Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03973
Gene name
Locationscaffold_04:522704..524162
Strand+
Gene length (bp)1458
Transcript length (bp)1392
Coding sequence length (bp)1392
Protein length (aa) 464

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10332 DUF2418 Protein of unknown function (DUF2418) 1.0E-33 163 267

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.5

Transmembrane Domains

Domain # Start End Length
1 80 102 22
2 180 199 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03973
MPRLVRRKPLRERIAAMLNPMDLLLWLSEEVETREWDSQLVGTQLGLGLNSILLLARANSASVAPLANDDLFGEG
ATSSWVSLFVLPLVWALVILSLTNAFYAFCRTRSYRLFQVSVDKRPATPSARRVKVHSSPASSSPLRLLADMVTS
QSAESRAHPDKDKDVWEIAVWDPLPMSMRLLCFFSPGHVLVYLLFLPLAPLDPRPSMTVFNSLVMQLLLTVQMLL
ICQRFGQQGKDNTIIQKEVMREYDAKFVHPRLYPVVRDVGTQMSEDETTEFVHIGSPTTLLRRGFKTHGNPHIDM
PEPTTTSGYMKPRMFTSPAASRRVETLAPSGLRGTGLRGTGLRNNSLPAASSSVVAAESVQTEGGSLPTLGRNRE
FEGLFGVYTHNKSPLKKTFTVDDLIDQPLPKTSREMAAWEQHPLRGSVSPKKQSSSHKALTVSGEAQPNSLADTG
RPRPQYERYPSRW*
Coding >Ophcf2|03973
ATGCCCCGGCTCGTACGTCGAAAGCCCCTTCGGGAGCGCATAGCCGCAATGCTCAACCCCATGGATCTCCTTCTG
TGGCTGTCGGAGGAGGTCGAGACGAGAGAGTGGGATTCGCAGTTGGTGGGAACGCAGCTCGGGCTGGGCCTCAAC
TCCATTTTATTACTGGCGAGAGCCAACTCGGCTTCTGTCGCGCCGTTAGCCAACGATGATCTGTTTGGTGAAGGT
GCTACGTCGAGCTGGGTATCTCTTTTTGTCCTGCCTCTCGTTTGGGCTCTCGTCATCCTTTCTCTTACCAATGCT
TTTTACGCGTTTTGCCGGACGAGATCCTACCGTCTCTTCCAGGTCAGCGTCGACAAGCGCCCTGCCACGCCTTCG
GCACGACGCGTCAAGGTTCATTCATCGCCCGCCTCGTCCTCGCCGCTTCGTCTCTTGGCGGATATGGTGACCTCC
CAGTCCGCCGAGTCACGAGCCCATCCGGACAAGGACAAGGACGTGTGGGAGATAGCCGTCTGGGATCCGCTACCC
ATGTCTATGCGCCTCCTTTGCTTCTTCAGCCCAGGTCACGTCCTCGTCTATCTGCTCTTTCTCCCGCTCGCCCCT
CTCGATCCCCGTCCCAGCATGACGGTCTTCAACAGCCTCGTGATGCAACTCTTGCTGACGGTCCAAATGCTTCTA
ATCTGCCAGCGCTTCGGTCAGCAGGGCAAGGATAATACCATCATTCAGAAGGAAGTCATGCGCGAGTACGATGCA
AAATTTGTCCATCCCCGTCTGTATCCGGTTGTTCGCGACGTGGGGACCCAGATGTCTGAAGATGAGACTACTGAA
TTCGTGCACATCGGCTCACCTACGACGCTCCTCCGTCGCGGCTTCAAGACACACGGCAACCCGCACATCGACATG
CCGGAGCCGACGACTACCAGCGGATACATGAAGCCGCGGATGTTTACGTCTCCCGCCGCCAGCCGACGAGTCGAG
ACCTTGGCACCCTCAGGCCTTCGCGGCACGGGCCTTCGCGGCACGGGCCTACGCAACAACAGCCTGCCGGCAGCC
TCGTCGTCCGTAGTGGCGGCGGAATCCGTGCAGACGGAGGGCGGCTCTCTTCCGACGCTGGGACGAAATCGCGAA
TTTGAGGGGCTTTTTGGTGTGTACACGCACAACAAGTCACCGCTCAAGAAGACGTTTACCGTGGACGACTTGATC
GATCAGCCGCTACCGAAAACCTCGAGAGAGATGGCAGCCTGGGAGCAGCATCCCCTGCGGGGGTCGGTCAGCCCG
AAGAAGCAATCCAGCTCCCACAAGGCACTCACTGTCAGTGGGGAGGCACAACCCAACTCGTTGGCCGATACGGGC
AGACCTAGGCCGCAGTATGAGAGATACCCGTCACGATGGTAA
Transcript >Ophcf2|03973
ATGCCCCGGCTCGTACGTCGAAAGCCCCTTCGGGAGCGCATAGCCGCAATGCTCAACCCCATGGATCTCCTTCTG
TGGCTGTCGGAGGAGGTCGAGACGAGAGAGTGGGATTCGCAGTTGGTGGGAACGCAGCTCGGGCTGGGCCTCAAC
TCCATTTTATTACTGGCGAGAGCCAACTCGGCTTCTGTCGCGCCGTTAGCCAACGATGATCTGTTTGGTGAAGGT
GCTACGTCGAGCTGGGTATCTCTTTTTGTCCTGCCTCTCGTTTGGGCTCTCGTCATCCTTTCTCTTACCAATGCT
TTTTACGCGTTTTGCCGGACGAGATCCTACCGTCTCTTCCAGGTCAGCGTCGACAAGCGCCCTGCCACGCCTTCG
GCACGACGCGTCAAGGTTCATTCATCGCCCGCCTCGTCCTCGCCGCTTCGTCTCTTGGCGGATATGGTGACCTCC
CAGTCCGCCGAGTCACGAGCCCATCCGGACAAGGACAAGGACGTGTGGGAGATAGCCGTCTGGGATCCGCTACCC
ATGTCTATGCGCCTCCTTTGCTTCTTCAGCCCAGGTCACGTCCTCGTCTATCTGCTCTTTCTCCCGCTCGCCCCT
CTCGATCCCCGTCCCAGCATGACGGTCTTCAACAGCCTCGTGATGCAACTCTTGCTGACGGTCCAAATGCTTCTA
ATCTGCCAGCGCTTCGGTCAGCAGGGCAAGGATAATACCATCATTCAGAAGGAAGTCATGCGCGAGTACGATGCA
AAATTTGTCCATCCCCGTCTGTATCCGGTTGTTCGCGACGTGGGGACCCAGATGTCTGAAGATGAGACTACTGAA
TTCGTGCACATCGGCTCACCTACGACGCTCCTCCGTCGCGGCTTCAAGACACACGGCAACCCGCACATCGACATG
CCGGAGCCGACGACTACCAGCGGATACATGAAGCCGCGGATGTTTACGTCTCCCGCCGCCAGCCGACGAGTCGAG
ACCTTGGCACCCTCAGGCCTTCGCGGCACGGGCCTTCGCGGCACGGGCCTACGCAACAACAGCCTGCCGGCAGCC
TCGTCGTCCGTAGTGGCGGCGGAATCCGTGCAGACGGAGGGCGGCTCTCTTCCGACGCTGGGACGAAATCGCGAA
TTTGAGGGGCTTTTTGGTGTGTACACGCACAACAAGTCACCGCTCAAGAAGACGTTTACCGTGGACGACTTGATC
GATCAGCCGCTACCGAAAACCTCGAGAGAGATGGCAGCCTGGGAGCAGCATCCCCTGCGGGGGTCGGTCAGCCCG
AAGAAGCAATCCAGCTCCCACAAGGCACTCACTGTCAGTGGGGAGGCACAACCCAACTCGTTGGCCGATACGGGC
AGACCTAGGCCGCAGTATGAGAGATACCCGTCACGATGGTAA
Gene >Ophcf2|03973
ATGCCCCGGCTCGTACGTCGAAAGCCCCTTCGGGAGCGCATAGCCGCAATGCTCAACCCCATGGATCTCCTTCTG
TGGCTGTCGGAGGAGGTCGAGACGAGAGAGTGGGATTCGCAGTTGGTGGGAACGCAGCTCGGGCTGGGCCTCAAC
TCCATTTTATTACTGGCGAGAGCCAACTCGGCTTCTGTCGCGCCGTTAGCCAACGATGATCTGTTTGGTGAAGGT
GCTACGTCGAGCTGGGTATCTCTTTTTGTGAGTCTTTCCAACCTTTTTCCCGTCTGATGCCGTTGCTGACCCGTT
GTTCTTGTTTGCTCCCAGGTCCTGCCTCTCGTTTGGGCTCTCGTCATCCTTTCTCTTACCAATGCTTTTTACGCG
TTTTGCCGGACGAGATCCTACCGTCTCTTCCAGGTCAGCGTCGACAAGCGCCCTGCCACGCCTTCGGCACGACGC
GTCAAGGTTCATTCATCGCCCGCCTCGTCCTCGCCGCTTCGTCTCTTGGCGGATATGGTGACCTCCCAGTCCGCC
GAGTCACGAGCCCATCCGGACAAGGACAAGGACGTGTGGGAGATAGCCGTCTGGGATCCGCTACCCATGTCTATG
CGCCTCCTTTGCTTCTTCAGCCCAGGTCACGTCCTCGTCTATCTGCTCTTTCTCCCGCTCGCCCCTCTCGATCCC
CGTCCCAGCATGACGGTCTTCAACAGCCTCGTGATGCAACTCTTGCTGACGGTCCAAATGCTTCTAATCTGCCAG
CGCTTCGGTCAGCAGGGCAAGGATAATACCATCATTCAGAAGGAAGTCATGCGCGAGTACGATGCAAAATTTGTC
CATCCCCGTCTGTATCCGGTTGTTCGCGACGTGGGGACCCAGATGTCTGAAGATGAGACTACTGAATTCGTGCAC
ATCGGCTCACCTACGACGCTCCTCCGTCGCGGCTTCAAGACACACGGCAACCCGCACATCGACATGCCGGAGCCG
ACGACTACCAGCGGATACATGAAGCCGCGGATGTTTACGTCTCCCGCCGCCAGCCGACGAGTCGAGACCTTGGCA
CCCTCAGGCCTTCGCGGCACGGGCCTTCGCGGCACGGGCCTACGCAACAACAGCCTGCCGGCAGCCTCGTCGTCC
GTAGTGGCGGCGGAATCCGTGCAGACGGAGGGCGGCTCTCTTCCGACGCTGGGACGAAATCGCGAATTTGAGGGG
CTTTTTGGTGTGTACACGCACAACAAGTCACCGCTCAAGAAGACGTTTACCGTGGACGACTTGATCGATCAGCCG
CTACCGAAAACCTCGAGAGAGATGGCAGCCTGGGAGCAGCATCCCCTGCGGGGGTCGGTCAGCCCGAAGAAGCAA
TCCAGCTCCCACAAGGCACTCACTGTCAGTGGGGAGGCACAACCCAACTCGTTGGCCGATACGGGCAGACCTAGG
CCGCAGTATGAGAGATACCCGTCACGATGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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