Protein ID | Ophcf2|03987 |
Gene name | |
Location | scaffold_04:560395..561515 |
Strand | - |
Gene length (bp) | 1120 |
Transcript length (bp) | 1002 |
Coding sequence length (bp) | 1002 |
Protein length (aa) | 334 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05368 | NmrA | NmrA-like family | 1.1E-40 | 8 | 256 |
PF13460 | NAD_binding_10 | NAD(P)H-binding | 2.7E-17 | 12 | 146 |
PF01370 | Epimerase | NAD dependent epimerase/dehydratase family | 1.7E-04 | 9 | 119 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 36 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|03987 MASQAKTVAVFGATGKQGGAVARSLLANKAFVVRAITRNPASDASRALAEAGAHVVQADGFDGEQMRRAFESCWG VFVNLNSDDPLFRKSGAPTEVDLGKTIVDAAVAAGVEHFVFSSGPPCVEMTDGKVNMKAMESKYKIETYARQLGR FKTLTAINAAWYLENFLDDQAAPIFGGFPFFPDDEGYLTMRAPHWGGSNEVPFVSMGDDYGDIVQGIFLEPERYN GRVVHGASFMVPFEKLVAAFEEATGKKARYEPLLPNWEAFDTKGIPELDDVKLMFAFTQTTGGLYFDRVPSETAT AAELKRISGKATSRSEELVRPKEWFAKHFAASS* |
Coding | >Ophcf2|03987 ATGGCGTCCCAGGCAAAGACCGTTGCCGTCTTCGGCGCCACCGGCAAGCAGGGCGGTGCCGTTGCCCGCTCTCTT CTCGCCAACAAGGCCTTTGTCGTCCGGGCCATCACCCGCAATCCAGCTTCCGACGCCAGCCGGGCACTGGCCGAG GCGGGCGCTCACGTCGTTCAGGCTGATGGCTTCGATGGAGAGCAGATGCGTCGTGCTTTTGAGAGCTGCTGGGGT GTCTTTGTCAACCTCAACTCGGATGATCCACTGTTCAGGAAGTCGGGGGCTCCTACGGAGGTCGACCTCGGCAAG ACGATTGTCGATGCTGCTGTGGCCGCTGGTGTTGAGCACTTCGTCTTCAGCTCCGGTCCGCCGTGCGTCGAGATG ACTGATGGCAAGGTTAACATGAAGGCCATGGAGTCGAAATACAAGATCGAGACGTACGCCCGACAGCTGGGTCGC TTCAAGACGCTGACGGCCATCAACGCCGCTTGGTACCTGGAAAACTTCCTCGATGACCAGGCGGCTCCCATCTTC GGCGGCTTCCCCTTCTTCCCCGACGACGAGGGCTACCTGACGATGCGCGCGCCTCACTGGGGCGGCTCAAATGAA GTCCCCTTCGTTAGCATGGGCGATGACTATGGCGACATTGTGCAGGGTATCTTTCTCGAGCCTGAGCGGTATAAT GGCCGCGTCGTCCACGGGGCCAGCTTCATGGTACCGTTCGAGAAGCTCGTCGCCGCCTTTGAAGAGGCAACCGGC AAGAAGGCCCGTTACGAGCCTCTGCTGCCCAACTGGGAAGCCTTCGACACAAAGGGCATCCCTGAGCTGGATGAC GTCAAGCTCATGTTTGCCTTTACGCAGACGACGGGCGGGCTGTACTTTGATCGGGTGCCGAGCGAGACGGCGACG GCGGCGGAGTTGAAGCGGATCTCTGGCAAGGCCACGTCTCGGTCTGAGGAGCTGGTGAGGCCGAAGGAGTGGTTC GCGAAGCACTTTGCGGCATCGAGCTAG |
Transcript | >Ophcf2|03987 ATGGCGTCCCAGGCAAAGACCGTTGCCGTCTTCGGCGCCACCGGCAAGCAGGGCGGTGCCGTTGCCCGCTCTCTT CTCGCCAACAAGGCCTTTGTCGTCCGGGCCATCACCCGCAATCCAGCTTCCGACGCCAGCCGGGCACTGGCCGAG GCGGGCGCTCACGTCGTTCAGGCTGATGGCTTCGATGGAGAGCAGATGCGTCGTGCTTTTGAGAGCTGCTGGGGT GTCTTTGTCAACCTCAACTCGGATGATCCACTGTTCAGGAAGTCGGGGGCTCCTACGGAGGTCGACCTCGGCAAG ACGATTGTCGATGCTGCTGTGGCCGCTGGTGTTGAGCACTTCGTCTTCAGCTCCGGTCCGCCGTGCGTCGAGATG ACTGATGGCAAGGTTAACATGAAGGCCATGGAGTCGAAATACAAGATCGAGACGTACGCCCGACAGCTGGGTCGC TTCAAGACGCTGACGGCCATCAACGCCGCTTGGTACCTGGAAAACTTCCTCGATGACCAGGCGGCTCCCATCTTC GGCGGCTTCCCCTTCTTCCCCGACGACGAGGGCTACCTGACGATGCGCGCGCCTCACTGGGGCGGCTCAAATGAA GTCCCCTTCGTTAGCATGGGCGATGACTATGGCGACATTGTGCAGGGTATCTTTCTCGAGCCTGAGCGGTATAAT GGCCGCGTCGTCCACGGGGCCAGCTTCATGGTACCGTTCGAGAAGCTCGTCGCCGCCTTTGAAGAGGCAACCGGC AAGAAGGCCCGTTACGAGCCTCTGCTGCCCAACTGGGAAGCCTTCGACACAAAGGGCATCCCTGAGCTGGATGAC GTCAAGCTCATGTTTGCCTTTACGCAGACGACGGGCGGGCTGTACTTTGATCGGGTGCCGAGCGAGACGGCGACG GCGGCGGAGTTGAAGCGGATCTCTGGCAAGGCCACGTCTCGGTCTGAGGAGCTGGTGAGGCCGAAGGAGTGGTTC GCGAAGCACTTTGCGGCATCGAGCTAG |
Gene | >Ophcf2|03987 ATGGCGTCCCAGGCAAAGACCGTTGCCGTCTTCGGCGCCACCGGCAAGCAGGGCGGTGCCGTTGCCCGCTCTCTT CTCGCCAACAAGGCCTTTGTCGTCCGGGCCATCACCCGCAATCCAGCTTCCGACGCCAGCCGGGCACTGGCCGAG GCGGGCGCTCACGTCGTTCAGGCTGATGGCTTCGATGGAGAGCAGATGCGTCGTGCTTTTGAGAGCTGCTGGGGT GTCTTTGTCAACCTCAACTCGGATGATCCACTGTTCAGGAAGTCGGGGGCTCCTACGGAGGTCGACCTCGGCAAG ACGATTGTCGATGCTGCTGTGGCCGCTGGTGTTGAGCACTTCGTCTTCAGCTCCGGTCCGCCGTGCGTCGAGATG ACTGATGGCAAGGTTAACATGAAGGCCATGGAGTGCAAGTTGCCCCCCCCCTTGAAGCCGCCATGATACTGACGG CCCCGGCTCCGGCAGCGAAATACAAGATCGAGACGTACGCCCGACAGCTGGGTCGCTTCAAGACGCTGACGGCCA TCAACGCCGCTTGGTACCTGGAAAACTTCCTCGATGACCAGGCGGCTCCCATCTTCGGCGGCTTCCCCTTCTTCC CCGACGACGAGGGCTACCTGACGATGCGCGCGCCTCACTGGGGCGGCTCAAATGAAGTCCCCTTCGTTAGCATGG GCGATGACTATGGCGACATTGTGCAGGGTATCTTTCTCGAGCCTGAGCGGTATAATGGCCGCGTCGTCCACGGGG CCAGCTTCATGGTACCGTTCGAGAAGCTCGTCGCCGCCTTTGAAGAGGGTATGTTGTTCTGTGCTGTTCTGACAC GTTTCACGGTCATCTGCTGATCCTCTCTTTTACAGCAACCGGCAAGAAGGCCCGTTACGAGCCTCTGCTGCCCAA CTGGGAAGCCTTCGACACAAAGGGCATCCCTGAGCTGGATGACGTCAAGCTCATGTTTGCCTTTACGCAGACGAC GGGCGGGCTGTACTTTGATCGGGTGCCGAGCGAGACGGCGACGGCGGCGGAGTTGAAGCGGATCTCTGGCAAGGC CACGTCTCGGTCTGAGGAGCTGGTGAGGCCGAAGGAGTGGTTCGCGAAGCACTTTGCGGCATCGAGCTAG |