Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04025
Gene name
Locationscaffold_04:661872..663190
Strand+
Gene length (bp)1318
Transcript length (bp)699
Coding sequence length (bp)699
Protein length (aa) 233

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02845 CUE CUE domain 4.8E-10 47 87

GO

GO Term Description Terminal node
GO:0043130 ubiquitin binding Yes
GO:0032182 ubiquitin-like protein binding No
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0005515 protein binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04025
MANDQISLPYLVAILLLSGLIIRYLFFSGPPVRRLATTSPEAVLRSREAAVQRIQQMFPQTERRSILWDLQRNGG
SIQSTTERILAGRLDTPPVSFQPPPAPVQATTSSSAESSTRPSEKATQPDLITRYNLKGKLNVPAEEEESKPLKG
WSSSRDERQLMLQRRRDEMILAARRKMEAKMAAEKTAMFGFRLGFTWLESGQGDVRLLVLLVCWALLLFRRVAAV
CKRRERL*
Coding >Ophcf2|04025
ATGGCCAACGACCAGATATCGCTGCCGTACCTGGTGGCCATCCTACTGCTGTCGGGACTCATCATTCGCTATCTC
TTCTTCTCGGGTCCGCCGGTGAGGAGACTCGCGACGACATCGCCCGAGGCCGTACTGCGATCGCGAGAGGCGGCA
GTGCAGAGAATCCAGCAGATGTTCCCGCAGACGGAGCGGAGAAGCATCCTGTGGGACCTACAGCGGAACGGCGGG
AGCATCCAGAGCACGACGGAGCGCATCCTCGCTGGCCGTCTGGACACGCCGCCCGTCTCGTTTCAGCCGCCACCA
GCGCCGGTTCAAGCGACGACCAGTTCGAGCGCTGAGTCGTCAACACGACCGTCGGAGAAGGCGACGCAGCCGGAT
CTGATTACGCGCTACAATCTCAAGGGGAAGTTGAATGTGCCGGCCGAGGAGGAGGAGAGCAAGCCCTTGAAGGGC
TGGAGCTCGAGTCGGGACGAGCGTCAGCTGATGCTACAGCGGCGGAGGGACGAGATGATCTTGGCGGCGCGGCGC
AAGATGGAAGCCAAGATGGCAGCGGAGAAGACTGCCATGTTCGGGTTTCGTCTTGGATTTACGTGGCTCGAGTCA
GGCCAAGGGGATGTCCGTCTTTTGGTCCTTCTGGTCTGCTGGGCTTTACTTTTGTTCCGACGGGTGGCGGCCGTT
TGCAAGCGCAGGGAAAGGCTCTGA
Transcript >Ophcf2|04025
ATGGCCAACGACCAGATATCGCTGCCGTACCTGGTGGCCATCCTACTGCTGTCGGGACTCATCATTCGCTATCTC
TTCTTCTCGGGTCCGCCGGTGAGGAGACTCGCGACGACATCGCCCGAGGCCGTACTGCGATCGCGAGAGGCGGCA
GTGCAGAGAATCCAGCAGATGTTCCCGCAGACGGAGCGGAGAAGCATCCTGTGGGACCTACAGCGGAACGGCGGG
AGCATCCAGAGCACGACGGAGCGCATCCTCGCTGGCCGTCTGGACACGCCGCCCGTCTCGTTTCAGCCGCCACCA
GCGCCGGTTCAAGCGACGACCAGTTCGAGCGCTGAGTCGTCAACACGACCGTCGGAGAAGGCGACGCAGCCGGAT
CTGATTACGCGCTACAATCTCAAGGGGAAGTTGAATGTGCCGGCCGAGGAGGAGGAGAGCAAGCCCTTGAAGGGC
TGGAGCTCGAGTCGGGACGAGCGTCAGCTGATGCTACAGCGGCGGAGGGACGAGATGATCTTGGCGGCGCGGCGC
AAGATGGAAGCCAAGATGGCAGCGGAGAAGACTGCCATGTTCGGGTTTCGTCTTGGATTTACGTGGCTCGAGTCA
GGCCAAGGGGATGTCCGTCTTTTGGTCCTTCTGGTCTGCTGGGCTTTACTTTTGTTCCGACGGGTGGCGGCCGTT
TGCAAGCGCAGGGAAAGGCTCTGA
Gene >Ophcf2|04025
ATGGCCAACGACCAGATATCGCTGCCGTACCTGGTGGCCATCCTACTGCTGTCGGGACTCATCATTCGCTATCTC
TTCTTCTCGGGTCCGCCGGTGAGGAGACTCGCGACGACATCGCCCGAGGCCGTACTGCGATCGCGAGAGGCGGCA
GTGCAGAGAATCCAGCAGATGTTCCCGCAGACGGAGCGGAGAAGCATCCTGTGGGACCTACAGCGGAACGGCGGG
AGCATCCAGAGCACGACGGAGCGCATCCTCGCTGGCCGTCTGGACACGGTGAGAGGCTTGCTTAGGGCCGAGAAA
CCCCCTGATGACGATGGACTGACTCTTGGATGCGATTAGCCGCCCGTCTCGTTTCAGCCGCCACCAGCGCCGGTT
CAAGCGACGACCAGTTCGAGCGCTGAGTCGTCAACACGACCGTCGGAGAAGGCGACGCAGCCGGATCTGATTACG
CGCTACAATCTCAAGGGGAAGTTGAATGTGCCGGCCGAGGAGGAGGAGAGCAAGCCCTTGAAGGGCTGGAGCTCG
AGTCGGGACGAGCGTCAGCTGATGCTACAGCGGCGGAGGGACGAGATGATCTTGGCGGCGCGGCGCAAGATGGAA
GCCAAGATGGCAGCGGAGAAGACTGTGCGTGGTAGCTGATGGGGGCTAGGCTGAGGGCATCAGCGGCTTCATGGC
TTCTCTATTTGTGAAGGGGGCGAATGTGTAGTGCGCTTTGTTGAATTTACAGCGTTGCGTTGGCGCTTGGATAGG
GATGGAAGGATGGAGGTTGAGCAAGAGACGGGGTTCGAGCATCAGACAGCAGCAAGTCGCACACGCTACTCACTT
TTGGATCGGACTATTGAATGGAGAGTCGATGATGGTCAGGCCATGTTCGGGTTTCGTCTTGGATTTACGTGGCTC
GAGTCAGGCCAAGGGGATGTCGTGAGTTGACAACAGCTCCCCAGCCACACGCACAGCCCCAATCGTCGTCACCGC
GGGGCTCCCCAGCCACCAGCCACCAGCGAGCCAGCCAGGCTTCATCAACCAACCTCGTCACCCTGAGCTGACTGC
ACACGCGCCTGATTTTTTTTTTTTTTGGCTCGCTCCTGAGAAGGCCTTGTTTTTGGGAAGCCTGCGATTTTTCCG
TGCCTCTGGTTCTGCCACCGCGGCGACGCCATACGACGATAAGCGTCTTTTGGTCCTTCTGGTCTGCTGGGCTTT
ACTTTTGTTCCGACGGGTGGCGGCCGTTTGCAAGCGCAGGGAAAGGTATGTTTTTTTTCCTCCTTGCTGCGGCGA
CTTTGGTCTCCTTTTTGCTGACCCTTCTCACGTCAGGCTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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