Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03993
Gene name
Locationscaffold_04:571679..572910
Strand-
Gene length (bp)1231
Transcript length (bp)1080
Coding sequence length (bp)1080
Protein length (aa) 360

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 39 0.45

Transmembrane Domains

Domain # Start End Length
1 271 293 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03993
MLEYFTYKKVKKHKAEKKAEESASKRPVSPIDTNADEDAPVPPPTQTSAAELDWQSSDTEAATTRLKKTKTTTED
AAAGSSTAIAPASHKQPGRLALLFTRHRKTESGLQPRQGVVSPDEGERETKDISSLLDRLNLSARNNKVVTTDSS
TLLQSFTQVFKDLVNGVPTAVDDLQKLVEDRDGTISRGFDKLPSSLKKLVVQLPDKITNSLGPEILAAAAASQGI
KTDSGGGIKGVAKKILVPHNLAELVTKPGAIVGMLRAIVEVLKTRWPAFIGMNVIWSVALTLLLFVLWYCHKRGR
EERLERERTAQAIDGADRIEELSDDPALPAPEYEARDGLSVSSSSVPLRKPVPAENRDA*
Coding >Ophcf2|03993
ATGCTCGAGTACTTTACCTACAAAAAGGTCAAGAAGCACAAGGCAGAGAAGAAAGCCGAAGAGTCGGCCAGCAAA
CGCCCAGTCTCACCCATAGACACAAACGCCGACGAAGACGCACCCGTCCCCCCCCCCACCCAAACCTCGGCCGCC
GAACTCGACTGGCAATCCTCCGACACCGAAGCAGCAACAACACGCCTCAAAAAGACAAAGACCACGACCGAAGAT
GCCGCAGCCGGCTCCTCAACAGCCATCGCACCCGCCTCGCACAAACAACCAGGCCGGCTGGCCCTGCTCTTCACC
CGACACCGGAAGACGGAGTCCGGGTTGCAGCCTCGGCAGGGTGTCGTGTCGCCGGATGAGGGCGAGCGTGAGACT
AAGGATATAAGTAGCTTGCTCGATCGGCTCAACCTCAGCGCGCGGAATAACAAGGTTGTGACGACGGATTCGTCG
ACTTTGCTGCAGAGCTTTACGCAGGTTTTTAAGGATCTCGTCAATGGTGTGCCGACAGCGGTAGACGATTTGCAG
AAGCTGGTTGAGGATCGAGATGGCACCATCTCCCGTGGCTTCGATAAGCTCCCCTCTTCGCTCAAGAAGCTCGTC
GTTCAGCTTCCCGACAAGATCACCAATAGTCTCGGACCCGAGATCCTTGCTGCCGCCGCCGCCAGCCAGGGCATC
AAGACGGATTCGGGAGGAGGTATCAAGGGCGTGGCCAAGAAGATCCTTGTTCCGCATAATCTCGCCGAGCTGGTG
ACCAAGCCAGGGGCTATCGTCGGGATGCTGAGGGCTATTGTCGAGGTGCTTAAGACGCGCTGGCCGGCTTTCATT
GGCATGAACGTCATCTGGAGCGTTGCCCTGACTCTCCTACTCTTCGTTCTATGGTACTGTCACAAACGCGGCCGC
GAAGAACGCCTCGAGCGCGAACGAACCGCCCAAGCCATCGACGGCGCAGATCGCATCGAAGAACTCTCGGACGAT
CCCGCTCTACCAGCGCCCGAATACGAAGCGCGAGATGGCCTCTCGGTGTCATCGTCGTCTGTGCCGTTGCGGAAG
CCGGTGCCTGCTGAGAATCGCGATGCTTGA
Transcript >Ophcf2|03993
ATGCTCGAGTACTTTACCTACAAAAAGGTCAAGAAGCACAAGGCAGAGAAGAAAGCCGAAGAGTCGGCCAGCAAA
CGCCCAGTCTCACCCATAGACACAAACGCCGACGAAGACGCACCCGTCCCCCCCCCCACCCAAACCTCGGCCGCC
GAACTCGACTGGCAATCCTCCGACACCGAAGCAGCAACAACACGCCTCAAAAAGACAAAGACCACGACCGAAGAT
GCCGCAGCCGGCTCCTCAACAGCCATCGCACCCGCCTCGCACAAACAACCAGGCCGGCTGGCCCTGCTCTTCACC
CGACACCGGAAGACGGAGTCCGGGTTGCAGCCTCGGCAGGGTGTCGTGTCGCCGGATGAGGGCGAGCGTGAGACT
AAGGATATAAGTAGCTTGCTCGATCGGCTCAACCTCAGCGCGCGGAATAACAAGGTTGTGACGACGGATTCGTCG
ACTTTGCTGCAGAGCTTTACGCAGGTTTTTAAGGATCTCGTCAATGGTGTGCCGACAGCGGTAGACGATTTGCAG
AAGCTGGTTGAGGATCGAGATGGCACCATCTCCCGTGGCTTCGATAAGCTCCCCTCTTCGCTCAAGAAGCTCGTC
GTTCAGCTTCCCGACAAGATCACCAATAGTCTCGGACCCGAGATCCTTGCTGCCGCCGCCGCCAGCCAGGGCATC
AAGACGGATTCGGGAGGAGGTATCAAGGGCGTGGCCAAGAAGATCCTTGTTCCGCATAATCTCGCCGAGCTGGTG
ACCAAGCCAGGGGCTATCGTCGGGATGCTGAGGGCTATTGTCGAGGTGCTTAAGACGCGCTGGCCGGCTTTCATT
GGCATGAACGTCATCTGGAGCGTTGCCCTGACTCTCCTACTCTTCGTTCTATGGTACTGTCACAAACGCGGCCGC
GAAGAACGCCTCGAGCGCGAACGAACCGCCCAAGCCATCGACGGCGCAGATCGCATCGAAGAACTCTCGGACGAT
CCCGCTCTACCAGCGCCCGAATACGAAGCGCGAGATGGCCTCTCGGTGTCATCGTCGTCTGTGCCGTTGCGGAAG
CCGGTGCCTGCTGAGAATCGCGATGCTTGA
Gene >Ophcf2|03993
ATGCTCGAGTACTTTACCTACAAAAAGGTCAAGAAGCACAAGGCAGAGAAGAAAGCCGAAGAGTCGGCCAGCAAA
CGCCCAGTCTCACCCATAGACACAAACGCCGACGAAGACGCAGTCCTCCTCCGTCCCGACGACGAATCCTTCATA
AAAGACCTCCTCTCCAACGACACCAGCCCATCAGCCCGTCCCCCCCCCCACCCAAACCTCGGCCGCCGAACTCGA
CTGGCAATCCTCCGACACCGAAGCAGCAACAACACGCCTCAAAAAGACAAAGACCACGACCGAAGATGCCGCAGC
CGGCTCCTCAACAGCCATCGCACCCGCCTCGCACAAACAACCAGGCCGGCTGGCCCTGCTCTTCACCCGACACCG
GAAGACGGAGTCCGGGTTGCAGCCTCGGCAGGGTGTCGTGTCGCCGGATGAGGGCGAGCGTGAGACTAAGGATAT
AAGTAGCTTGCTCGATCGGCTCAACCTCAGCGCGCGGAATAACAAGGTTGTGACGACGGATTCGTCGACTTTGCT
GCAGAGCTTTACGCAGGTTTTTAAGGATCTCGTCAATGGTGTGCCGACAGCGGTAGACGATTTGCAGAAGCTGGT
TGAGGATCGAGATGGCACCATCTCCCGTGGCTTCGATAAGCTCCCCTCTTCGCTCAAGAAGCTCGTCGTTCAGCT
TCCCGACAAGATCACCAATAGTCTCGGACCCGAGATCCTTGCTGCCGCCGCCGCCAGCCAGGGCATCAAGACGGA
TTCGGGAGGAGGTATCAAGGGCGTGGCCAAGAAGATCCTTGTTCCGCATAATCTCGCCGAGCTGGTGACCAAGCC
AGGGGCTATCGTCGGGATGCTGAGGGCTATTGTCGAGGTGCTTAAGACGCGCTGGCCGGCTTTCATTGGCATGAA
CGTCATCTGGAGCGTTGCCCTGACTCGTGAGTCTCCCCTCTACTACCTCTACTTCAAGCGACCTTTCCCATCATC
TCTTCTCAACCATATGCTAACTTCTCCACCCTCAGTCCTACTCTTCGTTCTATGGTACTGTCACAAACGCGGCCG
CGAAGAACGCCTCGAGCGCGAACGAACCGCCCAAGCCATCGACGGCGCAGATCGCATCGAAGAACTCTCGGACGA
TCCCGCTCTACCAGCGCCCGAATACGAAGCGCGAGATGGCCTCTCGGTGTCATCGTCGTCTGTGCCGTTGCGGAA
GCCGGTGCCTGCTGAGAATCGCGATGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail