATCCCCGAAGACCCCTACGCCGTCAACGCTTCCTTGCCCGATCCGTCCGAGTC GACGATACAGAGCGAGTTCGCAGACGATCAGAAGACCGTCACCGCCGGCCGTCCAGCCGCCGCCGCCGTCTCAGT GGCGCCGAAGCGGCCTCTTCCCGGATGGCTCGTCTGGTTATGGGATGCTAATGTTTCGCCTTTCAGCATCATCCG TTTCTCCGGTCCCCTCGGCCCGCGTTTCGTCTCTGGCTGGAGCACACGGCGCTTCAACCACCTGCCGTCTGAAGA GGCACAGGCCTTGCATGACTACTCGTTTTCCATATTCAAGCAAAAGGGCAGCGGCGAGTACGCTCTCGGCTACAT ACTGGCGCCTGGCGCATACGCCCGACGGCCCGTCATCAACCGCATCCACCACGTCGGCCGGCAGACGGACGCCAA CGGCCGGAGCGAGACGGGTCTCCCCGTTGTCTTCATGTACGGCGAGAATGACTGGATGGACGTGGCAGCCGGCCG CGCAGCAGCCTCTAAACTCGATGATGCTCGCAGACGTGCCCTGAAAGATGCCTCAGCTGACGACGAGCGACGCGA AAAGGGCTCGGCGCGCGTCGTGGTGGTGCCCGATGCCGGCCATCACTTGTACCTCGACAACCCCGACTTCTTCAA CGACGTTTTGCGCCAAGAGATGGAGGAGACGATGAAGCAGGGCGCTTCGTAA |