© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|03968 |
| Gene name | |
| Location | scaffold_04:512097..513583 |
| Strand | + |
| Gene length (bp) | 1486 |
| Transcript length (bp) | 1362 |
| Coding sequence length (bp) | 1362 |
| Protein length (aa) | 454 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00953 | Glycos_transf_4 | Glycosyl transferase family 4 | 3.5E-30 | 133 | 306 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008963 | phospho-N-acetylmuramoyl-pentapeptide-transferase activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | No |
| GO:0003824 | catalytic activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups | No |
| GO:0016740 | transferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 39 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 47 | 69 | 22 |
| 2 | 164 | 186 | 22 |
| 3 | 201 | 223 | 22 |
| 4 | 230 | 249 | 19 |
| 5 | 259 | 281 | 22 |
| 6 | 294 | 316 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|03968 MRPPPSNHQNVLHLHPHPPETLTLTALSTTALATLTHAIRTQGEPPLAASFALSLGAFALCYAMIRWLGPTFMRA GLRGRDMGKVGGGEIPEGWGLFATSGGGNRDVVVEVQVLHEGRFLHRFPHNKLASYLGAIISLQTISLLGIGDDL FDIRWRHKWWIPGLASVPLLVVYLVDFGVTSVVIPLQLRPYLGDLFDLGSLYYVYMACVAMFCPQSINMLAGING IEVSQCLAVAALLSFNDALYLLTPYPHPATDSHLFSLYLLLPWIGVSAALLCHNWYPARVFVGDTYCYFSGMVFA VVGILGHFSKTLGLLLVPQIFNFLYSCPQIFGIIPCPRHRLPRLNPKTGKMEPSVVTWEPNHQPHPLVARALHLL AAFRLVRLTHDEKGRLTESSNFTLINLWLIWRGPLREPRLAAELTALQLVVGLFGLFVRHRLALVVFKEDNWGTT ARS* |
| Coding | >Ophcf2|03968 ATGCGCCCACCCCCCTCTAACCACCAAAATGTCCTCCACCTCCACCCTCACCCTCCCGAAACCCTCACCCTGACA GCCCTCTCAACCACCGCCCTCGCAACCCTCACCCACGCAATCCGCACCCAAGGCGAACCACCACTGGCCGCCTCG TTCGCCCTCTCGCTCGGCGCCTTCGCGCTATGCTACGCCATGATCCGCTGGCTGGGGCCTACCTTTATGCGCGCG GGACTGCGGGGGAGGGACATGGGCAAGGTTGGCGGCGGGGAGATTCCGGAGGGATGGGGGCTGTTTGCTACTTCC GGGGGCGGGAATCGCGATGTTGTCGTTGAGGTTCAGGTTCTGCACGAGGGGAGGTTCCTCCATCGCTTCCCTCAT AACAAGCTTGCATCCTACCTCGGCGCCATCATCTCCCTGCAAACAATCTCCCTCCTCGGCATAGGCGACGACCTC TTCGACATCCGCTGGCGTCACAAATGGTGGATCCCCGGTCTAGCCTCCGTCCCCCTTCTCGTCGTCTACCTCGTC GACTTCGGCGTCACCTCTGTCGTCATCCCTCTTCAACTACGCCCCTATCTAGGCGACCTCTTCGATCTCGGCTCA CTCTACTATGTCTACATGGCCTGCGTCGCCATGTTCTGCCCGCAAAGCATCAACATGCTCGCCGGCATAAACGGC ATCGAAGTATCACAATGTCTAGCCGTCGCCGCTCTCCTCTCCTTCAACGATGCCCTCTACCTCCTGACCCCTTAC CCCCACCCAGCCACAGACTCGCACCTCTTCTCCCTCTACCTCCTCCTCCCCTGGATCGGCGTATCGGCCGCCCTC CTCTGTCACAACTGGTATCCCGCAAGAGTCTTCGTCGGCGACACCTACTGCTACTTCTCCGGCATGGTCTTCGCC GTCGTCGGAATCCTAGGCCACTTCTCCAAAACGCTCGGCCTCCTCCTCGTCCCCCAAATCTTCAACTTCCTCTAC TCATGCCCCCAAATCTTCGGCATAATCCCCTGTCCCCGCCACCGGCTCCCCCGCCTCAACCCCAAGACGGGCAAA ATGGAACCCTCCGTCGTCACCTGGGAGCCCAACCACCAGCCTCACCCCCTCGTCGCTCGCGCCCTACACCTCCTC GCCGCCTTCCGTCTCGTGCGCCTCACCCACGATGAAAAGGGCCGTCTCACCGAGTCGTCAAATTTCACCCTCATC AACCTCTGGCTCATCTGGCGCGGACCTCTCCGTGAGCCTCGTCTCGCCGCCGAGTTGACGGCCCTTCAACTCGTC GTCGGCCTCTTCGGTCTCTTTGTTCGCCACCGGCTGGCCCTCGTTGTCTTTAAGGAAGACAACTGGGGAACCACC GCCCGGTCGTGA |
| Transcript | >Ophcf2|03968 ATGCGCCCACCCCCCTCTAACCACCAAAATGTCCTCCACCTCCACCCTCACCCTCCCGAAACCCTCACCCTGACA GCCCTCTCAACCACCGCCCTCGCAACCCTCACCCACGCAATCCGCACCCAAGGCGAACCACCACTGGCCGCCTCG TTCGCCCTCTCGCTCGGCGCCTTCGCGCTATGCTACGCCATGATCCGCTGGCTGGGGCCTACCTTTATGCGCGCG GGACTGCGGGGGAGGGACATGGGCAAGGTTGGCGGCGGGGAGATTCCGGAGGGATGGGGGCTGTTTGCTACTTCC GGGGGCGGGAATCGCGATGTTGTCGTTGAGGTTCAGGTTCTGCACGAGGGGAGGTTCCTCCATCGCTTCCCTCAT AACAAGCTTGCATCCTACCTCGGCGCCATCATCTCCCTGCAAACAATCTCCCTCCTCGGCATAGGCGACGACCTC TTCGACATCCGCTGGCGTCACAAATGGTGGATCCCCGGTCTAGCCTCCGTCCCCCTTCTCGTCGTCTACCTCGTC GACTTCGGCGTCACCTCTGTCGTCATCCCTCTTCAACTACGCCCCTATCTAGGCGACCTCTTCGATCTCGGCTCA CTCTACTATGTCTACATGGCCTGCGTCGCCATGTTCTGCCCGCAAAGCATCAACATGCTCGCCGGCATAAACGGC ATCGAAGTATCACAATGTCTAGCCGTCGCCGCTCTCCTCTCCTTCAACGATGCCCTCTACCTCCTGACCCCTTAC CCCCACCCAGCCACAGACTCGCACCTCTTCTCCCTCTACCTCCTCCTCCCCTGGATCGGCGTATCGGCCGCCCTC CTCTGTCACAACTGGTATCCCGCAAGAGTCTTCGTCGGCGACACCTACTGCTACTTCTCCGGCATGGTCTTCGCC GTCGTCGGAATCCTAGGCCACTTCTCCAAAACGCTCGGCCTCCTCCTCGTCCCCCAAATCTTCAACTTCCTCTAC TCATGCCCCCAAATCTTCGGCATAATCCCCTGTCCCCGCCACCGGCTCCCCCGCCTCAACCCCAAGACGGGCAAA ATGGAACCCTCCGTCGTCACCTGGGAGCCCAACCACCAGCCTCACCCCCTCGTCGCTCGCGCCCTACACCTCCTC GCCGCCTTCCGTCTCGTGCGCCTCACCCACGATGAAAAGGGCCGTCTCACCGAGTCGTCAAATTTCACCCTCATC AACCTCTGGCTCATCTGGCGCGGACCTCTCCGTGAGCCTCGTCTCGCCGCCGAGTTGACGGCCCTTCAACTCGTC GTCGGCCTCTTCGGTCTCTTTGTTCGCCACCGGCTGGCCCTCGTTGTCTTTAAGGAAGACAACTGGGGAACCACC GCCCGGTCGTGA |
| Gene | >Ophcf2|03968 ATGCGCCCACCCCCCTCTAACCACCAAAATGTCCTCCACCTCCACCCTCACCCTCCCGAAACCCTCACCCTGACA GCCCTCTCAACCACCGCCCTCGCAACCCTCACCCACGCAATCCGCACCCAAGGCGAACCACCACTGGCCGCCTCG TTCGCCCTCTCGCTCGGCGCCTTCGCGCTATGCTACGCCATGATCCGCTGGCTGGGGCCTACCTTTATGCGCGCG GGACTGCGGGGGAGGGACATGGGCAAGGTTGGCGGCGGGGAGATTCCGGAGGGATGGGGGCTGTTTGTGCGGTGG TGTACTTGCTCGCTGTCATTGTCTTTATTCCCCTGGGGTTTTATAAGGATCTTGTGCAGGCTACTTCCGGGGGCG GGAATCGCGATGTTGTCGTTGAGGTTCAGGTTCTGCACGAGGGGAGGTTCCTCCATCGCTTCCCTCATAACAAGG TATGCGACCCCTCTCAACCATCCTCTTTCCCATCCCATCCATCTCAACCTTGCAGCTTGCATCCTACCTCGGCGC CATCATCTCCCTGCAAACAATCTCCCTCCTCGGCATAGGCGACGACCTCTTCGACATCCGCTGGCGTCACAAATG GTGGATCCCCGGTCTAGCCTCCGTCCCCCTTCTCGTCGTCTACCTCGTCGACTTCGGCGTCACCTCTGTCGTCAT CCCTCTTCAACTACGCCCCTATCTAGGCGACCTCTTCGATCTCGGCTCACTCTACTATGTCTACATGGCCTGCGT CGCCATGTTCTGCCCGCAAAGCATCAACATGCTCGCCGGCATAAACGGCATCGAAGTATCACAATGTCTAGCCGT CGCCGCTCTCCTCTCCTTCAACGATGCCCTCTACCTCCTGACCCCTTACCCCCACCCAGCCACAGACTCGCACCT CTTCTCCCTCTACCTCCTCCTCCCCTGGATCGGCGTATCGGCCGCCCTCCTCTGTCACAACTGGTATCCCGCAAG AGTCTTCGTCGGCGACACCTACTGCTACTTCTCCGGCATGGTCTTCGCCGTCGTCGGAATCCTAGGCCACTTCTC CAAAACGCTCGGCCTCCTCCTCGTCCCCCAAATCTTCAACTTCCTCTACTCATGCCCCCAAATCTTCGGCATAAT CCCCTGTCCCCGCCACCGGCTCCCCCGCCTCAACCCCAAGACGGGCAAAATGGAACCCTCCGTCGTCACCTGGGA GCCCAACCACCAGCCTCACCCCCTCGTCGCTCGCGCCCTACACCTCCTCGCCGCCTTCCGTCTCGTGCGCCTCAC CCACGATGAAAAGGGCCGTCTCACCGAGTCGTCAAATTTCACCCTCATCAACCTCTGGCTCATCTGGCGCGGACC TCTCCGTGAGCCTCGTCTCGCCGCCGAGTTGACGGCCCTTCAACTCGTCGTCGGCCTCTTCGGTCTCTTTGTTCG CCACCGGCTGGCCCTCGTTGTCTTTAAGGAAGACAACTGGGGAACCACCGCCCGGTCGTGA |