Protein ID | Ophcf2|04026 |
Gene name | |
Location | scaffold_04:663376..666127 |
Strand | + |
Gene length (bp) | 2751 |
Transcript length (bp) | 2337 |
Coding sequence length (bp) | 2337 |
Protein length (aa) | 779 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00226 | DnaJ | DnaJ domain | 1.5E-21 | 6 | 69 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 70 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|04026 MAASRDYYADLQLPPSADIQEIKKQFRKLALKYHPDRNPGREVEVNSQFQIIQSAHEVLSDPQQKAKYDASMRGG RVPGGSGVKGNPWQNAAHHFPPPPRRTSTRNPPSGAQRWQSRFSSGVPPTAKQQTASDSEAKKTAARAFESMRKP QPQTGSRNSHHDARPPPPPPPPPPMPPRTEAGKNRADASFGSRKTGFHPRSAMPGDEPPVSNQNYYSRPPAESPP PPPHPPRRPVPSPMPDPLSQFRARPQSMPYSSQGGEKTNPFEGVQPSRRSSVRETSGHDDSTCSRHEPTRPSYTQ PYEAHDADDGGPQATKRDEDTSRSRLDSRAGPGAYHEAAPVAGQPKNTEKNAKAENQSGRGPSIFRFPVGDDTFE RTQPLSQSTKSSLEDINTSFVKNDDPNAWQFNAGSTEGGSQPVSRNSTGGRTKRGTFEKNSSMPSADQHPAYQTD HQPQTEAQQGGFDADGWTDKFNAQTFVPRSQPGGTSSPTRCSRSNSKRVRTKPTAGSAAVVEEYSSEDEWYEWRG RNAQAKPPAADSPQAMDIDSPPSVPTTSQDQAAGVRNIPVEPSRPEWRPGNPAPLVADDKPERPAKVPLNAQNMG SEDSEEFRASFADLRNVAPIGQQRAGLRSLTDLKDELPFESKASDEPLVSLPQTQPLQLPSVPQAPRPPPAAAME GPKPNPLVWTKYLAEFESYLQKWDVFNGQVVDHFTTRKAHVAKTRIAKGYAFLRARGETDILEYSNWVRQDNDVR QRWGAACVEHDVRLREFMAVRDKMKALL* |
Coding | >Ophcf2|04026 ATGGCTGCCTCGAGGGATTACTATGCCGACCTGCAGCTGCCTCCGTCGGCGGACATTCAGGAGATCAAGAAGCAA TTCAGGAAACTAGCTCTCAAATATCATCCAGACCGCAACCCTGGCCGAGAGGTGGAAGTGAACTCCCAGTTCCAG ATCATCCAGTCGGCACACGAGGTGCTATCGGACCCCCAGCAGAAAGCAAAGTACGATGCCAGCATGAGAGGCGGT CGAGTCCCTGGCGGGTCTGGAGTCAAAGGAAATCCGTGGCAGAACGCTGCCCATCACTTTCCTCCGCCTCCACGT CGAACCTCGACGCGCAACCCGCCCTCAGGGGCACAGCGATGGCAGTCTCGATTCTCTAGCGGAGTTCCCCCGACT GCGAAGCAGCAGACGGCTTCCGACTCGGAGGCGAAGAAGACTGCCGCCCGCGCGTTCGAGAGCATGCGTAAGCCG CAACCTCAGACCGGCTCGAGAAATTCGCATCATGATGCCAGACCACCGCCTCCTCCGCCTCCGCCGCCACCGATG CCTCCACGGACTGAAGCCGGCAAAAACCGTGCCGACGCCTCTTTCGGGTCTCGGAAAACGGGCTTTCATCCTCGT TCTGCCATGCCGGGCGATGAGCCTCCGGTCTCGAACCAGAACTACTATTCGAGGCCTCCCGCCGAGAGTCCTCCA CCGCCACCTCATCCACCGCGGAGGCCTGTTCCATCTCCGATGCCTGATCCCTTGAGCCAGTTTCGAGCGCGTCCT CAGAGCATGCCCTACTCTTCACAGGGAGGGGAGAAGACGAACCCGTTCGAGGGAGTTCAGCCATCGCGCAGGAGC AGCGTGAGGGAAACGAGTGGGCACGACGACTCGACATGCTCACGCCACGAGCCGACCCGCCCAAGTTATACGCAA CCTTACGAAGCGCATGATGCTGACGATGGTGGACCACAAGCGACGAAACGAGACGAGGATACCTCTCGATCGCGC CTCGATTCAAGAGCAGGCCCTGGTGCCTACCATGAGGCAGCCCCGGTTGCGGGCCAACCCAAGAATACCGAGAAA AATGCCAAGGCGGAGAACCAAAGTGGCCGCGGTCCTTCCATCTTCCGGTTTCCCGTGGGCGACGATACCTTCGAA CGGACACAACCCCTGAGCCAGTCTACCAAGAGCAGCTTGGAGGATATCAACACCAGTTTTGTCAAGAACGATGAT CCCAATGCGTGGCAGTTCAACGCCGGAAGCACGGAAGGTGGCAGCCAGCCTGTCAGCCGAAACTCCACGGGCGGA CGTACCAAACGAGGCACTTTTGAAAAGAATTCGAGCATGCCCTCTGCTGATCAGCATCCTGCTTACCAGACCGAT CACCAGCCACAAACGGAGGCTCAACAGGGCGGGTTCGATGCGGACGGCTGGACGGACAAGTTCAACGCCCAGACG TTTGTGCCACGTTCTCAGCCGGGCGGCACTTCTTCGCCAACCAGGTGCAGCCGATCCAACTCTAAGAGGGTCAGG ACGAAGCCTACGGCGGGAAGCGCTGCCGTCGTCGAGGAGTACAGCAGCGAGGATGAGTGGTATGAATGGCGCGGC CGCAATGCCCAGGCAAAGCCTCCAGCGGCAGACAGCCCGCAAGCCATGGACATCGACTCCCCGCCCTCTGTCCCG ACAACGTCACAGGACCAGGCTGCTGGAGTGCGAAACATTCCCGTGGAGCCCTCGAGGCCTGAATGGCGGCCTGGC AACCCAGCACCCCTCGTGGCCGACGACAAGCCCGAGCGGCCGGCCAAGGTTCCGCTCAATGCCCAGAACATGGGA TCGGAGGACAGCGAAGAGTTCAGAGCCAGCTTTGCGGATCTGCGGAATGTGGCGCCCATCGGGCAGCAGAGGGCA GGCTTGAGGTCGCTTACGGATCTCAAAGACGAATTGCCGTTTGAGAGCAAGGCATCGGACGAGCCACTCGTCTCT CTTCCACAGACTCAGCCTCTTCAGCTCCCTTCGGTGCCTCAGGCGCCGCGTCCGCCGCCAGCAGCTGCCATGGAA GGCCCGAAACCGAACCCCTTGGTATGGACCAAGTATCTGGCCGAGTTCGAAAGCTACCTTCAAAAGTGGGACGTC TTCAACGGCCAAGTGGTAGATCACTTTACCACCCGCAAGGCTCACGTGGCCAAGACGCGGATCGCGAAAGGCTAT GCCTTTCTCAGGGCCCGTGGCGAGACGGACATTCTCGAGTACAGCAACTGGGTCCGACAGGACAACGACGTCCGA CAGCGTTGGGGGGCAGCTTGCGTTGAACATGATGTGCGGCTTCGTGAGTTCATGGCCGTCAGAGACAAGATGAAG GCACTACTCTGA |
Transcript | >Ophcf2|04026 ATGGCTGCCTCGAGGGATTACTATGCCGACCTGCAGCTGCCTCCGTCGGCGGACATTCAGGAGATCAAGAAGCAA TTCAGGAAACTAGCTCTCAAATATCATCCAGACCGCAACCCTGGCCGAGAGGTGGAAGTGAACTCCCAGTTCCAG ATCATCCAGTCGGCACACGAGGTGCTATCGGACCCCCAGCAGAAAGCAAAGTACGATGCCAGCATGAGAGGCGGT CGAGTCCCTGGCGGGTCTGGAGTCAAAGGAAATCCGTGGCAGAACGCTGCCCATCACTTTCCTCCGCCTCCACGT CGAACCTCGACGCGCAACCCGCCCTCAGGGGCACAGCGATGGCAGTCTCGATTCTCTAGCGGAGTTCCCCCGACT GCGAAGCAGCAGACGGCTTCCGACTCGGAGGCGAAGAAGACTGCCGCCCGCGCGTTCGAGAGCATGCGTAAGCCG CAACCTCAGACCGGCTCGAGAAATTCGCATCATGATGCCAGACCACCGCCTCCTCCGCCTCCGCCGCCACCGATG CCTCCACGGACTGAAGCCGGCAAAAACCGTGCCGACGCCTCTTTCGGGTCTCGGAAAACGGGCTTTCATCCTCGT TCTGCCATGCCGGGCGATGAGCCTCCGGTCTCGAACCAGAACTACTATTCGAGGCCTCCCGCCGAGAGTCCTCCA CCGCCACCTCATCCACCGCGGAGGCCTGTTCCATCTCCGATGCCTGATCCCTTGAGCCAGTTTCGAGCGCGTCCT CAGAGCATGCCCTACTCTTCACAGGGAGGGGAGAAGACGAACCCGTTCGAGGGAGTTCAGCCATCGCGCAGGAGC AGCGTGAGGGAAACGAGTGGGCACGACGACTCGACATGCTCACGCCACGAGCCGACCCGCCCAAGTTATACGCAA CCTTACGAAGCGCATGATGCTGACGATGGTGGACCACAAGCGACGAAACGAGACGAGGATACCTCTCGATCGCGC CTCGATTCAAGAGCAGGCCCTGGTGCCTACCATGAGGCAGCCCCGGTTGCGGGCCAACCCAAGAATACCGAGAAA AATGCCAAGGCGGAGAACCAAAGTGGCCGCGGTCCTTCCATCTTCCGGTTTCCCGTGGGCGACGATACCTTCGAA CGGACACAACCCCTGAGCCAGTCTACCAAGAGCAGCTTGGAGGATATCAACACCAGTTTTGTCAAGAACGATGAT CCCAATGCGTGGCAGTTCAACGCCGGAAGCACGGAAGGTGGCAGCCAGCCTGTCAGCCGAAACTCCACGGGCGGA CGTACCAAACGAGGCACTTTTGAAAAGAATTCGAGCATGCCCTCTGCTGATCAGCATCCTGCTTACCAGACCGAT CACCAGCCACAAACGGAGGCTCAACAGGGCGGGTTCGATGCGGACGGCTGGACGGACAAGTTCAACGCCCAGACG TTTGTGCCACGTTCTCAGCCGGGCGGCACTTCTTCGCCAACCAGGTGCAGCCGATCCAACTCTAAGAGGGTCAGG ACGAAGCCTACGGCGGGAAGCGCTGCCGTCGTCGAGGAGTACAGCAGCGAGGATGAGTGGTATGAATGGCGCGGC CGCAATGCCCAGGCAAAGCCTCCAGCGGCAGACAGCCCGCAAGCCATGGACATCGACTCCCCGCCCTCTGTCCCG ACAACGTCACAGGACCAGGCTGCTGGAGTGCGAAACATTCCCGTGGAGCCCTCGAGGCCTGAATGGCGGCCTGGC AACCCAGCACCCCTCGTGGCCGACGACAAGCCCGAGCGGCCGGCCAAGGTTCCGCTCAATGCCCAGAACATGGGA TCGGAGGACAGCGAAGAGTTCAGAGCCAGCTTTGCGGATCTGCGGAATGTGGCGCCCATCGGGCAGCAGAGGGCA GGCTTGAGGTCGCTTACGGATCTCAAAGACGAATTGCCGTTTGAGAGCAAGGCATCGGACGAGCCACTCGTCTCT CTTCCACAGACTCAGCCTCTTCAGCTCCCTTCGGTGCCTCAGGCGCCGCGTCCGCCGCCAGCAGCTGCCATGGAA GGCCCGAAACCGAACCCCTTGGTATGGACCAAGTATCTGGCCGAGTTCGAAAGCTACCTTCAAAAGTGGGACGTC TTCAACGGCCAAGTGGTAGATCACTTTACCACCCGCAAGGCTCACGTGGCCAAGACGCGGATCGCGAAAGGCTAT GCCTTTCTCAGGGCCCGTGGCGAGACGGACATTCTCGAGTACAGCAACTGGGTCCGACAGGACAACGACGTCCGA CAGCGTTGGGGGGCAGCTTGCGTTGAACATGATGTGCGGCTTCGTGAGTTCATGGCCGTCAGAGACAAGATGAAG GCACTACTCTGA |
Gene | >Ophcf2|04026 ATGGCTGCCTCGAGGGATTACTATGCCGACCTGCAGCTGCCTCCGTCGGCGGACATTCAGGAGATCAAGAAGCAA TTCAGGAAACTAGGTAATCAAGGGCTTGCTTTGCTTGGCGGGAGACCTCTTTGCTAACGCGCTTTAGCTCTCAAA TATCATCCAGACCGCAACCCTGGCCGAGAGGTGGAAGTGAACTCCCAGTTCCAGATCATCCAGTCGGCACACGAG GTGCTATCGGACCCCCAGCAGAAAGCAAAGTACGATGCCAGCATGAGAGGCGGTCGAGTCCCTGGCGGGTCTGGA GTCAAAGGAAATCCGTGGCAGAACGCTGCCCATCACTTTCCTCCGCCTCCACGTCGAACCTCGACGCGCAACCCG CCCTCAGGGGCACAGCGATGGCAGTCTCGATTCTCTAGCGGAGTTCCCCCGACTGCGAAGCAGCAGACGGCTTCC GACTCGGAGGCGAAGAAGACTGCCGCCCGCGCGTTCGAGAGCATGCGTAAGCCGCAACCTCAGACCGGCTCGAGA AATTCGCATCATGATGCCAGACCACCGCCTCCTCCGCCTCCGCCGCCACCGATGCCTCCACGGACTGAAGCCGGC AAAAACCGTGCCGACGCCTCTTTCGGGTCTCGGAAAACGGGCTTTCATCCTCGTTCTGCCATGCCGGGCGATGAG CCTCCGGTCTCGAACCAGAACTACTATTCGAGGCCTCCCGCCGAGAGTCCTCCACCGCCACCTCATCCACCGCGG AGGCCTGTTCCATCTCCGATGCCTGATCCCTTGAGCCAGTTTCGAGCGCGTCCTCAGAGCATGCCCTACTCTTCA CAGGGAGGGGAGAAGACGAACCCGTTCGAGGGAGTTCAGCCATCGCGCAGGAGCAGCGTGAGGGAAACGAGTGGG CACGACGACTCGACATGCTCACGCCACGAGCCGACCCGCCCAAGTTATACGCAACCTTACGAAGCGCATGATGCT GACGATGGTGGACCACAAGCGACGAAACGAGACGAGGATACCTCTCGATCGCGCCTCGATTCAAGAGCAGGCCCT GGTGCCTACCATGAGGCAGCCCCGGTTGCGGGCCAACCCAAGAATACCGAGAAAAGTAAGCAATCTCCCTAACTT GAGGATATGCCAGATCTAACTTGCTTCGCAGATGCCAAGGCGGAGAACCAAAGTGGCCGCGGTCCTTCCATGTAT GCCCCTCCTCATCATGAGCAAATTCCCCAGCGTCCAGTCTTTGCTAGTGGAACTTCCTTGAAGCCCCAAAGCGTT GGATCCGGATACGGGCAAATCCCGGTTCGCAAGATGAAACTGGCTTCCAGTGGATGCCAGGTTTCTTTCCAAACA CAAACTGCTTTCGAGAAACAACAGTTCCTATTTCTGCATCATTTGATCAGCAATATGGAGGCTGGAGTTCAACCC GATAAGCATGAAGCCCGGCGAGAGAACGTTCCGCATGGCTGCCGTGTAACAGATTACGCTGACTCTTCTGGTGCT ACTAGCTTCCGGTTTCCCGTGGGCGACGATACCTTCGAACGGACACAACCCCTGAGCCAGTCTACCAAGAGCAGC TTGGAGGATATCAACACCAGTTTTGTCAAGAACGATGATCCCAATGCGTGGCAGTTCAACGCCGGAAGCACGGAA GGTGGCAGCCAGCCTGTCAGCCGAAACTCCACGGGCGGACGTACCAAACGAGGCACTTTTGAAAAGAATTCGAGC ATGCCCTCTGCTGATCAGCATCCTGCTTACCAGACCGATCACCAGCCACAAACGGAGGCTCAACAGGGCGGGTTC GATGCGGACGGCTGGACGGACAAGTTCAACGCCCAGACGTTTGTGCCACGTTCTCAGCCGGGCGGCACTTCTTCG CCAACCAGGTGCAGCCGATCCAACTCTAAGAGGGTCAGGACGAAGCCTACGGCGGGAAGCGCTGCCGTCGTCGAG GAGTACAGCAGCGAGGATGAGTGGTATGAATGGCGCGGCCGCAATGCCCAGGCAAAGCCTCCAGCGGCAGACAGC CCGCAAGCCATGGACATCGACTCCCCGCCCTCTGTCCCGACAACGTCACAGGACCAGGCTGCTGGAGTGCGAAAC ATTCCCGTGGAGCCCTCGAGGCCTGAATGGCGGCCTGGCAACCCAGCACCCCTCGTGGCCGACGACAAGCCCGAG CGGCCGGCCAAGGTTCCGCTCAATGCCCAGAACATGGGATCGGAGGACAGCGAAGAGTTCAGAGCCAGCTTTGCG GATCTGCGGAATGTGGCGCCCATCGGGCAGCAGAGGGCAGGCTTGAGGTCGCTTACGGATCTCAAAGACGAATTG CCGTTTGAGAGCAAGGCATCGGACGAGCCACTCGTCTCTCTTCCACAGACTCAGCCTCTTCAGCTCCCTTCGGTG CCTCAGGCGCCGCGTCCGCCGCCAGCAGCTGCCATGGAAGGCCCGAAACCGAACCCCTTGGTATGGACCAAGTAT CTGGCCGAGTTCGAAAGCTACCTTCAAAAGTGGGACGTCTTCAACGGCCAAGTGGTAGATCACTTTACCACCCGC AAGGCTCACGTGGCCAAGACGCGGATCGCGAAAGGCTATGCCTTTCTCAGGGCCCGTGGCGAGACGGACATTCTC GAGTACAGCAACTGGGTCCGACAGGACAACGACGTCCGACAGCGTTGGGGGGCAGCTTGCGTTGAACATGATGTG CGGCTTCGTGAGTTCATGGCCGTCAGAGACAAGATGAAGGCACTACTCTGA |