© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|03981 |
| Gene name | |
| Location | scaffold_04:544737..545650 |
| Strand | + |
| Gene length (bp) | 913 |
| Transcript length (bp) | 858 |
| Coding sequence length (bp) | 858 |
| Protein length (aa) | 286 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13862 | BCCIP | BCCIP | 1.1E-64 | 33 | 225 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|03981 MGKKRARDEAKNLPSGGQDADQMDRDDDDDFDMVDVEFEWFNFDPEIDFHGVKSLVRQLLDVDASLFDVSALAEL VLSQPTIGSTVKVDGKATDPYAMLTVLNLREHCQKEPMKRLMAYLVEKARANKAISAIADAIEADKQIGLILSER LINVPSEIGPPMYSMLVDEVEAAVEDGEPYQFSHYLVLSKTYREIESTLDVEDRKRKKAREDSTTYYFHPEDEML HRHAAAHGGFAYTKEEDAVADSKRAFQDMGIKPAGHMILIEADKFESAVKAINDYLKPPQ* |
| Coding | >Ophcf2|03981 ATGGGCAAGAAACGTGCGAGAGACGAGGCAAAGAATCTCCCGTCGGGGGGGCAAGATGCCGATCAGATGGATCGC GACGACGATGATGACTTCGATATGGTCGACGTCGAGTTCGAATGGTTCAATTTTGATCCCGAGATAGACTTTCAC GGTGTCAAGTCCCTCGTTCGCCAGCTTCTCGACGTCGACGCCAGCCTCTTCGACGTGTCCGCCCTCGCCGAGCTC GTGCTGTCCCAGCCAACAATCGGGTCGACGGTCAAGGTCGACGGCAAGGCTACCGATCCATACGCCATGCTCACC GTCCTCAACTTGCGCGAGCACTGCCAGAAAGAGCCCATGAAGCGTCTGATGGCATACCTTGTGGAGAAGGCGCGC GCCAACAAGGCCATCTCTGCCATCGCTGACGCGATAGAGGCCGACAAGCAGATCGGACTGATTCTCTCCGAACGT CTGATCAATGTGCCGTCCGAAATTGGTCCCCCAATGTACTCGATGCTCGTGGACGAGGTCGAAGCCGCCGTGGAG GACGGTGAGCCCTACCAGTTCAGTCACTACCTCGTCTTGTCCAAGACGTATCGCGAGATAGAGTCGACGTTGGAC GTTGAGGATCGCAAGCGCAAAAAGGCCCGCGAGGACTCGACTACGTACTATTTTCACCCCGAAGACGAGATGCTC CACAGGCACGCCGCCGCGCATGGCGGCTTTGCCTACACCAAGGAGGAGGACGCGGTCGCGGACAGCAAGCGCGCG TTCCAGGACATGGGCATCAAACCGGCTGGTCACATGATTCTCATTGAGGCGGACAAGTTCGAGAGTGCCGTCAAG GCGATCAACGACTATCTGAAGCCGCCGCAATAA |
| Transcript | >Ophcf2|03981 ATGGGCAAGAAACGTGCGAGAGACGAGGCAAAGAATCTCCCGTCGGGGGGGCAAGATGCCGATCAGATGGATCGC GACGACGATGATGACTTCGATATGGTCGACGTCGAGTTCGAATGGTTCAATTTTGATCCCGAGATAGACTTTCAC GGTGTCAAGTCCCTCGTTCGCCAGCTTCTCGACGTCGACGCCAGCCTCTTCGACGTGTCCGCCCTCGCCGAGCTC GTGCTGTCCCAGCCAACAATCGGGTCGACGGTCAAGGTCGACGGCAAGGCTACCGATCCATACGCCATGCTCACC GTCCTCAACTTGCGCGAGCACTGCCAGAAAGAGCCCATGAAGCGTCTGATGGCATACCTTGTGGAGAAGGCGCGC GCCAACAAGGCCATCTCTGCCATCGCTGACGCGATAGAGGCCGACAAGCAGATCGGACTGATTCTCTCCGAACGT CTGATCAATGTGCCGTCCGAAATTGGTCCCCCAATGTACTCGATGCTCGTGGACGAGGTCGAAGCCGCCGTGGAG GACGGTGAGCCCTACCAGTTCAGTCACTACCTCGTCTTGTCCAAGACGTATCGCGAGATAGAGTCGACGTTGGAC GTTGAGGATCGCAAGCGCAAAAAGGCCCGCGAGGACTCGACTACGTACTATTTTCACCCCGAAGACGAGATGCTC CACAGGCACGCCGCCGCGCATGGCGGCTTTGCCTACACCAAGGAGGAGGACGCGGTCGCGGACAGCAAGCGCGCG TTCCAGGACATGGGCATCAAACCGGCTGGTCACATGATTCTCATTGAGGCGGACAAGTTCGAGAGTGCCGTCAAG GCGATCAACGACTATCTGAAGCCGCCGCAATAA |
| Gene | >Ophcf2|03981 ATGGGCAAGAAACGTGCGAGAGACGAGGCAAAGAATCTCCCGTCGGGGGGGCAAGATGCCGATCAGATGGATCGC GACGACGATGTAGAGATCCCTTATCAGATCTTGTTGAATGCCCATGCTCACCTTGTCAATGCAGGATGACTTCGA TATGGTCGACGTCGAGTTCGAATGGTTCAATTTTGATCCCGAGATAGACTTTCACGGTGTCAAGTCCCTCGTTCG CCAGCTTCTCGACGTCGACGCCAGCCTCTTCGACGTGTCCGCCCTCGCCGAGCTCGTGCTGTCCCAGCCAACAAT CGGGTCGACGGTCAAGGTCGACGGCAAGGCTACCGATCCATACGCCATGCTCACCGTCCTCAACTTGCGCGAGCA CTGCCAGAAAGAGCCCATGAAGCGTCTGATGGCATACCTTGTGGAGAAGGCGCGCGCCAACAAGGCCATCTCTGC CATCGCTGACGCGATAGAGGCCGACAAGCAGATCGGACTGATTCTCTCCGAACGTCTGATCAATGTGCCGTCCGA AATTGGTCCCCCAATGTACTCGATGCTCGTGGACGAGGTCGAAGCCGCCGTGGAGGACGGTGAGCCCTACCAGTT CAGTCACTACCTCGTCTTGTCCAAGACGTATCGCGAGATAGAGTCGACGTTGGACGTTGAGGATCGCAAGCGCAA AAAGGCCCGCGAGGACTCGACTACGTACTATTTTCACCCCGAAGACGAGATGCTCCACAGGCACGCCGCCGCGCA TGGCGGCTTTGCCTACACCAAGGAGGAGGACGCGGTCGCGGACAGCAAGCGCGCGTTCCAGGACATGGGCATCAA ACCGGCTGGTCACATGATTCTCATTGAGGCGGACAAGTTCGAGAGTGCCGTCAAGGCGATCAACGACTATCTGAA GCCGCCGCAATAA |