© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|03943 |
| Gene name | |
| Location | scaffold_04:421979..423885 |
| Strand | + |
| Gene length (bp) | 1906 |
| Transcript length (bp) | 1836 |
| Coding sequence length (bp) | 1836 |
| Protein length (aa) | 612 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | 0.4136 | 0.5279 | 0.0359 | 0.1899 | 0.2596 | 0.0575 | 0.4524 | 0.1784 | 0.1494 | 0.0418 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 413 | 435 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 4730 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|03943 MVFSGLLSPSGDKASSASRSRSGSDGLIYDEAQLPCVPPERPNLRDLNNSLEALAAVFPDVQMDVFRELLTKFDG ESRLALVAEALLKNRVAWVKGRWRTVTEDGGGGGGGGGGGGGVCKADSFRSPEYAQAVRTLAWHEFRGLSRSTIN AVLAESNHSYLDARRTLVALSSQSWRFTISSMLRRRKPMGTGESERHPLVLWRAIGGGGVMIPAIRPTGSAELDR ELFDALVRPLQARERRARDAADRRLALQLNQDEADRAGALHECSCCFSTAVFEQFTCCNEAGHMMCFRCVLQATK EALFGQSWLSSIKMDTGTLRCLAVEGDGCSGYIPGDQLRRALTADDDDKDDDDDDDDEHAAGAEMARRLDERLAE HNLATSRLALTRCPFCSYSEVDEASLRGARPRFTMGAMAMLAVLAAMLLLSLPVALLSALACAMMGSERRAWRMA RMSWQRAVSRVQRRRRGLRFRCRSPRCGRWSCLSCHKAWTDVHICHESSLLALRTQVEQAMSMAIKRVCPRCDTC FVKNSGCNKLTCPCGYKMCYVCRADLGEVGYRHFCDHFRPEADAAAACRECDRCNLWEVEDEDRVLAEARDEAER RWKEGEGRVGG* |
| Coding | >Ophcf2|03943 ATGGTCTTCTCCGGGCTGCTCTCCCCGAGCGGCGATAAGGCGTCGTCAGCGAGCCGCAGCCGGTCCGGAAGCGAC GGACTGATCTACGACGAGGCACAGCTGCCATGCGTACCGCCAGAGCGACCGAATCTGCGGGATCTCAACAACAGC CTGGAGGCGCTGGCAGCCGTCTTCCCGGACGTGCAGATGGACGTTTTCCGCGAGCTGCTGACCAAGTTTGACGGC GAGTCGCGGCTGGCTCTCGTTGCCGAGGCTCTGCTCAAGAACCGAGTGGCGTGGGTCAAGGGACGGTGGCGGACG GTGACGGAGGACGGAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGCGTTTGCAAGGCCGACTCGTTTCGC AGCCCCGAGTACGCGCAGGCGGTTCGGACGCTGGCGTGGCACGAGTTTCGCGGCTTGTCGCGATCGACGATCAAC GCGGTGCTGGCCGAGTCGAACCATTCGTATCTCGATGCCAGGCGTACGCTCGTGGCGCTGTCTTCGCAGTCGTGG CGCTTCACCATCTCGTCGATGCTGCGGAGACGGAAGCCCATGGGCACGGGCGAGTCGGAACGACACCCTCTGGTG CTGTGGCGGGCGATTGGCGGCGGAGGAGTCATGATTCCGGCGATTCGACCGACAGGGAGTGCCGAGCTGGACCGC GAACTGTTCGACGCCCTCGTTCGACCTCTTCAGGCGAGAGAGCGAAGGGCTCGTGACGCGGCGGATCGTCGACTT GCCCTTCAGCTGAATCAGGACGAGGCCGATAGGGCTGGGGCTTTACACGAGTGCTCGTGTTGCTTCTCTACGGCC GTGTTCGAGCAGTTTACGTGCTGTAACGAAGCGGGACACATGATGTGCTTCCGCTGCGTGCTGCAAGCCACCAAG GAGGCTCTATTCGGACAGTCTTGGCTAAGCAGCATCAAGATGGACACGGGGACCCTCCGATGCCTAGCTGTTGAA GGCGACGGCTGCAGCGGCTACATTCCCGGAGACCAGCTTCGACGGGCACTGACAGCCGATGACGACGACAAGGAC GACGACGACGACGACGACGACGAACACGCGGCTGGTGCGGAAATGGCGCGACGACTGGACGAGCGGCTTGCAGAG CACAACCTGGCGACGTCTAGGCTGGCGCTGACGCGGTGTCCCTTTTGCAGCTACAGCGAGGTGGACGAGGCGAGC TTAAGGGGAGCAAGACCGCGGTTCACGATGGGGGCCATGGCCATGCTGGCGGTATTGGCTGCCATGCTGCTCCTT TCACTGCCCGTCGCTCTCCTTTCGGCCCTGGCCTGCGCCATGATGGGCTCGGAAAGACGGGCGTGGCGGATGGCA CGGATGAGCTGGCAGCGGGCCGTCAGCCGAGTGCAACGGCGTCGACGCGGCCTCCGCTTCCGCTGTCGAAGCCCT CGATGCGGAAGATGGTCATGTCTCTCGTGTCACAAGGCCTGGACGGACGTTCACATCTGCCACGAATCCTCGCTG CTGGCCCTACGAACGCAGGTGGAACAAGCCATGAGCATGGCCATCAAGCGCGTGTGCCCCCGCTGCGACACTTGC TTCGTCAAGAACTCGGGCTGCAACAAGCTGACGTGTCCGTGCGGCTACAAGATGTGTTACGTCTGCCGCGCCGAT CTCGGAGAGGTGGGATACAGGCATTTCTGCGATCACTTCCGGCCCGAGGCCGATGCCGCGGCCGCGTGCCGGGAA TGTGATCGCTGTAACCTGTGGGAGGTGGAGGATGAGGATCGCGTGCTGGCGGAGGCGAGGGACGAGGCGGAGAGG AGGTGGAAGGAAGGGGAGGGGAGGGTTGGTGGTTGA |
| Transcript | >Ophcf2|03943 ATGGTCTTCTCCGGGCTGCTCTCCCCGAGCGGCGATAAGGCGTCGTCAGCGAGCCGCAGCCGGTCCGGAAGCGAC GGACTGATCTACGACGAGGCACAGCTGCCATGCGTACCGCCAGAGCGACCGAATCTGCGGGATCTCAACAACAGC CTGGAGGCGCTGGCAGCCGTCTTCCCGGACGTGCAGATGGACGTTTTCCGCGAGCTGCTGACCAAGTTTGACGGC GAGTCGCGGCTGGCTCTCGTTGCCGAGGCTCTGCTCAAGAACCGAGTGGCGTGGGTCAAGGGACGGTGGCGGACG GTGACGGAGGACGGAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGCGTTTGCAAGGCCGACTCGTTTCGC AGCCCCGAGTACGCGCAGGCGGTTCGGACGCTGGCGTGGCACGAGTTTCGCGGCTTGTCGCGATCGACGATCAAC GCGGTGCTGGCCGAGTCGAACCATTCGTATCTCGATGCCAGGCGTACGCTCGTGGCGCTGTCTTCGCAGTCGTGG CGCTTCACCATCTCGTCGATGCTGCGGAGACGGAAGCCCATGGGCACGGGCGAGTCGGAACGACACCCTCTGGTG CTGTGGCGGGCGATTGGCGGCGGAGGAGTCATGATTCCGGCGATTCGACCGACAGGGAGTGCCGAGCTGGACCGC GAACTGTTCGACGCCCTCGTTCGACCTCTTCAGGCGAGAGAGCGAAGGGCTCGTGACGCGGCGGATCGTCGACTT GCCCTTCAGCTGAATCAGGACGAGGCCGATAGGGCTGGGGCTTTACACGAGTGCTCGTGTTGCTTCTCTACGGCC GTGTTCGAGCAGTTTACGTGCTGTAACGAAGCGGGACACATGATGTGCTTCCGCTGCGTGCTGCAAGCCACCAAG GAGGCTCTATTCGGACAGTCTTGGCTAAGCAGCATCAAGATGGACACGGGGACCCTCCGATGCCTAGCTGTTGAA GGCGACGGCTGCAGCGGCTACATTCCCGGAGACCAGCTTCGACGGGCACTGACAGCCGATGACGACGACAAGGAC GACGACGACGACGACGACGACGAACACGCGGCTGGTGCGGAAATGGCGCGACGACTGGACGAGCGGCTTGCAGAG CACAACCTGGCGACGTCTAGGCTGGCGCTGACGCGGTGTCCCTTTTGCAGCTACAGCGAGGTGGACGAGGCGAGC TTAAGGGGAGCAAGACCGCGGTTCACGATGGGGGCCATGGCCATGCTGGCGGTATTGGCTGCCATGCTGCTCCTT TCACTGCCCGTCGCTCTCCTTTCGGCCCTGGCCTGCGCCATGATGGGCTCGGAAAGACGGGCGTGGCGGATGGCA CGGATGAGCTGGCAGCGGGCCGTCAGCCGAGTGCAACGGCGTCGACGCGGCCTCCGCTTCCGCTGTCGAAGCCCT CGATGCGGAAGATGGTCATGTCTCTCGTGTCACAAGGCCTGGACGGACGTTCACATCTGCCACGAATCCTCGCTG CTGGCCCTACGAACGCAGGTGGAACAAGCCATGAGCATGGCCATCAAGCGCGTGTGCCCCCGCTGCGACACTTGC TTCGTCAAGAACTCGGGCTGCAACAAGCTGACGTGTCCGTGCGGCTACAAGATGTGTTACGTCTGCCGCGCCGAT CTCGGAGAGGTGGGATACAGGCATTTCTGCGATCACTTCCGGCCCGAGGCCGATGCCGCGGCCGCGTGCCGGGAA TGTGATCGCTGTAACCTGTGGGAGGTGGAGGATGAGGATCGCGTGCTGGCGGAGGCGAGGGACGAGGCGGAGAGG AGGTGGAAGGAAGGGGAGGGGAGGGTTGGTGGTTGA |
| Gene | >Ophcf2|03943 ATGGTCTTCTCCGGGCTGCTCTCCCCGAGCGGCGATAAGGCGTCGTCAGCGAGCCGCAGCCGGTCCGGAAGCGAC GGACTGATCTACGACGAGGCACAGCTGCCATGCGTACCGCCAGAGCGACCGAATCTGCGGGATCTCAACAACAGC CTGGAGGCGCTGGCAGCCGTCTTCCCGGACGTGCAGATGGACGTTTTCCGCGAGCTGCTGACCAAGTTTGACGGC GAGTCGCGGCTGGCTCTCGTTGCCGAGGCTCTGCTCAAGAACCGAGTGGCGTGGGTCAAGGGACGGTGGCGGACG GTGACGGAGGACGGAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGCGTTTGCAAGGCCGACTCGTTTCGC AGCCCCGAGTACGCGCAGGCGGTTCGGACGCTGGCGTGGCACGAGTTTCGCGGCTTGTCGCGATCGACGATCAAC GCGGTGCTGGCCGAGTCGAACCATTCGTATCTCGATGCCAGGCGTACGCTCGTGGCGCTGTCTTCGCAGTCGTGG CGCTTCACCATCTCGTCGATGCTGCGGAGACGGAAGCCCATGGGCACGGGCGAGTCGGAACGACACCCTCTGGTG CTGTGGCGGGCGATTGGCGGCGGAGGAGTCATGATTCCGGCGATTCGACCGACAGGGAGTGCCGAGCTGGACCGC GAACTGTTCGACGCCCTCGTTCGACCTCTTCAGGCGAGAGAGCGAAGGGCTCGTGACGCGGCGGATCGTCGACTT GCCCTTCAGCTGAATCAGGACGAGGCCGATAGGGCTGGGGCTTTACACGAGTGCTCGTGTTGCTTCTCTACGGCC GTGTTCGAGCAGTTTACGTGCTGTAACGAAGCGGGACACATGATGTGCTTCCGCTGCGTGCTGCAAGCCACCAAG GAGGCTCTATTCGGACAGTCTTGGCTAAGCAGCATCAAGATGGACACGGGGACCCTCCGATGCCTAGCTGTTGAA GGCGACGGCTGCAGCGGCTACATTCCCGGAGACCAGCTTCGACGGGCACTGACAGCCGATGACGACGACAAGGAC GACGACGACGACGACGACGACGAACACGCGGCTGGTGCGGAAATGGCGCGACGACTGGACGAGCGGCTTGCAGAG CACAACCTGGCGACGTCTAGGCTGGCGCTGACGCGGTGTCCCTTTTGCAGCTACAGCGAGGTGGACGAGGCGAGC TTAAGGGGAGCAAGACCGCGGTTCACGATGGGGGCCATGGCCATGCTGGCGGTATTGGCTGCCATGCTGCTCCTT TCACTGCCCGTCGCTCTCCTTTCGGCCCTGGCCTGCGCCATGATGGGCTCGGAAAGACGGGCGTGGCGGATGGCA CGGATGAGCTGGCAGCGGGCCGTCAGCCGAGTGCAACGGCGTCGACGCGGCCTCCGCTTCCGCTGTCGAAGCCCT CGATGCGGAAGATGGTCATGTCTCTCGTGTCACAAGGCCTGGACGGACGTTCACATCTGCCACGAATCCTCGCTG CTGGCCCTACGAACGCAGGTGGAACAAGCCATGAGCATGGCCATCAAGCGCGTGTGCCCCCGCTGCGACACTTGC TTCGTCAAGAACTCGGGCTGCAACAAGCTGACGTGTCCGTGCGGCTACAAGATGTGTTACGTCTGCCGCGCCGAT CTCGGAGAGGTGGGATACAGGCATTTCTGCGATCACTTCCGGCCCGAGGCCGATGCCGCGGCCGCGTGCCGGGAA TGTGATCGCTGTAACCTGTGGGAGGTGGAGGATGAGGATCGCGTGCTGGCGGAGGCGAGGGACGAGGCGGAGAGG AGGTGGAAGGAAGGGGAGGGGAGGGGTTGGGGGAGAGGGTTGGGGGGGTTGGGAGGGTTGGCATGGGGTTGCCTT GTTGGGGGGATGTGTTGGAGTTGGTGGTTGA |