Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03983
Gene name
Locationscaffold_04:547409..549556
Strand+
Gene length (bp)2147
Transcript length (bp)1965
Coding sequence length (bp)1965
Protein length (aa) 655

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 8.9E-03 303 340
PF00400 WD40 WD domain, G-beta repeat 2.9E-04 344 380
PF00400 WD40 WD domain, G-beta repeat 9.0E-04 425 458
PF00400 WD40 WD domain, G-beta repeat 8.3E-06 535 569

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 65 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03983
MADGGFPNDAGPDEDLSIISTRGLEAFGRKVTSTASSLIVPNTDSAAMHYQTALAQVHRKLRRPSVQRSVFSMAR
TTPTDMVRARLSPTEIQHRALTRLPDELLANIPEHNNAYSLFQGFQASFPELTDDGKKHRRRVSRGRKLLDDSPS
EGAKGLKRLKKDRAALMHEFELLAIRKNMASSEIRDIDNKLANLHGMRRIILDRLAGLEQDEALMEHDIVEVDGR
LEEAQALVDEAESIAKEAPSKDESDLVADVDDDDVEFMSQSVYEKLPGSTNSTPSRRQKRVHRRISMPILHEHMD
VGSNLVEIRAHRDNITALDFDAPFGTLVTAALDDTVKVWDLTAGRCMGFLEGHTASVRALQVQDNILATGGADAT
IRLWDLSRSQYDAQGDKLGRDGEDEEAIAFENSEDQPVDPPEGSMDDCGLFTLEAHVDEVTALNFRGDVLVSGSA
DKTLRHWDLAKGRCVQTLDVMWAAAQASATHAGEGPWRPTGRPLVGGSGSGNSDFVGALQVFETALACGTADGMV
RLWDLRSGQVHRSLVGHTGPVTSLQFDNVHLVTGSLDRSVRIWDLRTGSIYDAYAYDNAITSMMFDARRITCAAG
EDVVKVYDKVEGRQWDCGAGAEEERTAAVVERVCVRDGYLVEGRRDGVVGAWTC*
Coding >Ophcf2|03983
ATGGCCGACGGCGGGTTTCCGAACGACGCCGGTCCGGACGAAGACCTGTCCATCATATCTACGCGAGGACTCGAG
GCCTTTGGTCGCAAGGTTACGTCGACGGCCTCGAGCCTCATCGTTCCCAATACCGATTCCGCTGCCATGCACTAT
CAGACAGCCTTGGCTCAGGTCCATCGCAAGCTTCGACGGCCGTCGGTCCAACGCAGTGTCTTCTCCATGGCACGA
ACCACGCCGACCGACATGGTCCGCGCGCGCCTTTCGCCGACGGAGATTCAGCACCGCGCCCTGACCCGGCTGCCG
GACGAGCTGCTGGCCAACATCCCCGAACACAACAACGCCTACTCGCTCTTCCAGGGCTTCCAGGCCAGCTTTCCC
GAGTTGACGGACGATGGCAAGAAACATCGACGTCGGGTCTCGAGGGGCAGGAAGCTTCTCGATGACAGCCCATCC
GAGGGAGCAAAGGGCCTGAAGCGTCTAAAGAAGGACAGGGCGGCTTTGATGCACGAGTTTGAGCTGCTCGCCATC
CGCAAGAACATGGCCAGCAGCGAGATTCGCGACATCGACAACAAGCTGGCCAACCTACACGGCATGCGACGCATC
ATCCTCGACCGGCTGGCCGGCCTGGAACAGGATGAGGCGCTGATGGAGCACGACATTGTCGAAGTGGACGGGAGG
CTAGAGGAGGCGCAAGCGCTGGTCGACGAGGCCGAGAGCATCGCGAAGGAGGCGCCGTCGAAAGACGAGTCGGAC
CTCGTCGCAGATGTCGATGACGACGACGTCGAGTTCATGTCGCAGTCTGTCTACGAGAAGCTGCCAGGGTCGACC
AACAGTACGCCATCGCGCCGGCAGAAGCGGGTACATCGTCGGATATCGATGCCCATATTACACGAGCACATGGAC
GTCGGGTCCAACCTCGTGGAGATTCGAGCGCACCGCGACAACATCACGGCTCTCGACTTTGACGCGCCCTTCGGC
ACTCTGGTGACGGCGGCGCTCGACGACACGGTCAAGGTCTGGGACCTGACGGCTGGGCGGTGCATGGGCTTCCTC
GAGGGCCACACGGCCTCGGTGCGCGCCCTCCAGGTCCAAGACAACATCCTGGCCACGGGCGGTGCCGACGCCACC
ATCCGGCTGTGGGACCTGAGCAGATCACAGTACGACGCACAGGGCGACAAGCTGGGTCGTGATGGCGAGGACGAA
GAGGCCATCGCCTTCGAGAATTCGGAAGATCAGCCGGTTGATCCGCCCGAGGGCAGCATGGACGACTGTGGGCTG
TTCACGCTCGAGGCCCACGTGGACGAAGTGACGGCGCTCAACTTCAGGGGGGACGTGCTGGTATCGGGCTCGGCG
GACAAGACGCTGCGGCACTGGGACCTCGCCAAGGGCCGATGCGTGCAGACGCTCGACGTCATGTGGGCGGCGGCT
CAGGCATCGGCGACTCACGCCGGCGAAGGGCCCTGGAGACCGACAGGACGACCCCTCGTGGGCGGCAGCGGCAGC
GGCAACTCGGACTTTGTGGGCGCGCTTCAGGTGTTCGAGACAGCGCTGGCGTGCGGCACGGCGGACGGCATGGTC
CGGCTCTGGGACCTCCGGAGCGGACAGGTGCACAGGAGCCTGGTGGGCCACACGGGGCCCGTGACGAGTCTGCAG
TTCGACAACGTCCACCTGGTGACGGGGAGCTTGGACAGGAGCGTGAGAATATGGGATCTTCGGACAGGATCCATC
TATGACGCTTACGCCTACGACAATGCCATCACGAGTATGATGTTCGACGCAAGAAGGATCACGTGTGCGGCTGGC
GAGGACGTGGTCAAGGTGTACGACAAGGTCGAGGGCCGCCAATGGGACTGCGGTGCCGGAGCCGAGGAGGAGAGG
ACGGCGGCGGTGGTGGAGCGGGTTTGTGTAAGAGACGGGTACCTGGTCGAGGGTCGACGGGATGGTGTCGTGGGA
GCCTGGACGTGCTGA
Transcript >Ophcf2|03983
ATGGCCGACGGCGGGTTTCCGAACGACGCCGGTCCGGACGAAGACCTGTCCATCATATCTACGCGAGGACTCGAG
GCCTTTGGTCGCAAGGTTACGTCGACGGCCTCGAGCCTCATCGTTCCCAATACCGATTCCGCTGCCATGCACTAT
CAGACAGCCTTGGCTCAGGTCCATCGCAAGCTTCGACGGCCGTCGGTCCAACGCAGTGTCTTCTCCATGGCACGA
ACCACGCCGACCGACATGGTCCGCGCGCGCCTTTCGCCGACGGAGATTCAGCACCGCGCCCTGACCCGGCTGCCG
GACGAGCTGCTGGCCAACATCCCCGAACACAACAACGCCTACTCGCTCTTCCAGGGCTTCCAGGCCAGCTTTCCC
GAGTTGACGGACGATGGCAAGAAACATCGACGTCGGGTCTCGAGGGGCAGGAAGCTTCTCGATGACAGCCCATCC
GAGGGAGCAAAGGGCCTGAAGCGTCTAAAGAAGGACAGGGCGGCTTTGATGCACGAGTTTGAGCTGCTCGCCATC
CGCAAGAACATGGCCAGCAGCGAGATTCGCGACATCGACAACAAGCTGGCCAACCTACACGGCATGCGACGCATC
ATCCTCGACCGGCTGGCCGGCCTGGAACAGGATGAGGCGCTGATGGAGCACGACATTGTCGAAGTGGACGGGAGG
CTAGAGGAGGCGCAAGCGCTGGTCGACGAGGCCGAGAGCATCGCGAAGGAGGCGCCGTCGAAAGACGAGTCGGAC
CTCGTCGCAGATGTCGATGACGACGACGTCGAGTTCATGTCGCAGTCTGTCTACGAGAAGCTGCCAGGGTCGACC
AACAGTACGCCATCGCGCCGGCAGAAGCGGGTACATCGTCGGATATCGATGCCCATATTACACGAGCACATGGAC
GTCGGGTCCAACCTCGTGGAGATTCGAGCGCACCGCGACAACATCACGGCTCTCGACTTTGACGCGCCCTTCGGC
ACTCTGGTGACGGCGGCGCTCGACGACACGGTCAAGGTCTGGGACCTGACGGCTGGGCGGTGCATGGGCTTCCTC
GAGGGCCACACGGCCTCGGTGCGCGCCCTCCAGGTCCAAGACAACATCCTGGCCACGGGCGGTGCCGACGCCACC
ATCCGGCTGTGGGACCTGAGCAGATCACAGTACGACGCACAGGGCGACAAGCTGGGTCGTGATGGCGAGGACGAA
GAGGCCATCGCCTTCGAGAATTCGGAAGATCAGCCGGTTGATCCGCCCGAGGGCAGCATGGACGACTGTGGGCTG
TTCACGCTCGAGGCCCACGTGGACGAAGTGACGGCGCTCAACTTCAGGGGGGACGTGCTGGTATCGGGCTCGGCG
GACAAGACGCTGCGGCACTGGGACCTCGCCAAGGGCCGATGCGTGCAGACGCTCGACGTCATGTGGGCGGCGGCT
CAGGCATCGGCGACTCACGCCGGCGAAGGGCCCTGGAGACCGACAGGACGACCCCTCGTGGGCGGCAGCGGCAGC
GGCAACTCGGACTTTGTGGGCGCGCTTCAGGTGTTCGAGACAGCGCTGGCGTGCGGCACGGCGGACGGCATGGTC
CGGCTCTGGGACCTCCGGAGCGGACAGGTGCACAGGAGCCTGGTGGGCCACACGGGGCCCGTGACGAGTCTGCAG
TTCGACAACGTCCACCTGGTGACGGGGAGCTTGGACAGGAGCGTGAGAATATGGGATCTTCGGACAGGATCCATC
TATGACGCTTACGCCTACGACAATGCCATCACGAGTATGATGTTCGACGCAAGAAGGATCACGTGTGCGGCTGGC
GAGGACGTGGTCAAGGTGTACGACAAGGTCGAGGGCCGCCAATGGGACTGCGGTGCCGGAGCCGAGGAGGAGAGG
ACGGCGGCGGTGGTGGAGCGGGTTTGTGTAAGAGACGGGTACCTGGTCGAGGGTCGACGGGATGGTGTCGTGGGA
GCCTGGACGTGCTGA
Gene >Ophcf2|03983
ATGGCCGACGGCGGGTTTCCGAACGACGCCGGTCCGGACGAAGACCTGTCCATCATATCTGTACGTCTGCCCGTC
GCATCCAAAACAACAACGGTGCTGACGGGAAATGGCAGACGCGAGGACTCGAGGCCTTTGGTCGCAAGGTTACGT
CGACGGCCTCGAGCCTCATCGTTCCCAATACCGATTCCGCTGCCATGCACTATCAGACAGCCTTGGCTCAGGTCC
ATCGCAAGCTTCGACGGCCGTCGGTCCAACGCAGTGTCTTCTCCATGGCACGAACCACGCCGACCGACATGGTCC
GCGCGCGCCTTTCGCCGACGGAGATTCAGCACCGCGCCCTGACCCGGCTGCCGGACGAGCTGCTGGCCAACATCC
CCGAACACAACAACGCCTACTCGCTCTTCCAGGGCTTCCAGGCCAGCTTTCCCGAGTTGACGGACGATGGCAAGA
AACATCGACGTCGGGTCTCGAGGGGCAGGAAGCTTCTCGATGACAGCCCATCCGAGGGAGCAAAGGGCCTGAAGC
GTCTAAAGAAGGACAGGGCGGCTTTGATGCACGAGTTTGAGCTGCTCGCCATCCGCAAGAACATGGCCAGCAGCG
AGATTCGCGACATCGACAACAAGCTGGCCAACCTACACGGCATGCGACGCATCATCCTCGACCGGCTGGCCGGCC
TGGAACAGGATGAGGCGCTGATGGAGCACGACAGTAGGTGTCACATCCCAGAAATACACTCCCGAAGCCCGACTA
CATTTGCTCACGTCACACCAGTTGTCGAAGTGGACGGGAGGCTAGAGGAGGCGCAAGCGCTGGTCGACGAGGCCG
AGAGCATCGCGAAGGAGGCGCCGTCGAAAGACGAGTCGGACCTCGTCGCAGATGTCGATGACGACGACGTCGAGT
TCATGTCGCAGTCTGTCTACGAGAAGCTGCCAGGGTCGACCAACAGTACGCCATCGCGCCGGCAGAAGCGGGTAC
ATCGTCGGATATCGATGCCCATATTACACGAGCACATGGACGTCGGGTCCAACCTCGTGGAGATTCGAGCGCACC
GCGACAACATCACGGCTCTCGACTTTGACGCGCCCTTCGGCACTCTGGTGACGGCGGCGCTCGACGACACGGTCA
AGGTCTGGGACCTGACGGCTGGGCGGTGCATGGGCTTCCTCGAGGGCCACACGGCCTCGGTGCGCGCCCTCCAGG
TCCAAGACAACATCCTGGCCACGGGCGGTGCCGACGCCACCATCCGGCTGTGGGACCTGAGCAGATCACAGTACG
ACGCACAGGGCGACAAGCTGGGTCGTGATGGCGAGGACGAAGAGGCCATCGCCTTCGAGAATTCGGAAGATCAGC
CGGTTGATCCGCCCGAGGGCAGCATGGACGACTGTGGGCTGTTCACGCTCGAGGCCCACGTGGACGAAGTGACGG
CGCTCAACTTCAGGGGGGACGTGCTGGTATCGGGCTCGGCGGACAAGACGCTGCGGCACTGGGACCTCGCCAAGG
GCCGATGCGTGCAGACGCTCGACGTCATGTGGGCGGCGGCTCAGGCATCGGCGACTCACGCCGGCGAAGGGCCCT
GGAGACCGACAGGACGACCCCTCGTGGGCGGCAGCGGCAGCGGCAACTCGGACTTTGTGGGCGCGCTTCAGGTGT
TCGAGACAGCGCTGGCGTGCGGCACGGCGGACGGCATGGTCCGGCTCTGGGACCTCCGGAGCGGACAGGTGCACA
GGAGCCTGGTGGGCCACACGGGGCCCGTGACGAGTCTGCAGTTCGACAACGTCCACCTGGTGACGGGGAGCTTGG
ACAGGAGCGTGAGAGTGAGTGTGACGATGACGATGACGACGGCATTAACCCATGAACAAAGCGGCTGACTGGTTT
TCCAGATATGGGATCTTCGGACAGGATCCATCTATGACGCTTACGCCTACGACAATGCCATCACGAGTATGATGT
TCGACGCAAGAAGGATCACGTGTGCGGCTGGCGAGGACGTGGTCAAGGTGTACGACAAGGTCGAGGGCCGCCAAT
GGGACTGCGGTGCCGGAGCCGAGGAGGAGAGGACGGCGGCGGTGGTGGAGCGGGTTTGTGTAAGAGACGGGTACC
TGGTCGAGGGTCGACGGGATGGTGTCGTGGGAGCCTGGACGTGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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