Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|03960
Gene name
Locationscaffold_04:491534..493335
Strand+
Gene length (bp)1801
Transcript length (bp)1683
Coding sequence length (bp)1683
Protein length (aa) 561

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03619 Solute_trans_a Organic solute transporter Ostalpha 7.5E-94 16 283

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.5

Transmembrane Domains

Domain # Start End Length
1 15 36 21
2 49 71 22
3 86 108 22
4 147 166 19
5 181 203 22
6 216 238 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|03960
MMASGGTGQKFTYATTVVAGVASLAATLLSVLSIWLQAKNYRKPLLQRYVIRILVMVPIYSIASWASMVSSTTAA
FLDPIRDIYEAFTIYTFFQLLINYLGGERALIIMTHGRAPVQHLWPLNHVLRPVDISDPHSFLSIKRGILQYAWL
KPLLSLATIIMKATGTYQEGYIGAGSGYLWSGIIYNISVTVSLYSLGLFWVCMHHDLQPFRPVPKFLCIKLIIFA
SYWQGFFLSILVWLGAIPDDVEGYTRDNLAAAIQDFLICLEMPAFAVAHWYAFSWHDFANNNILSARMPLNYALK
DAFGARDLIQDSKDTFRGSKYGYRAFDSGDKVMAHEESRSRLARLEEGMRYERGGKGKYWIPKPEEINAASPLLG
SQGEPSSSRPDQINENQHGTFDEPELDGTDEGLFSAARLLEFGDWNYPVITASEPLSSRYRPSRENLGLGSPGWT
VSSSASVADPSGRVPNADEIASAANPPQVVPIKKKKKKKVVKHAKPDPSTLGLDREAATSSAADQSHADESEAPQ
ATRPAERAEEQAENEESRCNMPDGDEFRNVWGRDS*
Coding >Ophcf2|03960
ATGATGGCCTCAGGAGGAACCGGCCAGAAGTTCACCTACGCCACGACGGTGGTGGCAGGGGTCGCCTCTCTGGCA
GCGACTCTGCTCTCAGTCCTATCCATATGGCTTCAGGCAAAGAACTACCGAAAGCCCCTCCTCCAGCGCTATGTC
ATCCGAATCCTCGTCATGGTGCCCATCTACTCCATTGCTTCGTGGGCTAGCATGGTGTCTTCTACCACAGCTGCC
TTTCTCGATCCTATTCGAGACATTTACGAGGCTTTCACCATCTACACCTTCTTCCAGCTTCTCATCAACTACCTG
GGCGGGGAGCGGGCCTTGATAATAATGACGCACGGTCGTGCCCCCGTCCAGCATCTGTGGCCCTTGAACCATGTG
CTTCGTCCGGTCGACATCTCGGATCCGCATAGCTTTCTGTCTATCAAGCGTGGCATCTTGCAATATGCATGGCTC
AAGCCCTTACTTTCCCTTGCGACCATCATCATGAAGGCCACGGGCACGTATCAGGAGGGCTACATCGGTGCCGGC
TCTGGGTACTTGTGGAGTGGCATCATCTATAACATCAGCGTCACTGTCAGTCTCTACTCGCTGGGCTTATTCTGG
GTGTGCATGCATCATGACCTGCAGCCGTTCCGGCCAGTCCCCAAGTTCCTCTGCATCAAGCTCATCATCTTTGCC
TCGTACTGGCAAGGCTTCTTCTTGTCAATCCTCGTCTGGCTCGGGGCCATCCCCGACGATGTGGAAGGATACACA
CGCGACAACCTCGCCGCTGCCATACAGGATTTCTTGATCTGCCTCGAGATGCCGGCCTTTGCCGTGGCGCATTGG
TATGCCTTCTCGTGGCACGACTTTGCCAACAACAACATCCTCTCTGCGCGGATGCCGCTCAACTACGCCCTGAAG
GACGCCTTTGGAGCCAGGGATCTGATTCAGGACTCCAAAGACACCTTCCGTGGTAGCAAGTATGGCTACAGGGCA
TTCGACTCTGGTGACAAGGTCATGGCTCACGAGGAGTCGAGATCGAGGCTCGCCAGGCTCGAGGAGGGCATGCGC
TACGAAAGAGGAGGCAAAGGTAAGTATTGGATACCAAAGCCGGAAGAAATCAACGCGGCCTCCCCGCTGCTGGGC
TCTCAAGGCGAGCCGAGTTCTTCGCGCCCCGACCAAATCAATGAGAACCAGCACGGCACCTTTGACGAGCCGGAG
CTGGATGGAACGGACGAGGGCTTGTTCAGCGCGGCGCGGCTTCTGGAGTTTGGAGACTGGAACTATCCCGTAATC
ACCGCCAGCGAGCCGTTGAGCAGTAGATATCGGCCATCGAGGGAGAATTTGGGACTTGGTTCCCCCGGATGGACA
GTCTCCTCTTCAGCATCGGTTGCCGACCCGTCAGGCAGAGTGCCGAACGCGGACGAGATCGCGTCTGCCGCCAAT
CCACCGCAGGTTGTTCCAATCAAGAAGAAGAAAAAGAAGAAGGTGGTGAAACACGCCAAGCCTGACCCGTCCACA
TTGGGTCTCGATCGTGAAGCCGCAACTTCTTCGGCAGCTGACCAAAGCCATGCGGACGAATCCGAGGCACCACAA
GCAACACGACCGGCCGAGAGAGCAGAAGAGCAGGCCGAGAACGAAGAGTCTCGATGCAACATGCCAGATGGCGAC
GAGTTCCGCAATGTCTGGGGTAGAGATTCGTGA
Transcript >Ophcf2|03960
ATGATGGCCTCAGGAGGAACCGGCCAGAAGTTCACCTACGCCACGACGGTGGTGGCAGGGGTCGCCTCTCTGGCA
GCGACTCTGCTCTCAGTCCTATCCATATGGCTTCAGGCAAAGAACTACCGAAAGCCCCTCCTCCAGCGCTATGTC
ATCCGAATCCTCGTCATGGTGCCCATCTACTCCATTGCTTCGTGGGCTAGCATGGTGTCTTCTACCACAGCTGCC
TTTCTCGATCCTATTCGAGACATTTACGAGGCTTTCACCATCTACACCTTCTTCCAGCTTCTCATCAACTACCTG
GGCGGGGAGCGGGCCTTGATAATAATGACGCACGGTCGTGCCCCCGTCCAGCATCTGTGGCCCTTGAACCATGTG
CTTCGTCCGGTCGACATCTCGGATCCGCATAGCTTTCTGTCTATCAAGCGTGGCATCTTGCAATATGCATGGCTC
AAGCCCTTACTTTCCCTTGCGACCATCATCATGAAGGCCACGGGCACGTATCAGGAGGGCTACATCGGTGCCGGC
TCTGGGTACTTGTGGAGTGGCATCATCTATAACATCAGCGTCACTGTCAGTCTCTACTCGCTGGGCTTATTCTGG
GTGTGCATGCATCATGACCTGCAGCCGTTCCGGCCAGTCCCCAAGTTCCTCTGCATCAAGCTCATCATCTTTGCC
TCGTACTGGCAAGGCTTCTTCTTGTCAATCCTCGTCTGGCTCGGGGCCATCCCCGACGATGTGGAAGGATACACA
CGCGACAACCTCGCCGCTGCCATACAGGATTTCTTGATCTGCCTCGAGATGCCGGCCTTTGCCGTGGCGCATTGG
TATGCCTTCTCGTGGCACGACTTTGCCAACAACAACATCCTCTCTGCGCGGATGCCGCTCAACTACGCCCTGAAG
GACGCCTTTGGAGCCAGGGATCTGATTCAGGACTCCAAAGACACCTTCCGTGGTAGCAAGTATGGCTACAGGGCA
TTCGACTCTGGTGACAAGGTCATGGCTCACGAGGAGTCGAGATCGAGGCTCGCCAGGCTCGAGGAGGGCATGCGC
TACGAAAGAGGAGGCAAAGGTAAGTATTGGATACCAAAGCCGGAAGAAATCAACGCGGCCTCCCCGCTGCTGGGC
TCTCAAGGCGAGCCGAGTTCTTCGCGCCCCGACCAAATCAATGAGAACCAGCACGGCACCTTTGACGAGCCGGAG
CTGGATGGAACGGACGAGGGCTTGTTCAGCGCGGCGCGGCTTCTGGAGTTTGGAGACTGGAACTATCCCGTAATC
ACCGCCAGCGAGCCGTTGAGCAGTAGATATCGGCCATCGAGGGAGAATTTGGGACTTGGTTCCCCCGGATGGACA
GTCTCCTCTTCAGCATCGGTTGCCGACCCGTCAGGCAGAGTGCCGAACGCGGACGAGATCGCGTCTGCCGCCAAT
CCACCGCAGGTTGTTCCAATCAAGAAGAAGAAAAAGAAGAAGGTGGTGAAACACGCCAAGCCTGACCCGTCCACA
TTGGGTCTCGATCGTGAAGCCGCAACTTCTTCGGCAGCTGACCAAAGCCATGCGGACGAATCCGAGGCACCACAA
GCAACACGACCGGCCGAGAGAGCAGAAGAGCAGGCCGAGAACGAAGAGTCTCGATGCAACATGCCAGATGGCGAC
GAGTTCCGCAATGTCTGGGGTAGAGATTCGTGA
Gene >Ophcf2|03960
ATGATGGCCTCAGGAGGAACCGGCCAGAAGTTCACCTACGCCACGACGGTGGTGGCAGGGGTCGCCTCTCTGGCA
GCGACTCTGCTCTCAGTCCTGTACGTCGGCTAACCTCCCCGACCTCTGAGGCACAGAAGGCATATGCTGATACGT
CCCGTGAAATAGATCCATATGGCTTCAGGCAAAGAACTACCGAAAGCCCCTCCTCCAGCGCTATGTCATCCGAAT
CCTCGTCATGGTGCCCATCTACTCCATTGCTTCGTGGGCTAGCATGGTGTCTTCTACCACAGCTGCCTTTCTCGA
TCCTATTCGAGACATTTACGAGGCTTTCACCATCTACACCTTCTTCCAGCTTCTCATCAACTACCTGGGCGGGGA
GCGGGCCTTGATAATAATGACGCACGGTCGTGCCCCCGTCCAGCATCTGTGGCCCTTGAACCATGTGCTTCGTCC
GGTCGACATCTCGGATCCGCATAGCTTTCTGTCTATCAAGCGTGGCATCTTGCAATATGCATGGCTCAAGCCCTT
ACTTTCCCTTGCGACCATCATCATGAAGGCCACGGGCACGTATCAGGAGGGCTACATCGGTGCCGGCTCTGGGTA
CTTGTGGAGTGGCATCATCTATAACATCAGCGTCACTGTCAGTCTCTACTCGCTGGGCTTATTCTGGGTGTGCAT
GCATCATGACCTGCAGCCGTTCCGGCCAGTCCCCAAGTTCCTCTGCATCAAGCTCATCATCTTTGCCTCGTACTG
GCAAGGCTTCTTCTTGTCAATCCTCGTCTGGCTCGGGGCCATCCCCGACGATGTGGAAGGATACACACGCGACAA
CCTCGCCGCTGCCATACAGGATTTCTTGATCTGCCTCGAGATGCCGGCCTTTGCCGTGGCGCATTGGTATGCCTT
CTCGTGGCACGACTTTGCCAACAACAACATCCTCTCTGCGCGGATGCCGCTCAACTACGCCCTGAAGGACGCCTT
TGGAGCCAGGGATCTGATTCAGGACTCCAAAGACACCTTCCGTGGTAGCAAGTATGGCTACAGGGCATTCGACTC
TGGTGACAAGGTCATGGCTCACGAGGAGTCGAGATCGAGGCTCGCCAGGCTCGAGGAGGGCATGCGCTACGAAAG
AGGAGGCAAAGGTAAGTATTGGATACCAAAGCCGGAAGAAATCAACGCGGCCTCCCCGCTGCTGGGCTCTCAAGG
CGAGCCGAGTTCTTCGCGCCCCGACCAAATCAATGAGAACCAGCACGGCACCTTTGACGAGCCGGAGCTGGATGG
AACGGACGAGGGCTTGTTCAGCGCGGCGCGGCTTCTGGAGTTTGGAGACTGGAACGTGAGTGCCGGCCCCTCTCG
ACCTCGTTTCAAACTGACGATTCGGCACTAGTATCCCGTAATCACCGCCAGCGAGCCGTTGAGCAGTAGATATCG
GCCATCGAGGGAGAATTTGGGACTTGGTTCCCCCGGATGGACAGTCTCCTCTTCAGCATCGGTTGCCGACCCGTC
AGGCAGAGTGCCGAACGCGGACGAGATCGCGTCTGCCGCCAATCCACCGCAGGTTGTTCCAATCAAGAAGAAGAA
AAAGAAGAAGGTGGTGAAACACGCCAAGCCTGACCCGTCCACATTGGGTCTCGATCGTGAAGCCGCAACTTCTTC
GGCAGCTGACCAAAGCCATGCGGACGAATCCGAGGCACCACAAGCAACACGACCGGCCGAGAGAGCAGAAGAGCA
GGCCGAGAACGAAGAGTCTCGATGCAACATGCCAGATGGCGACGAGTTCCGCAATGTCTGGGGTAGAGATTCGTG
A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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