Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03987
Gene name
Locationscaffold_04:560395..561515
Strand-
Gene length (bp)1120
Transcript length (bp)1002
Coding sequence length (bp)1002
Protein length (aa) 334

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05368 NmrA NmrA-like family 1.1E-40 8 256
PF13460 NAD_binding_10 NAD(P)H-binding 2.7E-17 12 146
PF01370 Epimerase NAD dependent epimerase/dehydratase family 1.7E-04 9 119

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 36 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03987
MASQAKTVAVFGATGKQGGAVARSLLANKAFVVRAITRNPASDASRALAEAGAHVVQADGFDGEQMRRAFESCWG
VFVNLNSDDPLFRKSGAPTEVDLGKTIVDAAVAAGVEHFVFSSGPPCVEMTDGKVNMKAMESKYKIETYARQLGR
FKTLTAINAAWYLENFLDDQAAPIFGGFPFFPDDEGYLTMRAPHWGGSNEVPFVSMGDDYGDIVQGIFLEPERYN
GRVVHGASFMVPFEKLVAAFEEATGKKARYEPLLPNWEAFDTKGIPELDDVKLMFAFTQTTGGLYFDRVPSETAT
AAELKRISGKATSRSEELVRPKEWFAKHFAASS*
Coding >Ophcf2|03987
ATGGCGTCCCAGGCAAAGACCGTTGCCGTCTTCGGCGCCACCGGCAAGCAGGGCGGTGCCGTTGCCCGCTCTCTT
CTCGCCAACAAGGCCTTTGTCGTCCGGGCCATCACCCGCAATCCAGCTTCCGACGCCAGCCGGGCACTGGCCGAG
GCGGGCGCTCACGTCGTTCAGGCTGATGGCTTCGATGGAGAGCAGATGCGTCGTGCTTTTGAGAGCTGCTGGGGT
GTCTTTGTCAACCTCAACTCGGATGATCCACTGTTCAGGAAGTCGGGGGCTCCTACGGAGGTCGACCTCGGCAAG
ACGATTGTCGATGCTGCTGTGGCCGCTGGTGTTGAGCACTTCGTCTTCAGCTCCGGTCCGCCGTGCGTCGAGATG
ACTGATGGCAAGGTTAACATGAAGGCCATGGAGTCGAAATACAAGATCGAGACGTACGCCCGACAGCTGGGTCGC
TTCAAGACGCTGACGGCCATCAACGCCGCTTGGTACCTGGAAAACTTCCTCGATGACCAGGCGGCTCCCATCTTC
GGCGGCTTCCCCTTCTTCCCCGACGACGAGGGCTACCTGACGATGCGCGCGCCTCACTGGGGCGGCTCAAATGAA
GTCCCCTTCGTTAGCATGGGCGATGACTATGGCGACATTGTGCAGGGTATCTTTCTCGAGCCTGAGCGGTATAAT
GGCCGCGTCGTCCACGGGGCCAGCTTCATGGTACCGTTCGAGAAGCTCGTCGCCGCCTTTGAAGAGGCAACCGGC
AAGAAGGCCCGTTACGAGCCTCTGCTGCCCAACTGGGAAGCCTTCGACACAAAGGGCATCCCTGAGCTGGATGAC
GTCAAGCTCATGTTTGCCTTTACGCAGACGACGGGCGGGCTGTACTTTGATCGGGTGCCGAGCGAGACGGCGACG
GCGGCGGAGTTGAAGCGGATCTCTGGCAAGGCCACGTCTCGGTCTGAGGAGCTGGTGAGGCCGAAGGAGTGGTTC
GCGAAGCACTTTGCGGCATCGAGCTAG
Transcript >Ophcf2|03987
ATGGCGTCCCAGGCAAAGACCGTTGCCGTCTTCGGCGCCACCGGCAAGCAGGGCGGTGCCGTTGCCCGCTCTCTT
CTCGCCAACAAGGCCTTTGTCGTCCGGGCCATCACCCGCAATCCAGCTTCCGACGCCAGCCGGGCACTGGCCGAG
GCGGGCGCTCACGTCGTTCAGGCTGATGGCTTCGATGGAGAGCAGATGCGTCGTGCTTTTGAGAGCTGCTGGGGT
GTCTTTGTCAACCTCAACTCGGATGATCCACTGTTCAGGAAGTCGGGGGCTCCTACGGAGGTCGACCTCGGCAAG
ACGATTGTCGATGCTGCTGTGGCCGCTGGTGTTGAGCACTTCGTCTTCAGCTCCGGTCCGCCGTGCGTCGAGATG
ACTGATGGCAAGGTTAACATGAAGGCCATGGAGTCGAAATACAAGATCGAGACGTACGCCCGACAGCTGGGTCGC
TTCAAGACGCTGACGGCCATCAACGCCGCTTGGTACCTGGAAAACTTCCTCGATGACCAGGCGGCTCCCATCTTC
GGCGGCTTCCCCTTCTTCCCCGACGACGAGGGCTACCTGACGATGCGCGCGCCTCACTGGGGCGGCTCAAATGAA
GTCCCCTTCGTTAGCATGGGCGATGACTATGGCGACATTGTGCAGGGTATCTTTCTCGAGCCTGAGCGGTATAAT
GGCCGCGTCGTCCACGGGGCCAGCTTCATGGTACCGTTCGAGAAGCTCGTCGCCGCCTTTGAAGAGGCAACCGGC
AAGAAGGCCCGTTACGAGCCTCTGCTGCCCAACTGGGAAGCCTTCGACACAAAGGGCATCCCTGAGCTGGATGAC
GTCAAGCTCATGTTTGCCTTTACGCAGACGACGGGCGGGCTGTACTTTGATCGGGTGCCGAGCGAGACGGCGACG
GCGGCGGAGTTGAAGCGGATCTCTGGCAAGGCCACGTCTCGGTCTGAGGAGCTGGTGAGGCCGAAGGAGTGGTTC
GCGAAGCACTTTGCGGCATCGAGCTAG
Gene >Ophcf2|03987
ATGGCGTCCCAGGCAAAGACCGTTGCCGTCTTCGGCGCCACCGGCAAGCAGGGCGGTGCCGTTGCCCGCTCTCTT
CTCGCCAACAAGGCCTTTGTCGTCCGGGCCATCACCCGCAATCCAGCTTCCGACGCCAGCCGGGCACTGGCCGAG
GCGGGCGCTCACGTCGTTCAGGCTGATGGCTTCGATGGAGAGCAGATGCGTCGTGCTTTTGAGAGCTGCTGGGGT
GTCTTTGTCAACCTCAACTCGGATGATCCACTGTTCAGGAAGTCGGGGGCTCCTACGGAGGTCGACCTCGGCAAG
ACGATTGTCGATGCTGCTGTGGCCGCTGGTGTTGAGCACTTCGTCTTCAGCTCCGGTCCGCCGTGCGTCGAGATG
ACTGATGGCAAGGTTAACATGAAGGCCATGGAGTGCAAGTTGCCCCCCCCCTTGAAGCCGCCATGATACTGACGG
CCCCGGCTCCGGCAGCGAAATACAAGATCGAGACGTACGCCCGACAGCTGGGTCGCTTCAAGACGCTGACGGCCA
TCAACGCCGCTTGGTACCTGGAAAACTTCCTCGATGACCAGGCGGCTCCCATCTTCGGCGGCTTCCCCTTCTTCC
CCGACGACGAGGGCTACCTGACGATGCGCGCGCCTCACTGGGGCGGCTCAAATGAAGTCCCCTTCGTTAGCATGG
GCGATGACTATGGCGACATTGTGCAGGGTATCTTTCTCGAGCCTGAGCGGTATAATGGCCGCGTCGTCCACGGGG
CCAGCTTCATGGTACCGTTCGAGAAGCTCGTCGCCGCCTTTGAAGAGGGTATGTTGTTCTGTGCTGTTCTGACAC
GTTTCACGGTCATCTGCTGATCCTCTCTTTTACAGCAACCGGCAAGAAGGCCCGTTACGAGCCTCTGCTGCCCAA
CTGGGAAGCCTTCGACACAAAGGGCATCCCTGAGCTGGATGACGTCAAGCTCATGTTTGCCTTTACGCAGACGAC
GGGCGGGCTGTACTTTGATCGGGTGCCGAGCGAGACGGCGACGGCGGCGGAGTTGAAGCGGATCTCTGGCAAGGC
CACGTCTCGGTCTGAGGAGCTGGTGAGGCCGAAGGAGTGGTTCGCGAAGCACTTTGCGGCATCGAGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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