Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03980
Gene name
Locationscaffold_04:542372..544273
Strand-
Gene length (bp)1901
Transcript length (bp)1794
Coding sequence length (bp)1794
Protein length (aa) 598

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09325 Vps5 Vps5 C terminal like 4.4E-08 300 485
PF00787 PX PX domain 2.3E-07 165 245

GO

GO Term Description Terminal node
GO:0035091 phosphatidylinositol binding Yes
GO:0005543 phospholipid binding No
GO:0008289 lipid binding No
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03980
MDYSASINEADDPAGVSPWGNSPISSPQNRSDFENMAATDPPPFPFSPQSPNGLGQTEGFQPSATASKDSATAQP
ETENTASAVPEATVASPEGSADPFPGAIPSPKSPEDTSAPLLQPASAKQPQKPSTPQPRLQAKITGLERTGKKDP
ILRFDIHTNLPRFRTTQYRDVRRLHSEFVKLADHLISANPEALVPAVPPPVTAAGAGTEEDENRVKSTMQRWFNY
VFSNEVLMKDDEMILFVESDFGYSPMVKMKQPATGVRRKILKQFAPPPDDTPELASARPAVKLFYLGTMDAGHKV
DKMVKARRGLGLAESDFGVKLGTMHVQEPHPGLSHAFRKLGKIIQTVGDYHAAQATAEAATIGDAFQYHSHDSFI
VKESLTNRQILTREFLQAQEATRSRLNAADRLKASSSVRRDKVDEAIAALDEARQTETALLAKTTRVTHNLVLER
RKWFSRTAIDLRLAVRDYVLRQIEAERRTLAVLETVRPDIRSIDASGGLSRLGRESTPRAAVRRTSLAASQGPKG
DSWSGVPRRSDASSRAVSASFMGRLPEEGEGDGGEAGLAASGLLLSPGGVNEDDEDRIDARNAASRLATSTF*
Coding >Ophcf2|03980
ATGGACTATAGCGCCTCCATCAACGAGGCGGACGACCCTGCTGGCGTCTCTCCCTGGGGAAATTCGCCCATCTCG
TCACCGCAGAATCGGTCTGATTTCGAGAACATGGCCGCCACCGACCCGCCGCCGTTCCCCTTCTCGCCTCAGTCT
CCAAACGGCCTCGGCCAGACAGAAGGCTTCCAGCCCTCAGCAACGGCCAGCAAGGATTCTGCGACTGCGCAGCCC
GAAACAGAGAACACGGCTTCTGCTGTCCCGGAAGCGACTGTCGCATCGCCAGAGGGCAGCGCCGACCCTTTCCCC
GGCGCAATTCCATCGCCAAAGTCGCCCGAGGACACGTCTGCGCCCCTTTTGCAACCGGCGAGCGCAAAGCAGCCA
CAGAAGCCGTCTACTCCCCAGCCGAGACTCCAAGCGAAGATCACAGGTCTTGAACGCACCGGCAAGAAGGATCCA
ATCCTCCGCTTCGATATTCACACGAACCTCCCTCGATTCCGCACCACGCAGTACCGAGACGTCCGTCGTCTTCAC
TCGGAGTTTGTCAAGCTGGCCGATCACTTGATATCAGCCAACCCCGAAGCCCTGGTTCCCGCCGTGCCGCCTCCC
GTCACAGCGGCCGGAGCCGGCACCGAGGAAGACGAGAATCGGGTCAAGTCGACGATGCAGCGATGGTTCAACTAC
GTGTTCAGCAATGAGGTGCTGATGAAGGACGACGAAATGATTCTCTTCGTAGAGAGTGACTTTGGCTACAGCCCC
ATGGTCAAGATGAAGCAGCCGGCGACAGGCGTCCGACGCAAGATCCTGAAGCAGTTTGCGCCACCGCCAGACGAC
ACCCCTGAGCTCGCCTCGGCTCGTCCGGCAGTCAAGCTGTTTTATCTAGGCACCATGGACGCAGGTCACAAGGTC
GACAAGATGGTCAAGGCCCGAAGAGGACTCGGCCTCGCAGAATCCGACTTTGGTGTCAAGTTGGGAACCATGCAC
GTCCAAGAACCTCATCCAGGCCTCTCCCACGCTTTCCGCAAGCTGGGTAAGATTATCCAAACAGTAGGCGACTAC
CACGCAGCACAAGCGACGGCCGAAGCCGCAACGATAGGCGACGCCTTCCAATACCACTCGCACGATTCCTTCATC
GTAAAGGAGTCCCTCACGAACCGACAGATCCTCACCCGCGAATTCCTCCAAGCGCAAGAGGCAACACGCTCCCGA
CTCAACGCCGCAGACCGTCTCAAAGCCAGCTCCAGCGTCCGTCGCGACAAGGTAGACGAAGCCATCGCCGCCCTC
GACGAAGCCCGCCAAACAGAAACAGCCCTCCTCGCGAAAACAACCCGCGTGACGCACAATCTCGTCCTCGAACGA
CGCAAATGGTTCTCCCGCACAGCCATAGACCTCCGCCTCGCTGTCCGCGATTACGTCCTCCGCCAAATCGAAGCC
GAACGCCGCACCCTCGCCGTCCTCGAAACCGTCCGTCCCGACATCCGCTCCATCGACGCCTCGGGCGGTCTCAGC
CGTCTAGGCCGCGAATCCACCCCCCGAGCCGCCGTCCGACGCACCAGCCTGGCCGCCAGCCAGGGTCCCAAGGGC
GACTCCTGGAGCGGCGTCCCCCGTCGGTCGGATGCTTCCAGCCGCGCCGTCTCGGCCAGTTTCATGGGGAGGCTT
CCTGAGGAGGGCGAGGGGGATGGCGGTGAGGCTGGCCTTGCGGCTTCGGGTCTGCTGCTCAGTCCCGGGGGTGTC
AATGAGGATGATGAGGATCGTATCGATGCTAGGAACGCGGCTAGTCGTCTGGCGACGAGTACTTTTTGA
Transcript >Ophcf2|03980
ATGGACTATAGCGCCTCCATCAACGAGGCGGACGACCCTGCTGGCGTCTCTCCCTGGGGAAATTCGCCCATCTCG
TCACCGCAGAATCGGTCTGATTTCGAGAACATGGCCGCCACCGACCCGCCGCCGTTCCCCTTCTCGCCTCAGTCT
CCAAACGGCCTCGGCCAGACAGAAGGCTTCCAGCCCTCAGCAACGGCCAGCAAGGATTCTGCGACTGCGCAGCCC
GAAACAGAGAACACGGCTTCTGCTGTCCCGGAAGCGACTGTCGCATCGCCAGAGGGCAGCGCCGACCCTTTCCCC
GGCGCAATTCCATCGCCAAAGTCGCCCGAGGACACGTCTGCGCCCCTTTTGCAACCGGCGAGCGCAAAGCAGCCA
CAGAAGCCGTCTACTCCCCAGCCGAGACTCCAAGCGAAGATCACAGGTCTTGAACGCACCGGCAAGAAGGATCCA
ATCCTCCGCTTCGATATTCACACGAACCTCCCTCGATTCCGCACCACGCAGTACCGAGACGTCCGTCGTCTTCAC
TCGGAGTTTGTCAAGCTGGCCGATCACTTGATATCAGCCAACCCCGAAGCCCTGGTTCCCGCCGTGCCGCCTCCC
GTCACAGCGGCCGGAGCCGGCACCGAGGAAGACGAGAATCGGGTCAAGTCGACGATGCAGCGATGGTTCAACTAC
GTGTTCAGCAATGAGGTGCTGATGAAGGACGACGAAATGATTCTCTTCGTAGAGAGTGACTTTGGCTACAGCCCC
ATGGTCAAGATGAAGCAGCCGGCGACAGGCGTCCGACGCAAGATCCTGAAGCAGTTTGCGCCACCGCCAGACGAC
ACCCCTGAGCTCGCCTCGGCTCGTCCGGCAGTCAAGCTGTTTTATCTAGGCACCATGGACGCAGGTCACAAGGTC
GACAAGATGGTCAAGGCCCGAAGAGGACTCGGCCTCGCAGAATCCGACTTTGGTGTCAAGTTGGGAACCATGCAC
GTCCAAGAACCTCATCCAGGCCTCTCCCACGCTTTCCGCAAGCTGGGTAAGATTATCCAAACAGTAGGCGACTAC
CACGCAGCACAAGCGACGGCCGAAGCCGCAACGATAGGCGACGCCTTCCAATACCACTCGCACGATTCCTTCATC
GTAAAGGAGTCCCTCACGAACCGACAGATCCTCACCCGCGAATTCCTCCAAGCGCAAGAGGCAACACGCTCCCGA
CTCAACGCCGCAGACCGTCTCAAAGCCAGCTCCAGCGTCCGTCGCGACAAGGTAGACGAAGCCATCGCCGCCCTC
GACGAAGCCCGCCAAACAGAAACAGCCCTCCTCGCGAAAACAACCCGCGTGACGCACAATCTCGTCCTCGAACGA
CGCAAATGGTTCTCCCGCACAGCCATAGACCTCCGCCTCGCTGTCCGCGATTACGTCCTCCGCCAAATCGAAGCC
GAACGCCGCACCCTCGCCGTCCTCGAAACCGTCCGTCCCGACATCCGCTCCATCGACGCCTCGGGCGGTCTCAGC
CGTCTAGGCCGCGAATCCACCCCCCGAGCCGCCGTCCGACGCACCAGCCTGGCCGCCAGCCAGGGTCCCAAGGGC
GACTCCTGGAGCGGCGTCCCCCGTCGGTCGGATGCTTCCAGCCGCGCCGTCTCGGCCAGTTTCATGGGGAGGCTT
CCTGAGGAGGGCGAGGGGGATGGCGGTGAGGCTGGCCTTGCGGCTTCGGGTCTGCTGCTCAGTCCCGGGGGTGTC
AATGAGGATGATGAGGATCGTATCGATGCTAGGAACGCGGCTAGTCGTCTGGCGACGAGTACTTTTTGA
Gene >Ophcf2|03980
ATGGACTATAGCGCCTCCATCAACGAGGCGGACGACCCTGCTGGCGTCTCTCCCTGGGGAAATTCGCCCATCTCG
TCACCGCAGAATCGGTCTGATTTCGAGAACATGGCCGCCACCGACCCGCCGCCGTTCCCCTTCTCGCCTCAGTCT
CCAAACGGCCTCGGCCAGACAGAAGGCTTCCAGCCCTCAGCAACGGCCAGCAAGGATTCTGCGACTGCGCAGCCC
GAAACAGAGAACACGGCTTCTGCTGTCCCGGAAGCGACTGTCGCATCGCCAGAGGGCAGCGCCGACCCTTTCCCC
GGCGCAATTCCATCGCCAAAGTCGCCCGAGGACACGTCTGCGCCCCTTTTGCAACCGGCGAGCGCAAAGCAGCCA
CAGAAGCCGTCTACTCCCCAGCCGAGACTCCAAGCGAAGATCACAGGTCTTGAACGCACCGGCAAGAAGGATCCA
ATCCTCCGCTTCGATATTCACGTACAGTTCGAGATTACGAGCTGCAAAATGACGGATACACTGACAAATGATAGA
CGAACCTCCCTCGATTCCGCACCACGCAGTACCGAGACGTCCGTCGTCTTCACTCGGAGTTTGTCAAGCTGGCCG
ATCACTTGATATCAGCCAACCCCGAAGCCCTGGTTCCCGCCGTGCCGCCTCCCGTCACAGCGGCCGGAGCCGGCA
CCGAGGAAGACGAGAATCGGGTCAAGTCGACGATGCAGCGATGGTTCAACTACGTGTTCAGCAATGAGGTGCTGA
TGAAGGACGACGAAATGATTCTCTTCGTAGAGAGTGACTTTGGCTACAGCCCCATGGTCAAGATGAAGCAGCCGG
CGACAGGCGTCCGACGCAAGATCCTGAAGCAGTTTGCGCCACCGCCAGACGACACCCCTGAGCTCGCCTCGGCTC
GTCCGGCAGTCAAGCTGTTTTATCTAGGCACCATGGACGCAGGTCACAAGGTCGACAAGATGGTCAAGGCCCGAA
GAGGTATGACGGCATCGTCATAAACGAGACTCGACTCCATCTGACGAGAAAACGCAGGACTCGGCCTCGCAGAAT
CCGACTTTGGTGTCAAGTTGGGAACCATGCACGTCCAAGAACCTCATCCAGGCCTCTCCCACGCTTTCCGCAAGC
TGGGTAAGATTATCCAAACAGTAGGCGACTACCACGCAGCACAAGCGACGGCCGAAGCCGCAACGATAGGCGACG
CCTTCCAATACCACTCGCACGATTCCTTCATCGTAAAGGAGTCCCTCACGAACCGACAGATCCTCACCCGCGAAT
TCCTCCAAGCGCAAGAGGCAACACGCTCCCGACTCAACGCCGCAGACCGTCTCAAAGCCAGCTCCAGCGTCCGTC
GCGACAAGGTAGACGAAGCCATCGCCGCCCTCGACGAAGCCCGCCAAACAGAAACAGCCCTCCTCGCGAAAACAA
CCCGCGTGACGCACAATCTCGTCCTCGAACGACGCAAATGGTTCTCCCGCACAGCCATAGACCTCCGCCTCGCTG
TCCGCGATTACGTCCTCCGCCAAATCGAAGCCGAACGCCGCACCCTCGCCGTCCTCGAAACCGTCCGTCCCGACA
TCCGCTCCATCGACGCCTCGGGCGGTCTCAGCCGTCTAGGCCGCGAATCCACCCCCCGAGCCGCCGTCCGACGCA
CCAGCCTGGCCGCCAGCCAGGGTCCCAAGGGCGACTCCTGGAGCGGCGTCCCCCGTCGGTCGGATGCTTCCAGCC
GCGCCGTCTCGGCCAGTTTCATGGGGAGGCTTCCTGAGGAGGGCGAGGGGGATGGCGGTGAGGCTGGCCTTGCGG
CTTCGGGTCTGCTGCTCAGTCCCGGGGGTGTCAATGAGGATGATGAGGATCGTATCGATGCTAGGAACGCGGCTA
GTCGTCTGGCGACGAGTACTTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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