© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|03989 |
| Gene name | |
| Location | scaffold_04:563738..565409 |
| Strand | - |
| Gene length (bp) | 1671 |
| Transcript length (bp) | 1533 |
| Coding sequence length (bp) | 1533 |
| Protein length (aa) | 511 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 5.0E-25 | 61 | 423 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 42 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 114 | 136 | 22 |
| 2 | 151 | 173 | 22 |
| 3 | 186 | 208 | 22 |
| 4 | 213 | 235 | 22 |
| 5 | 279 | 301 | 22 |
| 6 | 311 | 333 | 22 |
| 7 | 346 | 368 | 22 |
| 8 | 372 | 394 | 22 |
| 9 | 407 | 429 | 22 |
| 10 | 434 | 456 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|03989 MAAVVNSRTASPSFARTGGELDFDSASESEIEIPSHDAIYTPQQEKQVLDLLDRKLVLFIGLLYMLSFLDRSNIG NARIAGMEADLQTSPPLSTWYDWCLTSFYATYMASAWLALIWRLVPAHVLVTVVVLAWGVAASVQAVVPSYPYLV ALRALLAVGEAGFTGVPLYLSWFYKREELALRTGYFISAAPLASSFASALAWLILRFASLSPIAPWRLLFLAEGI PSVLASVSAWTRIPDSARKAPFLTARQRRIAHLRLPPDTPPPTRQTNVLVDPIAWTAATMLLLANMAYASLPVFL PLLVEDMGHGPVAAQALSAPPFLVSFIAVLVTARFSDRIRDRTAPLVAHAVASAGGYALLAAAPLIHLPPLLRYL ALFPAAAGFFCVVTLIITWNINNQPGRHRQGLAFALMQFVGQCGPLIGTRLYPARHAPFYTPGMLVCACAMGVVA VLGLVLRRLLRSHNRNMDRADDEKLTEERERLVGEGETMASTASKSGSTTDTTARFRYML* |
| Coding | >Ophcf2|03989 ATGGCGGCGGTGGTGAATTCGCGGACGGCGAGCCCTTCGTTTGCGCGGACGGGTGGTGAGCTGGACTTTGACTCG GCTTCTGAGTCGGAGATTGAGATTCCCAGCCACGATGCCATCTATACGCCTCAGCAGGAGAAGCAGGTCCTCGAC CTCCTCGACCGCAAACTCGTCCTCTTCATCGGCCTCCTCTACATGCTCAGCTTCCTCGACCGCTCCAACATAGGC AACGCCCGCATAGCCGGCATGGAAGCCGATCTCCAAACCTCCCCCCCGCTCTCGACCTGGTACGACTGGTGTCTG ACCTCGTTCTACGCAACGTACATGGCCAGCGCCTGGCTCGCCCTCATCTGGCGCCTCGTTCCCGCGCACGTGCTC GTCACCGTGGTTGTGCTGGCGTGGGGGGTGGCTGCTTCGGTGCAGGCTGTTGTGCCGTCGTACCCGTATCTTGTT GCCTTGCGTGCTTTGCTGGCTGTTGGGGAGGCGGGATTTACGGGCGTGCCGCTGTATCTCTCTTGGTTTTATAAG AGGGAAGAGTTGGCTTTGCGGACTGGATACTTTATCTCTGCCGCGCCTCTGGCCTCGAGCTTCGCCTCAGCCCTC GCCTGGCTAATCCTCCGCTTCGCATCCCTCAGCCCCATCGCCCCCTGGCGCCTCCTCTTCCTAGCAGAAGGCATC CCCTCAGTCCTCGCCTCCGTCTCGGCCTGGACCAGGATCCCAGACTCGGCCCGAAAAGCCCCCTTCCTAACGGCC CGTCAACGGCGCATCGCCCACCTCCGTCTCCCCCCCGACACGCCGCCTCCGACACGACAGACCAACGTGCTGGTA GATCCCATCGCCTGGACGGCCGCCACGATGCTCCTCCTCGCAAACATGGCCTACGCTTCTCTGCCCGTCTTTCTC CCCCTCCTTGTCGAGGACATGGGTCACGGCCCTGTTGCCGCTCAAGCGCTCTCGGCGCCTCCTTTTCTCGTTTCC TTCATTGCCGTTCTCGTCACTGCCCGTTTCTCGGACCGGATTCGAGACCGGACGGCTCCGCTTGTTGCTCACGCT GTGGCTTCGGCTGGGGGCTATGCTCTCCTCGCTGCCGCGCCGCTGATTCATCTCCCGCCGTTGCTGCGTTATCTC GCCCTCTTTCCCGCTGCTGCTGGCTTCTTCTGCGTCGTCACCCTCATCATCACCTGGAACATCAATAACCAGCCC GGACGACATCGTCAGGGCCTCGCCTTTGCCCTCATGCAGTTCGTCGGTCAGTGCGGGCCTCTTATAGGCACTCGT CTCTATCCCGCCCGTCACGCCCCCTTTTACACGCCCGGCATGTTGGTTTGTGCCTGTGCCATGGGTGTCGTCGCC GTATTGGGTCTGGTCTTGCGTCGTCTACTGCGCAGTCACAACCGGAACATGGATAGAGCCGATGACGAGAAGCTC ACTGAAGAACGGGAGCGGCTGGTCGGCGAGGGGGAGACCATGGCGTCTACGGCGTCCAAGTCTGGGAGCACCACT GACACGACAGCCAGGTTCCGGTACATGTTGTAG |
| Transcript | >Ophcf2|03989 ATGGCGGCGGTGGTGAATTCGCGGACGGCGAGCCCTTCGTTTGCGCGGACGGGTGGTGAGCTGGACTTTGACTCG GCTTCTGAGTCGGAGATTGAGATTCCCAGCCACGATGCCATCTATACGCCTCAGCAGGAGAAGCAGGTCCTCGAC CTCCTCGACCGCAAACTCGTCCTCTTCATCGGCCTCCTCTACATGCTCAGCTTCCTCGACCGCTCCAACATAGGC AACGCCCGCATAGCCGGCATGGAAGCCGATCTCCAAACCTCCCCCCCGCTCTCGACCTGGTACGACTGGTGTCTG ACCTCGTTCTACGCAACGTACATGGCCAGCGCCTGGCTCGCCCTCATCTGGCGCCTCGTTCCCGCGCACGTGCTC GTCACCGTGGTTGTGCTGGCGTGGGGGGTGGCTGCTTCGGTGCAGGCTGTTGTGCCGTCGTACCCGTATCTTGTT GCCTTGCGTGCTTTGCTGGCTGTTGGGGAGGCGGGATTTACGGGCGTGCCGCTGTATCTCTCTTGGTTTTATAAG AGGGAAGAGTTGGCTTTGCGGACTGGATACTTTATCTCTGCCGCGCCTCTGGCCTCGAGCTTCGCCTCAGCCCTC GCCTGGCTAATCCTCCGCTTCGCATCCCTCAGCCCCATCGCCCCCTGGCGCCTCCTCTTCCTAGCAGAAGGCATC CCCTCAGTCCTCGCCTCCGTCTCGGCCTGGACCAGGATCCCAGACTCGGCCCGAAAAGCCCCCTTCCTAACGGCC CGTCAACGGCGCATCGCCCACCTCCGTCTCCCCCCCGACACGCCGCCTCCGACACGACAGACCAACGTGCTGGTA GATCCCATCGCCTGGACGGCCGCCACGATGCTCCTCCTCGCAAACATGGCCTACGCTTCTCTGCCCGTCTTTCTC CCCCTCCTTGTCGAGGACATGGGTCACGGCCCTGTTGCCGCTCAAGCGCTCTCGGCGCCTCCTTTTCTCGTTTCC TTCATTGCCGTTCTCGTCACTGCCCGTTTCTCGGACCGGATTCGAGACCGGACGGCTCCGCTTGTTGCTCACGCT GTGGCTTCGGCTGGGGGCTATGCTCTCCTCGCTGCCGCGCCGCTGATTCATCTCCCGCCGTTGCTGCGTTATCTC GCCCTCTTTCCCGCTGCTGCTGGCTTCTTCTGCGTCGTCACCCTCATCATCACCTGGAACATCAATAACCAGCCC GGACGACATCGTCAGGGCCTCGCCTTTGCCCTCATGCAGTTCGTCGGTCAGTGCGGGCCTCTTATAGGCACTCGT CTCTATCCCGCCCGTCACGCCCCCTTTTACACGCCCGGCATGTTGGTTTGTGCCTGTGCCATGGGTGTCGTCGCC GTATTGGGTCTGGTCTTGCGTCGTCTACTGCGCAGTCACAACCGGAACATGGATAGAGCCGATGACGAGAAGCTC ACTGAAGAACGGGAGCGGCTGGTCGGCGAGGGGGAGACCATGGCGTCTACGGCGTCCAAGTCTGGGAGCACCACT GACACGACAGCCAGGTTCCGGTACATGTTGTAG |
| Gene | >Ophcf2|03989 ATGGCGGCGGTGGTGAATTCGCGGACGGCGAGCCCTTCGTTTGCGCGGACGGGTGGTGAGCTGGACTTTGACTCG GCTTCTGAGTCGGAGATTGAGATTCCCAGCCACGATGCCATCTATACGCCTCAGCAGGAGAAGCAGGTCCTCGAC CTCCTCGACCGCAAACTCGTCCTCTTCATCGGCCTCCTCTACATGCTCAGCTTCCTCGACCGCTCCAGTAAGCCC CAAATCCGGCTTCCACTCCCCCATCGAAGGGTCCCTCTAACACAACGACCCCCGAACCCCAAGACATAGGCAACG CCCGCATAGCCGGCATGGAAGCCGATCTCCAAACCTCCCCCCCGCTCTCGACCTGGTACGACTGGTGTCTGACCT CGTTCTACGCAACGTACATGGCCAGCGCCTGGCTCGCCCTCATCTGGCGCCTCGTTCCCGCGCACGTGCTCGTCA CCGTGGTTGTGCTGGCGTGGGGGGTGGCTGCTTCGGTGCAGGCTGTTGTGCCGTCGTACCCGTATCTTGTTGCCT TGCGTGCTTTGCTGGCTGTTGGGGAGGCGGGATTTACGGGCGTGCCGCTGTATCTCTCTTGGTTTTATAAGAGGG AAGAGTTGGCTTTGCGGACTGGATACTTTATCTCTGGTGAGTTGATCCGGAACAAACAAGAGAGAGAGAGAGAGA GAGAGAGAGAGAAACTGACGATATAAAGCCGCGCCTCTGGCCTCGAGCTTCGCCTCAGCCCTCGCCTGGCTAATC CTCCGCTTCGCATCCCTCAGCCCCATCGCCCCCTGGCGCCTCCTCTTCCTAGCAGAAGGCATCCCCTCAGTCCTC GCCTCCGTCTCGGCCTGGACCAGGATCCCAGACTCGGCCCGAAAAGCCCCCTTCCTAACGGCCCGTCAACGGCGC ATCGCCCACCTCCGTCTCCCCCCCGACACGCCGCCTCCGACACGACAGACCAACGTGCTGGTAGATCCCATCGCC TGGACGGCCGCCACGATGCTCCTCCTCGCAAACATGGCCTACGCTTCTCTGCCCGTCTTTCTCCCCCTCCTTGTC GAGGACATGGGTCACGGCCCTGTTGCCGCTCAAGCGCTCTCGGCGCCTCCTTTTCTCGTTTCCTTCATTGCCGTT CTCGTCACTGCCCGTTTCTCGGACCGGATTCGAGACCGGACGGCTCCGCTTGTTGCTCACGCTGTGGCTTCGGCT GGGGGCTATGCTCTCCTCGCTGCCGCGCCGCTGATTCATCTCCCGCCGTTGCTGCGTTATCTCGCCCTCTTTCCC GCTGCTGCTGGCTTCTTCTGCGTCGTCACCCTCATCATCACCTGGAACATCAATAACCAGCCCGGACGACATCGT CAGGGCCTCGCCTTTGCCCTCATGCAGTTCGTCGGTCAGTGCGGGCCTCTTATAGGCACTCGTCTCTATCCCGCC CGTCACGCCCCCTTTTACACGCCCGGCATGTTGGTTTGTGCCTGTGCCATGGGTGTCGTCGCCGTATTGGGTCTG GTCTTGCGTCGTCTACTGCGCAGTCACAACCGGAACATGGATAGAGCCGATGACGAGAAGCTCACTGAAGAACGG GAGCGGCTGGTCGGCGAGGGGGAGACCATGGCGTCTACGGCGTCCAAGTCTGGGAGCACCACTGACACGACAGCC AGGTTCCGGTACATGTTGTAG |